RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 CHAMP1Q96JM3 812 aa17.75■□□□□ 0.43
SMARCA4-201ENST00000344626 UBE2TQ9NPD8 197 aaPredicted RBP17.75■□□□□ 0.43
SMARCA4-201ENST00000344626 DDX4Q9NQI0 724 aaKnown RBP17.75■□□□□ 0.43
SMARCA4-201ENST00000344626 RGL1Q9NZL6 768 aa17.75■□□□□ 0.43
SMARCA4-201ENST00000344626 XKR3Q5GH77 459 aa17.75■□□□□ 0.43
SMARCA4-201ENST00000344626 SUCLA2Q9P2R7 463 aaPredicted RBP17.75■□□□□ 0.43
SMARCA4-201ENST00000344626 TLDC2A0PJX2 215 aa17.74■□□□□ 0.43
SMARCA4-201ENST00000344626 THPOP40225 353 aa17.74■□□□□ 0.43
SMARCA4-201ENST00000344626 LGSNQ5TDP6 509 aa17.74■□□□□ 0.43
SMARCA4-201ENST00000344626 HAUS4Q9H6D7 363 aa17.74■□□□□ 0.43
SMARCA4-201ENST00000344626 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.74■□□□□ 0.43
SMARCA4-201ENST00000344626 PCDHAC2Q9Y5I4 1007 aa17.74■□□□□ 0.43
SMARCA4-201ENST00000344626 ICAM1P05362 532 aa17.74■□□□□ 0.43
SMARCA4-201ENST00000344626 HEXIM2Q96MH2 286 aaKnown RBP17.74■□□□□ 0.43
SMARCA4-201ENST00000344626 ERAP1Q9NZ08 941 aa17.74■□□□□ 0.43
SMARCA4-201ENST00000344626 TBC1D8O95759 1140 aa17.74■□□□□ 0.43
SMARCA4-201ENST00000344626 FKBP1CQ5VVH2 108 aa17.74■□□□□ 0.43
SMARCA4-201ENST00000344626 ADCY3O60266 1144 aa17.74■□□□□ 0.43
SMARCA4-201ENST00000344626 CASP7P55210 303 aa17.74■□□□□ 0.43
SMARCA4-201ENST00000344626 UAP1Q16222 522 aaPredicted RBP17.74■□□□□ 0.43
SMARCA4-201ENST00000344626 TTC30AQ86WT1 665 aa17.74■□□□□ 0.43
SMARCA4-201ENST00000344626 TBC1D31Q96DN5 1066 aa17.74■□□□□ 0.43
SMARCA4-201ENST00000344626 MRPL47Q9HD33 250 aaKnown RBP17.74■□□□□ 0.43
SMARCA4-201ENST00000344626 CLMNQ96JQ2 1002 aa17.73■□□□□ 0.43
SMARCA4-201ENST00000344626 PPP1R12CQ9BZL4 782 aa17.73■□□□□ 0.43
SMARCA4-201ENST00000344626 MAGEB2O15479 319 aa17.73■□□□□ 0.43
SMARCA4-201ENST00000344626 ONECUT3O60422 494 aaPredicted RBP17.73■□□□□ 0.43
SMARCA4-201ENST00000344626 GPC3P51654 580 aa17.73■□□□□ 0.43
SMARCA4-201ENST00000344626 CRY2Q49AN0 593 aa17.73■□□□□ 0.43
SMARCA4-201ENST00000344626 RNF139Q8WU17 664 aa17.73■□□□□ 0.43
SMARCA4-201ENST00000344626 MAP3K20Q9NYL2 800 aaKnown RBP17.73■□□□□ 0.43
SMARCA4-201ENST00000344626 DPCR1Q3MIW9 517 aa17.73■□□□□ 0.43
SMARCA4-201ENST00000344626 CERS5Q8N5B7 392 aa17.73■□□□□ 0.43
SMARCA4-201ENST00000344626 SAMD3Q8N6K7 520 aa17.73■□□□□ 0.43
SMARCA4-201ENST00000344626 RAB17Q9H0T7 212 aa17.73■□□□□ 0.43
SMARCA4-201ENST00000344626 BCL9LQ86UU0 1499 aa17.73■□□□□ 0.43
SMARCA4-201ENST00000344626 HUS1O60921 280 aa17.73■□□□□ 0.43
SMARCA4-201ENST00000344626 CPB1P15086 417 aa17.73■□□□□ 0.43
SMARCA4-201ENST00000344626 CASC4Q6P4E1 433 aa17.73■□□□□ 0.43
SMARCA4-201ENST00000344626 ADGRA1Q86SQ6 560 aa17.73■□□□□ 0.43
SMARCA4-201ENST00000344626 SMAP1Q8IYB5 467 aaPredicted RBP17.73■□□□□ 0.43
SMARCA4-201ENST00000344626 RPGRIP1Q96KN7 1286 aa17.73■□□□□ 0.43
SMARCA4-201ENST00000344626 SELENOSQ9BQE4 189 aa17.73■□□□□ 0.43
SMARCA4-201ENST00000344626 PTPRAP18433 802 aa17.72■□□□□ 0.43
SMARCA4-201ENST00000344626 TSPY1Q01534 308 aa17.72■□□□□ 0.43
SMARCA4-201ENST00000344626 CUL4BQ13620 913 aa17.72■□□□□ 0.43
SMARCA4-201ENST00000344626 NME8Q8N427 588 aa17.72■□□□□ 0.43
SMARCA4-201ENST00000344626 KIAA1683Q9H0B3 1180 aa17.72■□□□□ 0.43
SMARCA4-201ENST00000344626 MYO5BQ9ULV0 1848 aa17.72■□□□□ 0.43
SMARCA4-201ENST00000344626 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.72■□□□□ 0.43
SMARCA4-201ENST00000344626 TTC39CQ8N584 583 aa17.72■□□□□ 0.43
SMARCA4-201ENST00000344626 TMEM143Q96AN5 459 aa17.72■□□□□ 0.43
SMARCA4-201ENST00000344626 IDI2Q9BXS1 227 aa17.72■□□□□ 0.43
SMARCA4-201ENST00000344626 PPANQ9NQ55 473 aaKnown RBP17.72■□□□□ 0.43
SMARCA4-201ENST00000344626 SMIM23A6NLE4 172 aa17.72■□□□□ 0.43
SMARCA4-201ENST00000344626 STRNO43815 780 aa17.72■□□□□ 0.43
SMARCA4-201ENST00000344626 EYA4O95677 639 aa17.72■□□□□ 0.43
SMARCA4-201ENST00000344626 FKBP1BP68106 108 aa17.72■□□□□ 0.43
SMARCA4-201ENST00000344626 ATP2C1P98194 919 aaPredicted RBP17.72■□□□□ 0.43
SMARCA4-201ENST00000344626 RAB3IL1Q8TBN0 382 aa17.72■□□□□ 0.43
SMARCA4-201ENST00000344626 ITKQ08881 620 aa17.72■□□□□ 0.43
SMARCA4-201ENST00000344626 PPIL2Q13356 520 aa17.72■□□□□ 0.43
SMARCA4-201ENST00000344626 SLC38A10Q9HBR0 1119 aa17.72■□□□□ 0.43
SMARCA4-201ENST00000344626 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.72■□□□□ 0.43
SMARCA4-201ENST00000344626 YWHABP31946 246 aaKnown RBP17.71■□□□□ 0.43
SMARCA4-201ENST00000344626 CIITAP33076 1130 aa17.71■□□□□ 0.43
SMARCA4-201ENST00000344626 DEFB128Q7Z7B8 93 aa17.71■□□□□ 0.43
SMARCA4-201ENST00000344626 PHF20Q9BVI0 1012 aa17.71■□□□□ 0.43
SMARCA4-201ENST00000344626 KIF9Q9HAQ2 790 aa17.71■□□□□ 0.43
SMARCA4-201ENST00000344626 PFDN6O15212 129 aa17.71■□□□□ 0.43
SMARCA4-201ENST00000344626 XPAP23025 273 aaPredicted RBP17.71■□□□□ 0.43
SMARCA4-201ENST00000344626 C6orf163Q5TEZ5 329 aa17.71■□□□□ 0.43
SMARCA4-201ENST00000344626 SRGAP1Q7Z6B7 1085 aa17.71■□□□□ 0.43
SMARCA4-201ENST00000344626 KLHL7Q8IXQ5 586 aa17.71■□□□□ 0.43
SMARCA4-201ENST00000344626 SOCS4Q8WXH5 440 aa17.71■□□□□ 0.43
SMARCA4-201ENST00000344626 CEP63Q96MT8 703 aa17.71■□□□□ 0.43
SMARCA4-201ENST00000344626 HYOU1Q9Y4L1 999 aa17.71■□□□□ 0.43
SMARCA4-201ENST00000344626 EPN1Q9Y6I3 576 aaPredicted RBP17.71■□□□□ 0.43
SMARCA4-201ENST00000344626 BNIP3LO60238 219 aa17.71■□□□□ 0.43
SMARCA4-201ENST00000344626 DGAT1O75907 488 aa17.71■□□□□ 0.43
SMARCA4-201ENST00000344626 ADORA2AP29274 412 aa17.71■□□□□ 0.43
SMARCA4-201ENST00000344626 GUCY1A2P33402 732 aa17.71■□□□□ 0.43
SMARCA4-201ENST00000344626 COASYQ13057 564 aa17.71■□□□□ 0.43
SMARCA4-201ENST00000344626 MXD4Q14582 209 aaPredicted RBP17.71■□□□□ 0.43
SMARCA4-201ENST00000344626 TOMM70O94826 608 aa17.71■□□□□ 0.43
SMARCA4-201ENST00000344626 CYP2C19P33261 490 aa17.71■□□□□ 0.43
SMARCA4-201ENST00000344626 EVCP57679 992 aa17.71■□□□□ 0.43
SMARCA4-201ENST00000344626 RYBPQ8N488 228 aaPredicted RBP17.71■□□□□ 0.43
SMARCA4-201ENST00000344626 PPM1EQ8WY54 764 aa17.71■□□□□ 0.43
SMARCA4-201ENST00000344626 CCT6BQ92526 530 aa17.71■□□□□ 0.43
SMARCA4-201ENST00000344626 FAM107BQ9H098 131 aa17.71■□□□□ 0.43
SMARCA4-201ENST00000344626 ROBO1Q9Y6N7 1651 aa17.71■□□□□ 0.42
SMARCA4-201ENST00000344626 AP3M2P53677 418 aa17.71■□□□□ 0.42
SMARCA4-201ENST00000344626 GLB1LQ6UWU2 654 aa17.71■□□□□ 0.42
SMARCA4-201ENST00000344626 NDST4Q9H3R1 872 aa17.71■□□□□ 0.42
SMARCA4-201ENST00000344626 KCNK9Q9NPC2 374 aa17.71■□□□□ 0.42
SMARCA4-201ENST00000344626 NKIRAS1Q9NYS0 192 aa17.71■□□□□ 0.42
SMARCA4-201ENST00000344626 SAR1BQ9Y6B6 198 aa17.71■□□□□ 0.42
SMARCA4-201ENST00000344626 ADGRB2O60241 1585 aa17.7■□□□□ 0.42
SMARCA4-201ENST00000344626 EIF3CLB5ME19 914 aaKnown RBP17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms