RNA–Protein interactions for RNA: ENST00000341697.7

SEMA6C-201, Transcript of semaphorin 6C, humanhuman

TSL 1 (best)

Gene SEMA6C, Length 5,262 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-201ENST00000341697 ZFYVE28Q9HCC9 887 aa21.16■□□□□ 0.98
SEMA6C-201ENST00000341697 TYW5A2RUC4 315 aaKnown RBP21.15■□□□□ 0.98
SEMA6C-201ENST00000341697 KCNH2Q12809 1159 aa21.15■□□□□ 0.98
SEMA6C-201ENST00000341697 CCDC6Q16204 474 aa21.15■□□□□ 0.98
SEMA6C-201ENST00000341697 FYB2Q5VWT5 728 aa21.15■□□□□ 0.98
SEMA6C-201ENST00000341697 CYFIP1Q7L576 1253 aa21.15■□□□□ 0.98
SEMA6C-201ENST00000341697 SRGAP1Q7Z6B7 1085 aa21.15■□□□□ 0.98
SEMA6C-201ENST00000341697 SLC12A6Q9UHW9 1150 aa21.15■□□□□ 0.98
SEMA6C-201ENST00000341697 PFASO15067 1338 aa21.15■□□□□ 0.98
SEMA6C-201ENST00000341697 EIF3CLB5ME19 914 aaKnown RBP21.15■□□□□ 0.98
SEMA6C-201ENST00000341697 GIPC1O14908 333 aa21.15■□□□□ 0.98
SEMA6C-201ENST00000341697 MAP7D1Q3KQU3 841 aa21.15■□□□□ 0.98
SEMA6C-201ENST00000341697 ALKBH5Q6P6C2 394 aaKnown RBP21.15■□□□□ 0.98
SEMA6C-201ENST00000341697 CHST13Q8NET6 341 aa21.15■□□□□ 0.98
SEMA6C-201ENST00000341697 OR6J1Q8NGC5 347 aa21.15■□□□□ 0.98
SEMA6C-201ENST00000341697 EIF3CQ99613 913 aaKnown RBP21.15■□□□□ 0.98
SEMA6C-201ENST00000341697 ADARB2Q9NS39 739 aaKnown RBP21.15■□□□□ 0.98
SEMA6C-201ENST00000341697 CEP72Q9P209 647 aa21.15■□□□□ 0.98
SEMA6C-201ENST00000341697 PCDHA13Q9Y5I0 950 aa21.15■□□□□ 0.98
SEMA6C-201ENST00000341697 ANXA13P27216 316 aa21.15■□□□□ 0.98
SEMA6C-201ENST00000341697 GPC3P51654 580 aa21.15■□□□□ 0.98
SEMA6C-201ENST00000341697 GSDMBQ8TAX9 411 aa21.15■□□□□ 0.98
SEMA6C-201ENST00000341697 PPM1EQ8WY54 764 aa21.15■□□□□ 0.98
SEMA6C-201ENST00000341697 XKR3Q5GH77 459 aa21.15■□□□□ 0.98
SEMA6C-201ENST00000341697 MAGOHBQ96A72 148 aaKnown RBP21.15■□□□□ 0.98
SEMA6C-201ENST00000341697 TIPINQ9BVW5 301 aa21.15■□□□□ 0.98
SEMA6C-201ENST00000341697 GBP1P32455 592 aa21.14■□□□□ 0.98
SEMA6C-201ENST00000341697 CXCL9Q07325 125 aa21.14■□□□□ 0.98
SEMA6C-201ENST00000341697 CLEC17AQ6ZS10 378 aa21.14■□□□□ 0.98
SEMA6C-201ENST00000341697 HAUS6Q7Z4H7 955 aa21.14■□□□□ 0.98
SEMA6C-201ENST00000341697 RAET1EQ8TD07 263 aa21.14■□□□□ 0.98
SEMA6C-201ENST00000341697 GDAP1L1Q96MZ0 367 aa21.14■□□□□ 0.98
SEMA6C-201ENST00000341697 ADAMTS1Q9UHI8 967 aa21.14■□□□□ 0.98
SEMA6C-201ENST00000341697 CELF2O95319 508 aaKnown RBP21.14■□□□□ 0.98
SEMA6C-201ENST00000341697 CTNNA1P35221 906 aaKnown RBP21.14■□□□□ 0.98
SEMA6C-201ENST00000341697 TROAPQ12815 778 aa21.14■□□□□ 0.98
SEMA6C-201ENST00000341697 KCNB1Q14721 858 aa21.14■□□□□ 0.98
SEMA6C-201ENST00000341697 UBR1Q8IWV7 1749 aa21.14■□□□□ 0.97
SEMA6C-201ENST00000341697 VAMP7P51809 220 aa21.14■□□□□ 0.97
SEMA6C-201ENST00000341697 ERCC6LQ2NKX8 1250 aa21.14■□□□□ 0.97
SEMA6C-201ENST00000341697 BEST2Q8NFU1 509 aa21.14■□□□□ 0.97
SEMA6C-201ENST00000341697 ATP2A3Q93084 1043 aa21.14■□□□□ 0.97
SEMA6C-201ENST00000341697 ZNF699Q32M78 642 aa21.14■□□□□ 0.97
SEMA6C-201ENST00000341697 CCDC110Q8TBZ0 833 aa21.14■□□□□ 0.97
SEMA6C-201ENST00000341697 ATG4CQ96DT6 458 aa21.14■□□□□ 0.97
SEMA6C-201ENST00000341697 EFNA5P52803 228 aa21.13■□□□□ 0.97
SEMA6C-201ENST00000341697 ERICH1Q86X53 443 aa21.13■□□□□ 0.97
SEMA6C-201ENST00000341697 MAD2L2Q9UI95 211 aa21.13■□□□□ 0.97
SEMA6C-201ENST00000341697 INPP5FQ9Y2H2 1132 aa21.13■□□□□ 0.97
SEMA6C-201ENST00000341697 ESYT2A0FGR8 921 aa21.13■□□□□ 0.97
SEMA6C-201ENST00000341697 ARL4AP40617 200 aa21.13■□□□□ 0.97
SEMA6C-201ENST00000341697 CYP27A1Q02318 531 aa21.13■□□□□ 0.97
SEMA6C-201ENST00000341697 GPRC5AQ8NFJ5 357 aa21.13■□□□□ 0.97
SEMA6C-201ENST00000341697 SEPT1Q8WYJ6 367 aa21.13■□□□□ 0.97
SEMA6C-201ENST00000341697 SLC26A4O43511 780 aa21.13■□□□□ 0.97
SEMA6C-201ENST00000341697 BBS5Q8N3I7 341 aa21.13■□□□□ 0.97
SEMA6C-201ENST00000341697 KCNH4Q9UQ05 1017 aa21.13■□□□□ 0.97
SEMA6C-201ENST00000341697 SALL1Q9NSC2 1324 aa21.13■□□□□ 0.97
SEMA6C-201ENST00000341697 DGAT1O75907 488 aa21.13■□□□□ 0.97
SEMA6C-201ENST00000341697 KRT1P04264 644 aa21.13■□□□□ 0.97
SEMA6C-201ENST00000341697 ELF1P32519 619 aa21.13■□□□□ 0.97
SEMA6C-201ENST00000341697 FDPSP14324 419 aaKnown RBP21.12■□□□□ 0.97
SEMA6C-201ENST00000341697 ZNF668Q96K58 619 aaPredicted RBP21.12■□□□□ 0.97
SEMA6C-201ENST00000341697 AGBL1Q96MI9 1066 aa21.12■□□□□ 0.97
SEMA6C-201ENST00000341697 EHD4Q9H223 541 aa21.12■□□□□ 0.97
SEMA6C-201ENST00000341697 MOCS3O95396 460 aa21.12■□□□□ 0.97
SEMA6C-201ENST00000341697 AFAP1L2Q8N4X5 818 aa21.12■□□□□ 0.97
SEMA6C-201ENST00000341697 ZKSCAN4Q969J2 545 aaPredicted RBP21.12■□□□□ 0.97
SEMA6C-201ENST00000341697 TRIM9Q9C026 710 aa21.12■□□□□ 0.97
SEMA6C-201ENST00000341697 GPBP1L1Q9HC44 474 aaPredicted RBP21.12■□□□□ 0.97
SEMA6C-201ENST00000341697 HPS5Q9UPZ3 1129 aa21.12■□□□□ 0.97
SEMA6C-201ENST00000341697 FOXN1O15353 648 aa21.12■□□□□ 0.97
SEMA6C-201ENST00000341697 RGS16O15492 202 aaPredicted RBP21.12■□□□□ 0.97
SEMA6C-201ENST00000341697 XRRA1Q6P2D8 792 aa21.12■□□□□ 0.97
SEMA6C-201ENST00000341697 THEM5Q8N1Q8 247 aa21.12■□□□□ 0.97
SEMA6C-201ENST00000341697 SCINQ9Y6U3 715 aa21.12■□□□□ 0.97
SEMA6C-201ENST00000341697 PGRMC1O00264 195 aaKnown RBP21.11■□□□□ 0.97
SEMA6C-201ENST00000341697 MAFGO15525 162 aa21.11■□□□□ 0.97
SEMA6C-201ENST00000341697 SMARCAD1Q9H4L7 1026 aa21.11■□□□□ 0.97
SEMA6C-201ENST00000341697 JRKLQ9Y4A0 524 aa21.11■□□□□ 0.97
SEMA6C-201ENST00000341697 PRPSAP2O60256 369 aa21.11■□□□□ 0.97
SEMA6C-201ENST00000341697 HUS1O60921 280 aa21.11■□□□□ 0.97
SEMA6C-201ENST00000341697 PRPSAP1Q14558 356 aa21.11■□□□□ 0.97
SEMA6C-201ENST00000341697 RNF139Q8WU17 664 aa21.11■□□□□ 0.97
SEMA6C-201ENST00000341697 ZBED2Q9BTP6 218 aa21.11■□□□□ 0.97
SEMA6C-201ENST00000341697 FTCDO95954 541 aa21.11■□□□□ 0.97
SEMA6C-201ENST00000341697 PHLDB2Q86SQ0 1253 aa21.11■□□□□ 0.97
SEMA6C-201ENST00000341697 RHOT2Q8IXI1 618 aa21.11■□□□□ 0.97
SEMA6C-201ENST00000341697 MXRA8Q9BRK3 442 aa21.11■□□□□ 0.97
SEMA6C-201ENST00000341697 RNF14Q9UBS8 474 aa21.11■□□□□ 0.97
SEMA6C-201ENST00000341697 GH1P01241 217 aa21.11■□□□□ 0.97
SEMA6C-201ENST00000341697 ZNF394Q53GI3 561 aa21.11■□□□□ 0.97
SEMA6C-201ENST00000341697 GPD1LQ8N335 351 aa21.11■□□□□ 0.97
SEMA6C-201ENST00000341697 TAB3Q8N5C8 712 aaPredicted RBP21.11■□□□□ 0.97
SEMA6C-201ENST00000341697 C3P01024 1663 aa21.11■□□□□ 0.97
SEMA6C-201ENST00000341697 SGK1O00141 431 aa21.1■□□□□ 0.97
SEMA6C-201ENST00000341697 KRT39Q6A163 491 aa21.1■□□□□ 0.97
SEMA6C-201ENST00000341697 RNF149Q8NC42 400 aa21.1■□□□□ 0.97
SEMA6C-201ENST00000341697 SAAL1Q96ER3 474 aa21.1■□□□□ 0.97
SEMA6C-201ENST00000341697 DDR1Q08345 913 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms