RNA–Protein interactions for RNA: ENST00000340829.9

CDK13-202, Transcript of cyclin dependent kinase 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDK13, Length 5,066 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK13-202ENST00000340829 SPATA24Q86W54 205 aa20.84■□□□□ 0.93
CDK13-202ENST00000340829 ADAM21Q9UKJ8 722 aa20.84■□□□□ 0.93
CDK13-202ENST00000340829 SNX24Q9Y343 169 aa20.84■□□□□ 0.93
CDK13-202ENST00000340829 INHBAP08476 426 aa20.83■□□□□ 0.93
CDK13-202ENST00000340829 CLTAP09496 248 aa20.83■□□□□ 0.93
CDK13-202ENST00000340829 CLNS1AP54105 237 aaKnown RBP20.83■□□□□ 0.93
CDK13-202ENST00000340829 SEMA3FQ13275 785 aa20.83■□□□□ 0.93
CDK13-202ENST00000340829 C16orf86Q6ZW13 317 aa20.83■□□□□ 0.93
CDK13-202ENST00000340829 CRAMP1Q96RY5 1269 aa20.83■□□□□ 0.93
CDK13-202ENST00000340829 CNOT8Q9UFF9 292 aaKnown RBP20.83■□□□□ 0.93
CDK13-202ENST00000340829 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.83■□□□□ 0.93
CDK13-202ENST00000340829 KIF20BQ96Q89 1820 aa20.83■□□□□ 0.93
CDK13-202ENST00000340829 DEPDC5O75140 1603 aa20.83■□□□□ 0.93
CDK13-202ENST00000340829 PALM3A6NDB9 673 aaPredicted RBP20.83■□□□□ 0.93
CDK13-202ENST00000340829 ZNF746Q6NUN9 644 aaPredicted RBP20.83■□□□□ 0.93
CDK13-202ENST00000340829 ZMYND12Q9H0C1 365 aa20.83■□□□□ 0.93
CDK13-202ENST00000340829 ATP6V0A4Q9HBG4 840 aa20.83■□□□□ 0.93
CDK13-202ENST00000340829 ZCCHC17Q9NP64 241 aaKnown RBP20.83■□□□□ 0.93
CDK13-202ENST00000340829 ANAPC7Q9UJX3 599 aa20.83■□□□□ 0.93
CDK13-202ENST00000340829 DENND3A2RUS2 1198 aa20.83■□□□□ 0.93
CDK13-202ENST00000340829 SLMAPQ14BN4 828 aa20.83■□□□□ 0.93
CDK13-202ENST00000340829 PDXDC1Q6P996 788 aa20.83■□□□□ 0.93
CDK13-202ENST00000340829 LMNTD2Q8IXW0 634 aa20.83■□□□□ 0.93
CDK13-202ENST00000340829 FAM213AQ9BRX8 229 aa20.83■□□□□ 0.93
CDK13-202ENST00000340829 BASP1P80723 227 aaKnown RBP20.83■□□□□ 0.92
CDK13-202ENST00000340829 IL9RQ01113 521 aa20.83■□□□□ 0.92
CDK13-202ENST00000340829 GLE1Q53GS7 698 aaKnown RBP20.83■□□□□ 0.92
CDK13-202ENST00000340829 PDZD4Q76G19 769 aaPredicted RBP20.83■□□□□ 0.92
CDK13-202ENST00000340829 AFAP1L2Q8N4X5 818 aa20.83■□□□□ 0.92
CDK13-202ENST00000340829 MCPH1Q8NEM0 835 aa20.83■□□□□ 0.92
CDK13-202ENST00000340829 PLAAQ9Y263 795 aa20.83■□□□□ 0.92
CDK13-202ENST00000340829 RASGRF2O14827 1237 aa20.82■□□□□ 0.92
CDK13-202ENST00000340829 RHOBTB3O94955 611 aa20.82■□□□□ 0.92
CDK13-202ENST00000340829 ABL1P00519 1130 aa20.82■□□□□ 0.92
CDK13-202ENST00000340829 VPS72Q15906 364 aa20.82■□□□□ 0.92
CDK13-202ENST00000340829 SLFN12LQ6IEE8 588 aa20.82■□□□□ 0.92
CDK13-202ENST00000340829 OR6B2Q6IFH4 312 aa20.82■□□□□ 0.92
CDK13-202ENST00000340829 TC2NQ8N9U0 490 aa20.82■□□□□ 0.92
CDK13-202ENST00000340829 GIPC1O14908 333 aa20.82■□□□□ 0.92
CDK13-202ENST00000340829 KRT76Q01546 638 aa20.82■□□□□ 0.92
CDK13-202ENST00000340829 TROAPQ12815 778 aa20.82■□□□□ 0.92
CDK13-202ENST00000340829 TSNAXIP1Q2TAA8 658 aa20.82■□□□□ 0.92
CDK13-202ENST00000340829 INTS5Q6P9B9 1019 aaKnown RBP20.82■□□□□ 0.92
CDK13-202ENST00000340829 RNF10Q8N5U6 811 aaKnown RBP20.82■□□□□ 0.92
CDK13-202ENST00000340829 PRPF38AQ8NAV1 312 aaKnown RBP20.82■□□□□ 0.92
CDK13-202ENST00000340829 NUB1Q9Y5A7 615 aa20.82■□□□□ 0.92
CDK13-202ENST00000340829 CD2APQ9Y5K6 639 aa20.82■□□□□ 0.92
CDK13-202ENST00000340829 MCF2LO15068 1137 aa20.82■□□□□ 0.92
CDK13-202ENST00000340829 SUN1O94901 812 aa20.82■□□□□ 0.92
CDK13-202ENST00000340829 PDHBP11177 359 aa20.82■□□□□ 0.92
CDK13-202ENST00000340829 SAT1P21673 171 aa20.82■□□□□ 0.92
CDK13-202ENST00000340829 VAMP7P51809 220 aa20.82■□□□□ 0.92
CDK13-202ENST00000340829 INTS2Q9H0H0 1204 aaKnown RBP20.82■□□□□ 0.92
CDK13-202ENST00000340829 NEURL4Q96JN8 1562 aa20.82■□□□□ 0.92
CDK13-202ENST00000340829 MED7O43513 233 aa20.82■□□□□ 0.92
CDK13-202ENST00000340829 NMT1P30419 496 aaKnown RBP20.82■□□□□ 0.92
CDK13-202ENST00000340829 ZNF211Q13398 564 aaPredicted RBP20.82■□□□□ 0.92
CDK13-202ENST00000340829 PPP1R2P3Q6NXS1 205 aa20.82■□□□□ 0.92
CDK13-202ENST00000340829 PASD1Q8IV76 773 aa20.82■□□□□ 0.92
CDK13-202ENST00000340829 SAAL1Q96ER3 474 aa20.82■□□□□ 0.92
CDK13-202ENST00000340829 EXOC8Q8IYI6 725 aa20.81■□□□□ 0.92
CDK13-202ENST00000340829 PPP4R1Q8TF05 950 aa20.81■□□□□ 0.92
CDK13-202ENST00000340829 RPS6KC1Q96S38 1066 aa20.81■□□□□ 0.92
CDK13-202ENST00000340829 AGPAT5Q9NUQ2 364 aa20.81■□□□□ 0.92
CDK13-202ENST00000340829 MYMKA6NI61 221 aa20.81■□□□□ 0.92
CDK13-202ENST00000340829 TADA3O75528 432 aa20.81■□□□□ 0.92
CDK13-202ENST00000340829 GPC5P78333 572 aa20.81■□□□□ 0.92
CDK13-202ENST00000340829 CDC42EP5Q6NZY7 148 aa20.81■□□□□ 0.92
CDK13-202ENST00000340829 LDHDQ86WU2 507 aa20.81■□□□□ 0.92
CDK13-202ENST00000340829 KCTD6Q8NC69 237 aa20.81■□□□□ 0.92
CDK13-202ENST00000340829 C7orf25Q9BPX7 421 aa20.81■□□□□ 0.92
CDK13-202ENST00000340829 GABBR1Q9UBS5 961 aa20.81■□□□□ 0.92
CDK13-202ENST00000340829 SEL1LQ9UBV2 794 aa20.81■□□□□ 0.92
CDK13-202ENST00000340829 RIMBP3CA6NJZ7 1639 aa20.81■□□□□ 0.92
CDK13-202ENST00000340829 RIMBP3BA6NNM3 1639 aa20.81■□□□□ 0.92
CDK13-202ENST00000340829 RIMBP3Q9UFD9 1639 aa20.81■□□□□ 0.92
CDK13-202ENST00000340829 ACSL3O95573 720 aa20.81■□□□□ 0.92
CDK13-202ENST00000340829 GGCXP38435 758 aa20.81■□□□□ 0.92
CDK13-202ENST00000340829 MKRN3Q13064 507 aaKnown RBP20.81■□□□□ 0.92
CDK13-202ENST00000340829 PSMD6Q15008 389 aa20.81■□□□□ 0.92
CDK13-202ENST00000340829 GLYCTKQ8IVS8 523 aa20.81■□□□□ 0.92
CDK13-202ENST00000340829 ADAM22Q9P0K1 906 aa20.81■□□□□ 0.92
CDK13-202ENST00000340829 HERC5Q9UII4 1024 aaKnown RBP20.81■□□□□ 0.92
CDK13-202ENST00000340829 KDM6AO15550 1401 aaPredicted RBP20.81■□□□□ 0.92
CDK13-202ENST00000340829 NDUFB10O96000 172 aa20.81■□□□□ 0.92
CDK13-202ENST00000340829 STXBP2Q15833 593 aa20.81■□□□□ 0.92
CDK13-202ENST00000340829 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.81■□□□□ 0.92
CDK13-202ENST00000340829 NSUN6Q8TEA1 469 aaKnown RBP20.81■□□□□ 0.92
CDK13-202ENST00000340829 RPF1Q9H9Y2 349 aaKnown RBP20.81■□□□□ 0.92
CDK13-202ENST00000340829 SWSAP1Q6NVH7 229 aa20.8■□□□□ 0.92
CDK13-202ENST00000340829 RAD9BQ6WBX8 426 aa20.8■□□□□ 0.92
CDK13-202ENST00000340829 TPD52P55327 224 aaPredicted RBP20.8■□□□□ 0.92
CDK13-202ENST00000340829 PTPAQ15257 358 aa20.8■□□□□ 0.92
CDK13-202ENST00000340829 HEXIM2Q96MH2 286 aaKnown RBP20.8■□□□□ 0.92
CDK13-202ENST00000340829 DDX47Q9H0S4 455 aaKnown RBP20.8■□□□□ 0.92
CDK13-202ENST00000340829 XPOTO43592 962 aaKnown RBP20.8■□□□□ 0.92
CDK13-202ENST00000340829 CEP55Q53EZ4 464 aa20.8■□□□□ 0.92
CDK13-202ENST00000340829 PDS5AQ29RF7 1337 aaKnown RBP20.8■□□□□ 0.92
CDK13-202ENST00000340829 EYA4O95677 639 aa20.8■□□□□ 0.92
CDK13-202ENST00000340829 SRGNP10124 158 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms