RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 PTPROQ16827 1216 aa20.66■□□□□ 0.9
HDAC4-201ENST00000345617 ARMCX2Q7L311 632 aa20.66■□□□□ 0.9
HDAC4-201ENST00000345617 RASSF3Q86WH2 238 aa20.66■□□□□ 0.9
HDAC4-201ENST00000345617 ZNF579Q8NAF0 562 aaKnown RBP20.66■□□□□ 0.9
HDAC4-201ENST00000345617 C3orf20Q8ND61 904 aa20.66■□□□□ 0.9
HDAC4-201ENST00000345617 NDST4Q9H3R1 872 aa20.66■□□□□ 0.9
HDAC4-201ENST00000345617 QRICH2Q9H0J4 1663 aa20.66■□□□□ 0.9
HDAC4-201ENST00000345617 ZC3H12BQ5HYM0 836 aaKnown RBP20.66■□□□□ 0.9
HDAC4-201ENST00000345617 WDR70Q9NW82 654 aa20.66■□□□□ 0.9
HDAC4-201ENST00000345617 MEFVO15553 781 aaPredicted RBP20.66■□□□□ 0.9
HDAC4-201ENST00000345617 FSD1LQ9BXM9 530 aa20.66■□□□□ 0.9
HDAC4-201ENST00000345617 SRPRBQ9Y5M8 271 aaKnown RBP20.66■□□□□ 0.9
HDAC4-201ENST00000345617 UBE3CQ15386 1083 aa20.65■□□□□ 0.9
HDAC4-201ENST00000345617 TUBGCP3Q96CW5 907 aa20.65■□□□□ 0.9
HDAC4-201ENST00000345617 EPS8L2Q9H6S3 715 aa20.65■□□□□ 0.9
HDAC4-201ENST00000345617 SNX19Q92543 992 aa20.65■□□□□ 0.9
HDAC4-201ENST00000345617 ALKBH8Q96BT7 664 aaKnown RBP20.65■□□□□ 0.9
HDAC4-201ENST00000345617 ARL2BPQ9Y2Y0 163 aa20.65■□□□□ 0.9
HDAC4-201ENST00000345617 A0A0D9SFI3 127 aa20.65■□□□□ 0.9
HDAC4-201ENST00000345617 RCOR1Q9UKL0 485 aa20.65■□□□□ 0.9
HDAC4-201ENST00000345617 SLC7A5Q01650 507 aa20.65■□□□□ 0.9
HDAC4-201ENST00000345617 DIAPH2O60879 1101 aa20.65■□□□□ 0.9
HDAC4-201ENST00000345617 ABCE1P61221 599 aaKnown RBP20.65■□□□□ 0.9
HDAC4-201ENST00000345617 ADCK1Q86TW2 530 aa20.65■□□□□ 0.9
HDAC4-201ENST00000345617 TGFBRAP1Q8WUH2 860 aa20.65■□□□□ 0.9
HDAC4-201ENST00000345617 NEURL1BA8MQ27 555 aa20.65■□□□□ 0.9
HDAC4-201ENST00000345617 MXI1P50539 228 aa20.65■□□□□ 0.9
HDAC4-201ENST00000345617 OSBPL5Q9H0X9 879 aaPredicted RBP20.65■□□□□ 0.9
HDAC4-201ENST00000345617 MRPS25P82663 173 aaKnown RBP20.65■□□□□ 0.9
HDAC4-201ENST00000345617 DCAF15Q66K64 600 aa20.65■□□□□ 0.9
HDAC4-201ENST00000345617 SLFN12LQ6IEE8 588 aa20.65■□□□□ 0.9
HDAC4-201ENST00000345617 AMNQ9BXJ7 453 aa20.65■□□□□ 0.9
HDAC4-201ENST00000345617 ADA2Q9NZK5 511 aa20.65■□□□□ 0.9
HDAC4-201ENST00000345617 AP4S1Q9Y587 144 aa20.65■□□□□ 0.9
HDAC4-201ENST00000345617 PABPC4Q13310 644 aaKnown RBP eCLIP20.64■□□□□ 0.9
HDAC4-201ENST00000345617 SLC52A2Q9HAB3 445 aa20.64■□□□□ 0.9
HDAC4-201ENST00000345617 MLH3Q9UHC1 1453 aa20.64■□□□□ 0.9
HDAC4-201ENST00000345617 RPAP1Q9BWH6 1393 aaPredicted RBP20.64■□□□□ 0.9
HDAC4-201ENST00000345617 DEPDC1Q5TB30 811 aa20.64■□□□□ 0.9
HDAC4-201ENST00000345617 PLEKHM3Q6ZWE6 761 aa20.64■□□□□ 0.9
HDAC4-201ENST00000345617 SYBUQ9NX95 663 aa20.64■□□□□ 0.9
HDAC4-201ENST00000345617 PCDHA1Q9Y5I3 950 aa20.64■□□□□ 0.9
HDAC4-201ENST00000345617 RASSF9O75901 435 aa20.64■□□□□ 0.89
HDAC4-201ENST00000345617 TTC39CQ8N584 583 aa20.64■□□□□ 0.89
HDAC4-201ENST00000345617 LSG1Q9H089 658 aaKnown RBP20.64■□□□□ 0.89
HDAC4-201ENST00000345617 CDR2LQ86X02 465 aaPredicted RBP20.64■□□□□ 0.89
HDAC4-201ENST00000345617 COG1Q8WTW3 980 aa20.64■□□□□ 0.89
HDAC4-201ENST00000345617 CMTM5Q96DZ9 223 aa20.64■□□□□ 0.89
HDAC4-201ENST00000345617 RESP18Q5W5W9 173 aa20.64■□□□□ 0.89
HDAC4-201ENST00000345617 FBXO11Q86XK2 927 aa20.64■□□□□ 0.89
HDAC4-201ENST00000345617 CIAO1O76071 339 aa20.64■□□□□ 0.89
HDAC4-201ENST00000345617 FTCDO95954 541 aa20.64■□□□□ 0.89
HDAC4-201ENST00000345617 ALDH1B1P30837 517 aa20.64■□□□□ 0.89
HDAC4-201ENST00000345617 RUNX1T1Q06455 604 aa20.64■□□□□ 0.89
HDAC4-201ENST00000345617 SLC44A4Q53GD3 710 aa20.64■□□□□ 0.89
HDAC4-201ENST00000345617 NSMFQ6X4W1 530 aa20.64■□□□□ 0.89
HDAC4-201ENST00000345617 BTBD18B2RXH4 712 aa20.64■□□□□ 0.89
HDAC4-201ENST00000345617 CNBD2Q96M20 576 aa20.64■□□□□ 0.89
HDAC4-201ENST00000345617 USP19O94966 1318 aa20.63■□□□□ 0.89
HDAC4-201ENST00000345617 GSPT1P15170 499 aaKnown RBP20.63■□□□□ 0.89
HDAC4-201ENST00000345617 C16orf89Q6UX73 402 aa20.63■□□□□ 0.89
HDAC4-201ENST00000345617 SRLQ86TD4 932 aa20.63■□□□□ 0.89
HDAC4-201ENST00000345617 PPP1R2P1Q96PQ5 205 aa20.63■□□□□ 0.89
HDAC4-201ENST00000345617 MLXIPQ9HAP2 919 aa20.63■□□□□ 0.89
HDAC4-201ENST00000345617 PMS1P54277 932 aaKnown RBP20.63■□□□□ 0.89
HDAC4-201ENST00000345617 TSTA3Q13630 321 aaPredicted RBP20.63■□□□□ 0.89
HDAC4-201ENST00000345617 TTC17Q96AE7 1141 aa20.63■□□□□ 0.89
HDAC4-201ENST00000345617 PHF21AQ96BD5 680 aa20.63■□□□□ 0.89
HDAC4-201ENST00000345617 WNT8AQ9H1J5 351 aa20.63■□□□□ 0.89
HDAC4-201ENST00000345617 ANXA13P27216 316 aa20.63■□□□□ 0.89
HDAC4-201ENST00000345617 PMS2P54278 862 aa20.63■□□□□ 0.89
HDAC4-201ENST00000345617 TRAF7Q6Q0C0 670 aa20.63■□□□□ 0.89
HDAC4-201ENST00000345617 TADA1Q96BN2 335 aa20.63■□□□□ 0.89
HDAC4-201ENST00000345617 FAM161BQ96MY7 647 aa20.63■□□□□ 0.89
HDAC4-201ENST00000345617 CCDC134Q9H6E4 229 aa20.63■□□□□ 0.89
HDAC4-201ENST00000345617 SIX6OS1Q8N1H7 587 aa20.63■□□□□ 0.89
HDAC4-201ENST00000345617 PSMA2P25787 234 aa20.63■□□□□ 0.89
HDAC4-201ENST00000345617 CYTH1Q15438 398 aa20.63■□□□□ 0.89
HDAC4-201ENST00000345617 PRUNE1Q86TP1 453 aa20.63■□□□□ 0.89
HDAC4-201ENST00000345617 SAYSD1Q9NPB0 183 aa20.63■□□□□ 0.89
HDAC4-201ENST00000345617 KRT7P08729 469 aa20.63■□□□□ 0.89
HDAC4-201ENST00000345617 ADRM1Q16186 407 aa20.63■□□□□ 0.89
HDAC4-201ENST00000345617 UBE2TQ9NPD8 197 aaPredicted RBP20.63■□□□□ 0.89
HDAC4-201ENST00000345617 GJC2Q5T442 439 aaPredicted RBP20.63■□□□□ 0.89
HDAC4-201ENST00000345617 ERBB4Q15303 1308 aa20.63■□□□□ 0.89
HDAC4-201ENST00000345617 GFPT2O94808 682 aa20.62■□□□□ 0.89
HDAC4-201ENST00000345617 KRT31Q15323 416 aa20.62■□□□□ 0.89
HDAC4-201ENST00000345617 CXorf56Q9H5V9 222 aa20.62■□□□□ 0.89
HDAC4-201ENST00000345617 WDR91A4D1P6 747 aa20.62■□□□□ 0.89
HDAC4-201ENST00000345617 FAM187AA6NFU0 413 aa20.62■□□□□ 0.89
HDAC4-201ENST00000345617 TTLL1O95922 423 aa20.62■□□□□ 0.89
HDAC4-201ENST00000345617 LAMC2Q13753 1193 aa20.62■□□□□ 0.89
HDAC4-201ENST00000345617 LINC00301Q8NCQ3 95 aa20.62■□□□□ 0.89
HDAC4-201ENST00000345617 MAP4K1Q92918 833 aa20.62■□□□□ 0.89
HDAC4-201ENST00000345617 CCNE1P24864 410 aa20.62■□□□□ 0.89
HDAC4-201ENST00000345617 ARFIP2P53365 341 aa20.62■□□□□ 0.89
HDAC4-201ENST00000345617 CUL4AQ13619 759 aa20.62■□□□□ 0.89
HDAC4-201ENST00000345617 NR1H4Q96RI1 486 aaPredicted RBP20.62■□□□□ 0.89
HDAC4-201ENST00000345617 SEL1LQ9UBV2 794 aa20.62■□□□□ 0.89
HDAC4-201ENST00000345617 DCDC2Q9UHG0 476 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms