RNA–Protein interactions for RNA: ENST00000347559.6

LMNA-201, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 3,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-201ENST00000347559 EXOC3L1Q86VI1 746 aa16.6■□□□□ 0.25
LMNA-201ENST00000347559 COL23A1Q86Y22 540 aaPredicted RBP16.6■□□□□ 0.25
LMNA-201ENST00000347559 SNX29Q8TEQ0 813 aa16.6■□□□□ 0.25
LMNA-201ENST00000347559 PNMA5Q96PV4 448 aa16.6■□□□□ 0.25
LMNA-201ENST00000347559 PPP1R12CQ9BZL4 782 aa16.6■□□□□ 0.25
LMNA-201ENST00000347559 SH3GLB2Q9NR46 395 aa16.6■□□□□ 0.25
LMNA-201ENST00000347559 RPTORQ8N122 1335 aa16.6■□□□□ 0.25
LMNA-201ENST00000347559 BAZ2AQ9UIF9 1905 aaKnown RBP16.6■□□□□ 0.25
LMNA-201ENST00000347559 PYGLP06737 847 aa16.6■□□□□ 0.25
LMNA-201ENST00000347559 ZBTB48P10074 688 aaPredicted RBP16.6■□□□□ 0.25
LMNA-201ENST00000347559 VSIG1Q86XK7 387 aa16.6■□□□□ 0.25
LMNA-201ENST00000347559 GANQ9H2C0 597 aa16.6■□□□□ 0.25
LMNA-201ENST00000347559 RXFP1Q9HBX9 757 aa16.6■□□□□ 0.25
LMNA-201ENST00000347559 KLHL14Q9P2G3 628 aa16.6■□□□□ 0.25
LMNA-201ENST00000347559 BIN2Q9UBW5 565 aaPredicted RBP16.6■□□□□ 0.25
LMNA-201ENST00000347559 PHRF1Q9P1Y6 1649 aaKnown RBP16.6■□□□□ 0.25
LMNA-201ENST00000347559 WTIPA6NIX2 430 aaPredicted RBP16.59■□□□□ 0.25
LMNA-201ENST00000347559 PLCG2P16885 1265 aa16.59■□□□□ 0.25
LMNA-201ENST00000347559 RFC5P40937 340 aa16.59■□□□□ 0.25
LMNA-201ENST00000347559 FAM47EQ6ZV65 393 aa16.59■□□□□ 0.25
LMNA-201ENST00000347559 NEK8Q86SG6 692 aa16.59■□□□□ 0.25
LMNA-201ENST00000347559 ZCRB1Q8TBF4 217 aaKnown RBP16.59■□□□□ 0.25
LMNA-201ENST00000347559 TBCKQ8TEA7 893 aa16.59■□□□□ 0.25
LMNA-201ENST00000347559 ARHGEF2Q92974 986 aaKnown RBP16.59■□□□□ 0.25
LMNA-201ENST00000347559 C18orf8Q96DM3 657 aa16.59■□□□□ 0.25
LMNA-201ENST00000347559 STMN4Q9H169 189 aaPredicted RBP16.59■□□□□ 0.25
LMNA-201ENST00000347559 TMOD4Q9NZQ9 345 aa16.59■□□□□ 0.25
LMNA-201ENST00000347559 PPP1R9AQ9ULJ8 1098 aa16.59■□□□□ 0.25
LMNA-201ENST00000347559 OAS1P00973 400 aaKnown RBP16.59■□□□□ 0.25
LMNA-201ENST00000347559 GH1P01241 217 aa16.59■□□□□ 0.25
LMNA-201ENST00000347559 PTENP60484 403 aa16.59■□□□□ 0.25
LMNA-201ENST00000347559 TFAP4Q01664 338 aa16.59■□□□□ 0.25
LMNA-201ENST00000347559 PLS1Q14651 629 aa16.59■□□□□ 0.25
LMNA-201ENST00000347559 FAM26FQ5R3K3 315 aa16.59■□□□□ 0.25
LMNA-201ENST00000347559 TCERG1LQ5VWI1 586 aa16.59■□□□□ 0.25
LMNA-201ENST00000347559 ZDHHC24Q6UX98 284 aa16.59■□□□□ 0.25
LMNA-201ENST00000347559 ASRGL1Q7L266 308 aa16.59■□□□□ 0.25
LMNA-201ENST00000347559 SYCE1Q8N0S2 351 aa16.59■□□□□ 0.25
LMNA-201ENST00000347559 TBC1D16Q8TBP0 767 aa16.59■□□□□ 0.25
LMNA-201ENST00000347559 NUDCD1Q96RS6 583 aa16.59■□□□□ 0.25
LMNA-201ENST00000347559 TRIM4Q9C037 500 aa16.59■□□□□ 0.25
LMNA-201ENST00000347559 CCDC134Q9H6E4 229 aa16.59■□□□□ 0.25
LMNA-201ENST00000347559 G3BP2Q9UN86 482 aaKnown RBP16.59■□□□□ 0.25
LMNA-201ENST00000347559 CYTH3O43739 400 aa16.59■□□□□ 0.25
LMNA-201ENST00000347559 ACSL3O95573 720 aa16.59■□□□□ 0.25
LMNA-201ENST00000347559 RANBP1P43487 201 aa16.59■□□□□ 0.25
LMNA-201ENST00000347559 COASYQ13057 564 aa16.59■□□□□ 0.25
LMNA-201ENST00000347559 ADAM9Q13443 819 aa16.59■□□□□ 0.25
LMNA-201ENST00000347559 SLC35G1Q2M3R5 365 aa16.59■□□□□ 0.25
LMNA-201ENST00000347559 TRIM59Q8IWR1 403 aa16.59■□□□□ 0.25
LMNA-201ENST00000347559 UTP4Q969X6 686 aaKnown RBP16.59■□□□□ 0.25
LMNA-201ENST00000347559 MTRF1LQ9UGC7 380 aaKnown RBP16.59■□□□□ 0.25
LMNA-201ENST00000347559 PTPN22Q9Y2R2 807 aa16.59■□□□□ 0.25
LMNA-201ENST00000347559 UCHL3P15374 230 aa16.58■□□□□ 0.24
LMNA-201ENST00000347559 MRPS35P82673 323 aaKnown RBP16.58■□□□□ 0.24
LMNA-201ENST00000347559 PDCD2Q16342 344 aaPredicted RBP16.58■□□□□ 0.24
LMNA-201ENST00000347559 DCAF17Q5H9S7 520 aaPredicted RBP16.58■□□□□ 0.24
LMNA-201ENST00000347559 C10orf76Q5T2E6 689 aa16.58■□□□□ 0.24
LMNA-201ENST00000347559 RPUSD2Q8IZ73 545 aaKnown RBP16.58■□□□□ 0.24
LMNA-201ENST00000347559 PROM2Q8N271 834 aa16.58■□□□□ 0.24
LMNA-201ENST00000347559 MARCH10Q8NA82 808 aaPredicted RBP16.58■□□□□ 0.24
LMNA-201ENST00000347559 RAB3IPQ96QF0 476 aaPredicted RBP16.58■□□□□ 0.24
LMNA-201ENST00000347559 PAIP2Q9BPZ3 127 aaKnown RBP16.58■□□□□ 0.24
LMNA-201ENST00000347559 RNPEPL1Q9HAU8 725 aa16.58■□□□□ 0.24
LMNA-201ENST00000347559 BARHL2Q9NY43 387 aa16.58■□□□□ 0.24
LMNA-201ENST00000347559 SMCO2A6NFE2 343 aa16.58■□□□□ 0.24
LMNA-201ENST00000347559 BTNL10A8MVZ5 291 aa16.58■□□□□ 0.24
LMNA-201ENST00000347559 KIAA0391O15091 583 aaKnown RBP16.58■□□□□ 0.24
LMNA-201ENST00000347559 CALB2P22676 271 aa16.58■□□□□ 0.24
LMNA-201ENST00000347559 GJB7Q6PEY0 223 aa16.58■□□□□ 0.24
LMNA-201ENST00000347559 VPS36Q86VN1 386 aa16.58■□□□□ 0.24
LMNA-201ENST00000347559 TGS1Q96RS0 853 aaKnown RBP16.58■□□□□ 0.24
LMNA-201ENST00000347559 BRIP1Q9BX63 1249 aa16.58■□□□□ 0.24
LMNA-201ENST00000347559 SEPT11Q9NVA2 429 aaKnown RBP16.58■□□□□ 0.24
LMNA-201ENST00000347559 RASAL2Q9UJF2 1139 aa16.58■□□□□ 0.24
LMNA-201ENST00000347559 STX8Q9UNK0 236 aa16.58■□□□□ 0.24
LMNA-201ENST00000347559 STXBP5LQ9Y2K9 1186 aa16.58■□□□□ 0.24
LMNA-201ENST00000347559 TARSP26639 723 aaKnown RBP16.57■□□□□ 0.24
LMNA-201ENST00000347559 IGHMBP2P38935 993 aaKnown RBP16.57■□□□□ 0.24
LMNA-201ENST00000347559 RPL21P46778 160 aaKnown RBP16.57■□□□□ 0.24
LMNA-201ENST00000347559 GALCP54803 685 aa16.57■□□□□ 0.24
LMNA-201ENST00000347559 LLGL1Q15334 1064 aa16.57■□□□□ 0.24
LMNA-201ENST00000347559 CALCRLQ16602 461 aa16.57■□□□□ 0.24
LMNA-201ENST00000347559 MUM1Q2TAK8 710 aa16.57■□□□□ 0.24
LMNA-201ENST00000347559 DCAF12L1Q5VU92 463 aa16.57■□□□□ 0.24
LMNA-201ENST00000347559 SEPT14Q6ZU15 432 aa16.57■□□□□ 0.24
LMNA-201ENST00000347559 ARHGAP27Q6ZUM4 889 aa16.57■□□□□ 0.24
LMNA-201ENST00000347559 INTS8Q75QN2 995 aaKnown RBP16.57■□□□□ 0.24
LMNA-201ENST00000347559 PIGOQ8TEQ8 1089 aa16.57■□□□□ 0.24
LMNA-201ENST00000347559 GJA10Q969M2 543 aa16.57■□□□□ 0.24
LMNA-201ENST00000347559 HES6Q96HZ4 224 aa16.57■□□□□ 0.24
LMNA-201ENST00000347559 TMEM260Q9NX78 707 aa16.57■□□□□ 0.24
LMNA-201ENST00000347559 ARPP21Q9UBL0 812 aaPredicted RBP16.57■□□□□ 0.24
LMNA-201ENST00000347559 CTNNAL1Q9UBT7 734 aa16.57■□□□□ 0.24
LMNA-201ENST00000347559 SH3BP1Q9Y3L3 701 aa16.57■□□□□ 0.24
LMNA-201ENST00000347559 STX2P32856 288 aa16.57■□□□□ 0.24
LMNA-201ENST00000347559 KLC1Q07866 573 aa16.57■□□□□ 0.24
LMNA-201ENST00000347559 ZNF449Q6P9G9 518 aa16.57■□□□□ 0.24
LMNA-201ENST00000347559 B4GALNT2Q8NHY0 566 aa16.57■□□□□ 0.24
LMNA-201ENST00000347559 RBM46Q8TBY0 533 aaKnown RBP16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms