RNA–Protein interactions for RNA: ENST00000341060.3

TDP2-201, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TDP2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-201ENST00000341060 PBKQ96KB5 322 aa15.89■□□□□ 0.13
TDP2-201ENST00000341060 PARVGQ9HBI0 331 aa15.89■□□□□ 0.13
TDP2-201ENST00000341060 SEL1LQ9UBV2 794 aa15.89■□□□□ 0.13
TDP2-201ENST00000341060 INTUQ9ULD6 942 aa15.89■□□□□ 0.13
TDP2-201ENST00000341060 NFU1Q9UMS0 254 aa15.89■□□□□ 0.13
TDP2-201ENST00000341060 A0A0A6YYK5 440 aaPredicted RBP15.89■□□□□ 0.13
TDP2-201ENST00000341060 ESYT3A0FGR9 886 aa15.89■□□□□ 0.13
TDP2-201ENST00000341060 KCNK3O14649 394 aa15.89■□□□□ 0.13
TDP2-201ENST00000341060 PPFIA4O75335 1185 aa15.89■□□□□ 0.13
TDP2-201ENST00000341060 NMT1P30419 496 aaKnown RBP15.89■□□□□ 0.13
TDP2-201ENST00000341060 PSMC2P35998 433 aaKnown RBP15.89■□□□□ 0.13
TDP2-201ENST00000341060 PRELPP51888 382 aa15.89■□□□□ 0.13
TDP2-201ENST00000341060 ZNF131P52739 623 aa15.89■□□□□ 0.13
TDP2-201ENST00000341060 KIAA1755Q5JYT7 1200 aa15.89■□□□□ 0.13
TDP2-201ENST00000341060 FOXR1Q6PIV2 292 aa15.89■□□□□ 0.13
TDP2-201ENST00000341060 FAM186BQ8IYM0 893 aa15.89■□□□□ 0.13
TDP2-201ENST00000341060 ACTRT1Q8TDG2 376 aa15.89■□□□□ 0.13
TDP2-201ENST00000341060 FIZ1Q96SL8 496 aa15.89■□□□□ 0.13
TDP2-201ENST00000341060 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.89■□□□□ 0.13
TDP2-201ENST00000341060 GOPCQ9HD26 462 aa15.89■□□□□ 0.13
TDP2-201ENST00000341060 KCND2Q9NZV8 630 aa15.89■□□□□ 0.13
TDP2-201ENST00000341060 TMX2Q9Y320 296 aa15.89■□□□□ 0.13
TDP2-201ENST00000341060 CHMP2AO43633 222 aa15.88■□□□□ 0.13
TDP2-201ENST00000341060 FERP16591 822 aa15.88■□□□□ 0.13
TDP2-201ENST00000341060 NOP2P46087 812 aaKnown RBP15.88■□□□□ 0.13
TDP2-201ENST00000341060 TPCN2Q8NHX9 752 aa15.88■□□□□ 0.13
TDP2-201ENST00000341060 ZIM3Q96PE6 472 aa15.88■□□□□ 0.13
TDP2-201ENST00000341060 TRERF1Q96PN7 1200 aa15.88■□□□□ 0.13
TDP2-201ENST00000341060 TSPYL1Q9H0U9 437 aa15.88■□□□□ 0.13
TDP2-201ENST00000341060 RRP15Q9Y3B9 282 aaKnown RBP15.88■□□□□ 0.13
TDP2-201ENST00000341060 GCOM1H8Y6P7 765 aaPredicted RBP15.88■□□□□ 0.13
TDP2-201ENST00000341060 MYO1CO00159 1063 aa15.88■□□□□ 0.13
TDP2-201ENST00000341060 RAD51CO43502 376 aa15.88■□□□□ 0.13
TDP2-201ENST00000341060 GFPT2O94808 682 aa15.88■□□□□ 0.13
TDP2-201ENST00000341060 POLR2MP0CAP2 368 aa15.88■□□□□ 0.13
TDP2-201ENST00000341060 ZBTB48P10074 688 aaPredicted RBP15.88■□□□□ 0.13
TDP2-201ENST00000341060 ZC2HC1CQ53FD0 456 aaPredicted RBP15.88■□□□□ 0.13
TDP2-201ENST00000341060 GJB7Q6PEY0 223 aa15.88■□□□□ 0.13
TDP2-201ENST00000341060 SLC30A10Q6XR72 485 aa15.88■□□□□ 0.13
TDP2-201ENST00000341060 SLFN11Q7Z7L1 901 aa15.88■□□□□ 0.13
TDP2-201ENST00000341060 WHAMMQ8TF30 809 aa15.88■□□□□ 0.13
TDP2-201ENST00000341060 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.88■□□□□ 0.13
TDP2-201ENST00000341060 CALR3Q96L12 384 aaKnown RBP15.88■□□□□ 0.13
TDP2-201ENST00000341060 RANBP17Q9H2T7 1088 aaKnown RBP15.88■□□□□ 0.13
TDP2-201ENST00000341060 GOLPH3Q9H4A6 298 aa15.88■□□□□ 0.13
TDP2-201ENST00000341060 LCMT1Q9UIC8 334 aa15.88■□□□□ 0.13
TDP2-201ENST00000341060 ODF2LQ9ULJ1 636 aa15.88■□□□□ 0.13
TDP2-201ENST00000341060 DDX3XO00571 662 aaKnown RBP eCLIP15.87■□□□□ 0.13
TDP2-201ENST00000341060 ZBTB39O15060 712 aa15.87■□□□□ 0.13
TDP2-201ENST00000341060 GAS7O60861 476 aa15.87■□□□□ 0.13
TDP2-201ENST00000341060 H2AFZP0C0S5 128 aa15.87■□□□□ 0.13
TDP2-201ENST00000341060 FAM153BP0C7A2 387 aa15.87■□□□□ 0.13
TDP2-201ENST00000341060 FMO5P49326 533 aa15.87■□□□□ 0.13
TDP2-201ENST00000341060 RNASE9P60153 205 aaKnown RBP15.87■□□□□ 0.13
TDP2-201ENST00000341060 FAM153CQ494X1 144 aa15.87■□□□□ 0.13
TDP2-201ENST00000341060 CEP55Q53EZ4 464 aa15.87■□□□□ 0.13
TDP2-201ENST00000341060 TTMPQ5BVD1 217 aa15.87■□□□□ 0.13
TDP2-201ENST00000341060 H2AFVQ71UI9 128 aa15.87■□□□□ 0.13
TDP2-201ENST00000341060 ZNF720Q7Z2F6 126 aa15.87■□□□□ 0.13
TDP2-201ENST00000341060 IQCKQ8N0W5 287 aa15.87■□□□□ 0.13
TDP2-201ENST00000341060 EIF1ADQ8N9N8 165 aaKnown RBP15.87■□□□□ 0.13
TDP2-201ENST00000341060 ACER1Q8TDN7 264 aa15.87■□□□□ 0.13
TDP2-201ENST00000341060 CASKIN2Q8WXE0 1202 aa15.87■□□□□ 0.13
TDP2-201ENST00000341060 IFT81Q8WYA0 676 aa15.87■□□□□ 0.13
TDP2-201ENST00000341060 IKZF4Q9H2S9 585 aa15.87■□□□□ 0.13
TDP2-201ENST00000341060 EHMT1Q9H9B1 1298 aa15.87■□□□□ 0.13
TDP2-201ENST00000341060 FAM153AQ9UHL3 310 aa15.87■□□□□ 0.13
TDP2-201ENST00000341060 YDJCA8MPS7 323 aa15.86■□□□□ 0.13
TDP2-201ENST00000341060 F8VZ95 297 aa15.86■□□□□ 0.13
TDP2-201ENST00000341060 EVI5O60447 810 aa15.86■□□□□ 0.13
TDP2-201ENST00000341060 VIL1P09327 827 aaKnown RBP15.86■□□□□ 0.13
TDP2-201ENST00000341060 STAT1P42224 750 aa15.86■□□□□ 0.13
TDP2-201ENST00000341060 NPEPPSP55786 919 aa15.86■□□□□ 0.13
TDP2-201ENST00000341060 SETQ01105 290 aaPredicted RBP15.86■□□□□ 0.13
TDP2-201ENST00000341060 STXBP4Q6ZWJ1 553 aa15.86■□□□□ 0.13
TDP2-201ENST00000341060 DNAAF5Q86Y56 855 aa15.86■□□□□ 0.13
TDP2-201ENST00000341060 FAM178BQ8IXR5 827 aa15.86■□□□□ 0.13
TDP2-201ENST00000341060 OLIG1Q8TAK6 271 aa15.86■□□□□ 0.13
TDP2-201ENST00000341060 SCFD2Q8WU76 684 aa15.86■□□□□ 0.13
TDP2-201ENST00000341060 LMBR1Q8WVP7 490 aa15.86■□□□□ 0.13
TDP2-201ENST00000341060 NACC1Q96RE7 527 aa15.86■□□□□ 0.13
TDP2-201ENST00000341060 WDR11Q9BZH6 1224 aa15.86■□□□□ 0.13
TDP2-201ENST00000341060 TMOD2Q9NZR1 351 aa15.86■□□□□ 0.13
TDP2-201ENST00000341060 SOX5P35711 763 aa15.86■□□□□ 0.13
TDP2-201ENST00000341060 COG2Q14746 738 aa15.86■□□□□ 0.13
TDP2-201ENST00000341060 CCDC174Q6PII3 467 aa15.86■□□□□ 0.13
TDP2-201ENST00000341060 HS2ST1Q7LGA3 356 aa15.86■□□□□ 0.13
TDP2-201ENST00000341060 SYCE1Q8N0S2 351 aa15.86■□□□□ 0.13
TDP2-201ENST00000341060 SLC30A5Q8TAD4 765 aa15.86■□□□□ 0.13
TDP2-201ENST00000341060 CHURC1Q8WUH1 139 aa15.86■□□□□ 0.13
TDP2-201ENST00000341060 C7orf43Q8WVR3 580 aa15.86■□□□□ 0.13
TDP2-201ENST00000341060 CNKSR1Q969H4 720 aa15.86■□□□□ 0.13
TDP2-201ENST00000341060 ARL8AQ96BM9 186 aa15.86■□□□□ 0.13
TDP2-201ENST00000341060 CCDC43Q96MW1 224 aaKnown RBP15.86■□□□□ 0.13
TDP2-201ENST00000341060 CAPS2Q9BXY5 557 aa15.86■□□□□ 0.13
TDP2-201ENST00000341060 DMAC2Q9NW81 257 aa15.86■□□□□ 0.13
TDP2-201ENST00000341060 WRAP73Q9P2S5 460 aaPredicted RBP15.86■□□□□ 0.13
TDP2-201ENST00000341060 PGRMC1O00264 195 aaKnown RBP15.85■□□□□ 0.13
TDP2-201ENST00000341060 PPP2R5AQ15172 486 aa15.85■□□□□ 0.13
TDP2-201ENST00000341060 B3GNT9Q6UX72 402 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 181.6 ms