RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 ZWILCHQ9H900 591 aa6.57□□□□□ -1.36
VCAN-203ENST00000343200 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.57□□□□□ -1.36
VCAN-203ENST00000343200 TRPC6Q9Y210 931 aa6.57□□□□□ -1.36
VCAN-203ENST00000343200 IGHDP01880 384 aa6.57□□□□□ -1.36
VCAN-203ENST00000343200 LRPAP1P30533 357 aa6.57□□□□□ -1.36
VCAN-203ENST00000343200 TALDO1P37837 337 aa6.57□□□□□ -1.36
VCAN-203ENST00000343200 SESN2P58004 480 aaPredicted RBP6.57□□□□□ -1.36
VCAN-203ENST00000343200 ARHGAP17Q68EM7 881 aa6.57□□□□□ -1.36
VCAN-203ENST00000343200 GPT2Q8TD30 523 aa6.57□□□□□ -1.36
VCAN-203ENST00000343200 BHMTQ93088 406 aa6.57□□□□□ -1.36
VCAN-203ENST00000343200 C1orf50Q9BV19 199 aa6.57□□□□□ -1.36
VCAN-203ENST00000343200 GOLPH3LQ9H4A5 285 aa6.57□□□□□ -1.36
VCAN-203ENST00000343200 ZNF556Q9HAH1 456 aa6.57□□□□□ -1.36
VCAN-203ENST00000343200 EURLQ9NYK6 297 aa6.57□□□□□ -1.36
VCAN-203ENST00000343200 MAP3K20Q9NYL2 800 aaKnown RBP6.57□□□□□ -1.36
VCAN-203ENST00000343200 STK39Q9UEW8 545 aa6.57□□□□□ -1.36
VCAN-203ENST00000343200 MCM8Q9UJA3 840 aa6.57□□□□□ -1.36
VCAN-203ENST00000343200 ANGEL1Q9UNK9 670 aaKnown RBP6.57□□□□□ -1.36
VCAN-203ENST00000343200 PNMA8CA0A1B0GUJ8 204 aa6.57□□□□□ -1.36
VCAN-203ENST00000343200 A6NJR5 290 aa6.57□□□□□ -1.36
VCAN-203ENST00000343200 KRT38O76015 456 aa6.57□□□□□ -1.36
VCAN-203ENST00000343200 HAUS5O94927 633 aa6.57□□□□□ -1.36
VCAN-203ENST00000343200 CCNCP24863 283 aa6.57□□□□□ -1.36
VCAN-203ENST00000343200 ARMC4Q5T2S8 1044 aa6.57□□□□□ -1.36
VCAN-203ENST00000343200 TRIM67Q6ZTA4 783 aa6.57□□□□□ -1.36
VCAN-203ENST00000343200 TESK2Q96S53 571 aa6.57□□□□□ -1.36
VCAN-203ENST00000343200 ABCB6Q9NP58 842 aa6.57□□□□□ -1.36
VCAN-203ENST00000343200 TCP11X1B4DZS4 312 aa6.57□□□□□ -1.36
VCAN-203ENST00000343200 MFN2O95140 757 aa6.57□□□□□ -1.36
VCAN-203ENST00000343200 MSL3P1P0C860 447 aa6.57□□□□□ -1.36
VCAN-203ENST00000343200 POLR2EP19388 210 aaKnown RBP6.57□□□□□ -1.36
VCAN-203ENST00000343200 ADALQ6DHV7 355 aa6.57□□□□□ -1.36
VCAN-203ENST00000343200 THOC7Q6I9Y2 204 aaKnown RBP6.57□□□□□ -1.36
VCAN-203ENST00000343200 SLC35F6Q8N357 371 aa6.57□□□□□ -1.36
VCAN-203ENST00000343200 PPHLN1Q8NEY8 458 aaKnown RBP6.57□□□□□ -1.36
VCAN-203ENST00000343200 U2AF1L4Q8WU68 220 aaKnown RBP6.57□□□□□ -1.36
VCAN-203ENST00000343200 TADA1Q96BN2 335 aa6.57□□□□□ -1.36
VCAN-203ENST00000343200 TRAPPC9Q96Q05 1148 aa6.57□□□□□ -1.36
VCAN-203ENST00000343200 LZTS2Q9BRK4 669 aa6.57□□□□□ -1.36
VCAN-203ENST00000343200 KDM4CQ9H3R0 1056 aa6.57□□□□□ -1.36
VCAN-203ENST00000343200 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.57□□□□□ -1.36
VCAN-203ENST00000343200 VAT1LQ9HCJ6 419 aa6.57□□□□□ -1.36
VCAN-203ENST00000343200 HMG20AQ9NP66 347 aa6.57□□□□□ -1.36
VCAN-203ENST00000343200 IARS2Q9NSE4 1012 aaKnown RBP6.57□□□□□ -1.36
VCAN-203ENST00000343200 MED13LQ71F56 2210 aa6.57□□□□□ -1.36
VCAN-203ENST00000343200 ARHGAP31Q2M1Z3 1444 aa6.57□□□□□ -1.36
VCAN-203ENST00000343200 FOXP2O15409 715 aa6.57□□□□□ -1.36
VCAN-203ENST00000343200 NLRP6P59044 892 aa6.57□□□□□ -1.36
VCAN-203ENST00000343200 CYP4A11Q02928 519 aa6.57□□□□□ -1.36
VCAN-203ENST00000343200 ATP13A5Q4VNC0 1218 aa6.57□□□□□ -1.36
VCAN-203ENST00000343200 CYP4A22Q5TCH4 519 aa6.57□□□□□ -1.36
VCAN-203ENST00000343200 TRIQKQ629K1 86 aa6.57□□□□□ -1.36
VCAN-203ENST00000343200 HEATR4Q86WZ0 1026 aa6.57□□□□□ -1.36
VCAN-203ENST00000343200 GLMNQ92990 594 aa6.57□□□□□ -1.36
VCAN-203ENST00000343200 KLHL4Q9C0H6 718 aa6.57□□□□□ -1.36
VCAN-203ENST00000343200 NACA2Q9H009 215 aa6.57□□□□□ -1.36
VCAN-203ENST00000343200 C1orf112Q9NSG2 853 aa6.57□□□□□ -1.36
VCAN-203ENST00000343200 RWDD2AQ9UIY3 292 aa6.57□□□□□ -1.36
VCAN-203ENST00000343200 DIS3Q9Y2L1 958 aaKnown RBP6.57□□□□□ -1.36
VCAN-203ENST00000343200 CAMSAP1Q5T5Y3 1602 aa6.57□□□□□ -1.36
VCAN-203ENST00000343200 SMCO2A6NFE2 343 aa6.56□□□□□ -1.36
VCAN-203ENST00000343200 PCP4L1A6NKN8 68 aa6.56□□□□□ -1.36
VCAN-203ENST00000343200 CYTH3O43739 400 aa6.56□□□□□ -1.36
VCAN-203ENST00000343200 GADD45BO75293 160 aaPredicted RBP6.56□□□□□ -1.36
VCAN-203ENST00000343200 VIL1P09327 827 aaKnown RBP6.56□□□□□ -1.36
VCAN-203ENST00000343200 ATP6V1B1P15313 513 aa6.56□□□□□ -1.36
VCAN-203ENST00000343200 PAMP19021 973 aa6.56□□□□□ -1.36
VCAN-203ENST00000343200 SERPINH1P50454 418 aaKnown RBP6.56□□□□□ -1.36
VCAN-203ENST00000343200 AKNAD1Q5T1N1 836 aa6.56□□□□□ -1.36
VCAN-203ENST00000343200 CENPPQ6IPU0 288 aa6.56□□□□□ -1.36
VCAN-203ENST00000343200 SARM1Q6SZW1 724 aa6.56□□□□□ -1.36
VCAN-203ENST00000343200 CCT8L2Q96SF2 557 aa6.56□□□□□ -1.36
VCAN-203ENST00000343200 CCSER2Q9H7U1 834 aa6.56□□□□□ -1.36
VCAN-203ENST00000343200 AURKCQ9UQB9 309 aa6.56□□□□□ -1.36
VCAN-203ENST00000343200 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.56□□□□□ -1.36
VCAN-203ENST00000343200 EIF4E1BA6NMX2 242 aaKnown RBP6.56□□□□□ -1.36
VCAN-203ENST00000343200 BRD1O95696 1058 aa6.56□□□□□ -1.36
VCAN-203ENST00000343200 KRT20P35900 424 aa6.56□□□□□ -1.36
VCAN-203ENST00000343200 EPS8Q12929 822 aa6.56□□□□□ -1.36
VCAN-203ENST00000343200 BBS9Q3SYG4 887 aa6.56□□□□□ -1.36
VCAN-203ENST00000343200 ADAT2Q7Z6V5 191 aaKnown RBP6.56□□□□□ -1.36
VCAN-203ENST00000343200 SGSM3Q96HU1 749 aa6.56□□□□□ -1.36
VCAN-203ENST00000343200 AIPL1Q9NZN9 384 aa6.56□□□□□ -1.36
VCAN-203ENST00000343200 LCMT1Q9UIC8 334 aa6.56□□□□□ -1.36
VCAN-203ENST00000343200 UGGT2Q9NYU1 1516 aa6.56□□□□□ -1.36
VCAN-203ENST00000343200 SPHKAPQ2M3C7 1700 aa6.56□□□□□ -1.36
VCAN-203ENST00000343200 ZSCAN9O15535 394 aaPredicted RBP6.56□□□□□ -1.36
VCAN-203ENST00000343200 PFKFB2O60825 505 aa6.56□□□□□ -1.36
VCAN-203ENST00000343200 AFPP02771 609 aaKnown RBP6.56□□□□□ -1.36
VCAN-203ENST00000343200 FOSL1P15407 271 aa6.56□□□□□ -1.36
VCAN-203ENST00000343200 TCF3P15923 654 aa6.56□□□□□ -1.36
VCAN-203ENST00000343200 TATP17735 454 aaPredicted RBP6.56□□□□□ -1.36
VCAN-203ENST00000343200 HMOX2P30519 316 aa6.56□□□□□ -1.36
VCAN-203ENST00000343200 TNNI2P48788 182 aa6.56□□□□□ -1.36
VCAN-203ENST00000343200 HSPA2P54652 639 aa6.56□□□□□ -1.36
VCAN-203ENST00000343200 ARL13BQ3SXY8 428 aa6.56□□□□□ -1.36
VCAN-203ENST00000343200 TAF8Q7Z7C8 310 aa6.56□□□□□ -1.36
VCAN-203ENST00000343200 STAMQ92783 540 aa6.56□□□□□ -1.36
VCAN-203ENST00000343200 ERAP1Q9NZ08 941 aa6.56□□□□□ -1.36
VCAN-203ENST00000343200 UVRAGQ9P2Y5 699 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms