RNA–Protein interactions for RNA: ENST00000341394.8

CAPRIN1-201, Transcript of cell cycle associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CAPRIN1, Length 4,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-201ENST00000341394 SMAD1Q15797 465 aaKnown RBP11.37□□□□□ -0.59
CAPRIN1-201ENST00000341394 GADL1Q6ZQY3 521 aa11.37□□□□□ -0.59
CAPRIN1-201ENST00000341394 TADA2BQ86TJ2 420 aa11.37□□□□□ -0.59
CAPRIN1-201ENST00000341394 PRPF38AQ8NAV1 312 aaKnown RBP11.37□□□□□ -0.59
CAPRIN1-201ENST00000341394 CCDC127Q96BQ5 260 aa11.37□□□□□ -0.59
CAPRIN1-201ENST00000341394 RPAP3Q9H6T3 665 aaPredicted RBP11.37□□□□□ -0.59
CAPRIN1-201ENST00000341394 RIC8AQ9NPQ8 531 aa11.37□□□□□ -0.59
CAPRIN1-201ENST00000341394 KIAA1024Q9UPX6 916 aa11.37□□□□□ -0.59
CAPRIN1-201ENST00000341394 MRPL11Q9Y3B7 192 aaKnown RBP11.37□□□□□ -0.59
CAPRIN1-201ENST00000341394 COL2A1P02458 1487 aaPredicted RBP11.37□□□□□ -0.59
CAPRIN1-201ENST00000341394 LRRIQ3A6PVS8 624 aaPredicted RBP11.37□□□□□ -0.59
CAPRIN1-201ENST00000341394 PPFIA4O75335 1185 aa11.37□□□□□ -0.59
CAPRIN1-201ENST00000341394 CALCOCO2Q13137 446 aa11.37□□□□□ -0.59
CAPRIN1-201ENST00000341394 GPBP1Q86WP2 473 aa11.37□□□□□ -0.59
CAPRIN1-201ENST00000341394 CACNA2D3Q8IZS8 1091 aa11.37□□□□□ -0.59
CAPRIN1-201ENST00000341394 FAM167BQ9BTA0 163 aa11.37□□□□□ -0.59
CAPRIN1-201ENST00000341394 FUT8Q9BYC5 575 aa11.37□□□□□ -0.59
CAPRIN1-201ENST00000341394 OR52Z1P0C646 297 aa11.37□□□□□ -0.59
CAPRIN1-201ENST00000341394 CD44P16070 742 aaKnown RBP11.37□□□□□ -0.59
CAPRIN1-201ENST00000341394 PRR16Q569H4 304 aa11.37□□□□□ -0.59
CAPRIN1-201ENST00000341394 MYCT1Q8N699 235 aa11.37□□□□□ -0.59
CAPRIN1-201ENST00000341394 MTMR8Q96EF0 704 aa11.37□□□□□ -0.59
CAPRIN1-201ENST00000341394 TCHPQ9BT92 498 aa11.37□□□□□ -0.59
CAPRIN1-201ENST00000341394 RAVER2Q9HCJ3 691 aaKnown RBP11.37□□□□□ -0.59
CAPRIN1-201ENST00000341394 INTUQ9ULD6 942 aa11.37□□□□□ -0.59
CAPRIN1-201ENST00000341394 OPLAHO14841 1288 aa11.36□□□□□ -0.59
CAPRIN1-201ENST00000341394 RGS16O15492 202 aaPredicted RBP11.36□□□□□ -0.59
CAPRIN1-201ENST00000341394 POLR2MP0CAP2 368 aa11.36□□□□□ -0.59
CAPRIN1-201ENST00000341394 COPB2P35606 906 aa11.36□□□□□ -0.59
CAPRIN1-201ENST00000341394 ATP2C1P98194 919 aaPredicted RBP11.36□□□□□ -0.59
CAPRIN1-201ENST00000341394 ADAM9Q13443 819 aa11.36□□□□□ -0.59
CAPRIN1-201ENST00000341394 TRIM14Q14142 442 aa11.36□□□□□ -0.59
CAPRIN1-201ENST00000341394 APBB1IPQ7Z5R6 666 aaPredicted RBP11.36□□□□□ -0.59
CAPRIN1-201ENST00000341394 CCDC63Q8NA47 563 aa11.36□□□□□ -0.59
CAPRIN1-201ENST00000341394 OTUD5Q96G74 571 aa11.36□□□□□ -0.59
CAPRIN1-201ENST00000341394 MTRQ99707 1265 aa11.36□□□□□ -0.59
CAPRIN1-201ENST00000341394 ELP3Q9H9T3 547 aa11.36□□□□□ -0.59
CAPRIN1-201ENST00000341394 ODF2LQ9ULJ1 636 aa11.36□□□□□ -0.59
CAPRIN1-201ENST00000341394 WDR91A4D1P6 747 aa11.36□□□□□ -0.59
CAPRIN1-201ENST00000341394 ZSCAN5CA6NGD5 496 aaPredicted RBP11.36□□□□□ -0.59
CAPRIN1-201ENST00000341394 TMOD1P28289 359 aa11.36□□□□□ -0.59
CAPRIN1-201ENST00000341394 LPAR1Q92633 364 aa11.36□□□□□ -0.59
CAPRIN1-201ENST00000341394 RSRC1Q96IZ7 334 aaKnown RBP11.36□□□□□ -0.59
CAPRIN1-201ENST00000341394 PYM1Q9BRP8 204 aaKnown RBP11.36□□□□□ -0.59
CAPRIN1-201ENST00000341394 ANO3Q9BYT9 981 aa11.36□□□□□ -0.59
CAPRIN1-201ENST00000341394 FAM237AA0A1B0GTK4 181 aa11.36□□□□□ -0.59
CAPRIN1-201ENST00000341394 WDR46O15213 610 aaKnown RBP11.36□□□□□ -0.59
CAPRIN1-201ENST00000341394 MESDQ14696 234 aa11.36□□□□□ -0.59
CAPRIN1-201ENST00000341394 PPP1R18Q6NYC8 613 aa11.36□□□□□ -0.59
CAPRIN1-201ENST00000341394 LDHDQ86WU2 507 aa11.36□□□□□ -0.59
CAPRIN1-201ENST00000341394 POTEDQ86YR6 584 aa11.36□□□□□ -0.59
CAPRIN1-201ENST00000341394 MB21D1Q8N884 522 aa11.36□□□□□ -0.59
CAPRIN1-201ENST00000341394 EHMT1Q9H9B1 1298 aa11.36□□□□□ -0.59
CAPRIN1-201ENST00000341394 DDX25Q9UHL0 483 aaKnown RBP11.36□□□□□ -0.59
CAPRIN1-201ENST00000341394 PCDHA13Q9Y5I0 950 aa11.36□□□□□ -0.59
CAPRIN1-201ENST00000341394 ESYT2A0FGR8 921 aa11.35□□□□□ -0.59
CAPRIN1-201ENST00000341394 SLC37A4O43826 429 aa11.35□□□□□ -0.59
CAPRIN1-201ENST00000341394 TDP2O95551 362 aa11.35□□□□□ -0.59
CAPRIN1-201ENST00000341394 GYPCP04921 128 aa11.35□□□□□ -0.59
CAPRIN1-201ENST00000341394 NR1D1P20393 614 aa11.35□□□□□ -0.59
CAPRIN1-201ENST00000341394 MAGEA9P43362 315 aa11.35□□□□□ -0.59
CAPRIN1-201ENST00000341394 MDM2Q00987 491 aaPredicted RBP11.35□□□□□ -0.59
CAPRIN1-201ENST00000341394 CETN1Q12798 172 aa11.35□□□□□ -0.59
CAPRIN1-201ENST00000341394 CCDC65Q8IXS2 484 aa11.35□□□□□ -0.59
CAPRIN1-201ENST00000341394 DAGLBQ8NCG7 672 aa11.35□□□□□ -0.59
CAPRIN1-201ENST00000341394 TSGA10Q9BZW7 698 aa11.35□□□□□ -0.59
CAPRIN1-201ENST00000341394 PPP2R3BQ9Y5P8 575 aa11.35□□□□□ -0.59
CAPRIN1-201ENST00000341394 SSC5DA1L4H1 1573 aa11.35□□□□□ -0.59
CAPRIN1-201ENST00000341394 LRRC53A6NM62 1247 aa11.35□□□□□ -0.59
CAPRIN1-201ENST00000341394 ACTN4O43707 911 aaKnown RBP11.35□□□□□ -0.59
CAPRIN1-201ENST00000341394 PALMO75781 387 aa11.35□□□□□ -0.59
CAPRIN1-201ENST00000341394 GFPT2O94808 682 aa11.35□□□□□ -0.59
CAPRIN1-201ENST00000341394 CYP4F22Q6NT55 531 aa11.35□□□□□ -0.59
CAPRIN1-201ENST00000341394 HS2ST1Q7LGA3 356 aa11.35□□□□□ -0.59
CAPRIN1-201ENST00000341394 RETREG2Q8NC44 543 aa11.35□□□□□ -0.59
CAPRIN1-201ENST00000341394 CCDC26Q8TAB7 109 aa11.35□□□□□ -0.59
CAPRIN1-201ENST00000341394 PPP1R14CQ8TAE6 165 aa11.35□□□□□ -0.59
CAPRIN1-201ENST00000341394 COG1Q8WTW3 980 aa11.35□□□□□ -0.59
CAPRIN1-201ENST00000341394 STIM2Q9P246 746 aa11.35□□□□□ -0.59
CAPRIN1-201ENST00000341394 PHIPQ8WWQ0 1821 aa11.35□□□□□ -0.59
CAPRIN1-201ENST00000341394 A0A087WUV0 522 aaPredicted RBP11.35□□□□□ -0.59
CAPRIN1-201ENST00000341394 GLTPD2A6NH11 291 aa11.35□□□□□ -0.59
CAPRIN1-201ENST00000341394 CCDC169A6NNP5 214 aa11.35□□□□□ -0.59
CAPRIN1-201ENST00000341394 H2AFXP16104 143 aaPredicted RBP11.35□□□□□ -0.59
CAPRIN1-201ENST00000341394 BACE1P56817 501 aa11.35□□□□□ -0.59
CAPRIN1-201ENST00000341394 PPP2R5DQ14738 602 aa11.35□□□□□ -0.59
CAPRIN1-201ENST00000341394 NCAPHQ15003 741 aa11.35□□□□□ -0.59
CAPRIN1-201ENST00000341394 FAM47EQ6ZV65 393 aa11.35□□□□□ -0.59
CAPRIN1-201ENST00000341394 AGBL1Q96MI9 1066 aa11.35□□□□□ -0.59
CAPRIN1-201ENST00000341394 ELAC2Q9BQ52 826 aaKnown RBP11.35□□□□□ -0.59
CAPRIN1-201ENST00000341394 PCIF1Q9H4Z3 704 aa11.35□□□□□ -0.59
CAPRIN1-201ENST00000341394 EXOC3O60645 756 aa11.34□□□□□ -0.59
CAPRIN1-201ENST00000341394 FOSP01100 380 aaPredicted RBP11.34□□□□□ -0.59
CAPRIN1-201ENST00000341394 TUBBP07437 444 aa11.34□□□□□ -0.59
CAPRIN1-201ENST00000341394 PTPRAP18433 802 aa11.34□□□□□ -0.59
CAPRIN1-201ENST00000341394 IFI16Q16666 785 aaKnown RBP11.34□□□□□ -0.59
CAPRIN1-201ENST00000341394 MAP1SQ66K74 1059 aaPredicted RBP11.34□□□□□ -0.59
CAPRIN1-201ENST00000341394 KAZNQ674X7 775 aa11.34□□□□□ -0.59
CAPRIN1-201ENST00000341394 SLC30A10Q6XR72 485 aa11.34□□□□□ -0.59
CAPRIN1-201ENST00000341394 MOB2Q70IA6 237 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms