RNA–Protein interactions for RNA: ENST00000340157.8

VRK2-201, Transcript of vaccinia related kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK2, Length 1,888 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-201ENST00000340157 CYP26B1Q9NR63 512 aa23.38■■□□□ 1.33
VRK2-201ENST00000340157 TYW1Q9NV66 732 aaKnown RBP23.38■■□□□ 1.33
VRK2-201ENST00000340157 MAPK4P31152 587 aa23.37■■□□□ 1.33
VRK2-201ENST00000340157 TAF1CQ15572 869 aaPredicted RBP23.37■■□□□ 1.33
VRK2-201ENST00000340157 XKR3Q5GH77 459 aa23.37■■□□□ 1.33
VRK2-201ENST00000340157 TAPT1Q6NXT6 567 aa23.37■■□□□ 1.33
VRK2-201ENST00000340157 TC2NQ8N9U0 490 aa23.37■■□□□ 1.33
VRK2-201ENST00000340157 GPR20Q99678 358 aa23.37■■□□□ 1.33
VRK2-201ENST00000340157 MLXIPQ9HAP2 919 aa23.37■■□□□ 1.33
VRK2-201ENST00000340157 XPNPEP1Q9NQW7 623 aa23.37■■□□□ 1.33
VRK2-201ENST00000340157 UBE4BO95155 1302 aa23.37■■□□□ 1.33
VRK2-201ENST00000340157 OATP04181 439 aa23.36■■□□□ 1.33
VRK2-201ENST00000340157 TCF7P36402 384 aaPredicted RBP23.36■■□□□ 1.33
VRK2-201ENST00000340157 SOX10P56693 466 aa23.36■■□□□ 1.33
VRK2-201ENST00000340157 DRC1Q96MC2 740 aa23.36■■□□□ 1.33
VRK2-201ENST00000340157 CEP89Q96ST8 783 aa23.36■■□□□ 1.33
VRK2-201ENST00000340157 NOC4LQ9BVI4 516 aaKnown RBP23.36■■□□□ 1.33
VRK2-201ENST00000340157 LARSQ9P2J5 1176 aaKnown RBP23.36■■□□□ 1.33
VRK2-201ENST00000340157 SNAI1O95863 264 aaPredicted RBP23.36■■□□□ 1.33
VRK2-201ENST00000340157 GYPCP04921 128 aa23.36■■□□□ 1.33
VRK2-201ENST00000340157 SKILP12757 684 aa23.36■■□□□ 1.33
VRK2-201ENST00000340157 ADAM9Q13443 819 aa23.36■■□□□ 1.33
VRK2-201ENST00000340157 FAM102BQ5T8I3 360 aa23.36■■□□□ 1.33
VRK2-201ENST00000340157 MAMDC4Q6UXC1 1216 aa23.36■■□□□ 1.33
VRK2-201ENST00000340157 AFAP1L1Q8TED9 768 aa23.36■■□□□ 1.33
VRK2-201ENST00000340157 SEPT1Q8WYJ6 367 aa23.36■■□□□ 1.33
VRK2-201ENST00000340157 ZIC5Q96T25 663 aa23.36■■□□□ 1.33
VRK2-201ENST00000340157 DIS3Q9Y2L1 958 aaKnown RBP23.36■■□□□ 1.33
VRK2-201ENST00000340157 TXNP10599 105 aaKnown RBP23.35■■□□□ 1.33
VRK2-201ENST00000340157 MAPTP10636 758 aaKnown RBP23.35■■□□□ 1.33
VRK2-201ENST00000340157 NR2F2P24468 414 aa23.35■■□□□ 1.33
VRK2-201ENST00000340157 ADKP55263 362 aaKnown RBP23.35■■□□□ 1.33
VRK2-201ENST00000340157 RBL2Q08999 1139 aa23.35■■□□□ 1.33
VRK2-201ENST00000340157 NPLOC4Q8TAT6 608 aa23.35■■□□□ 1.33
VRK2-201ENST00000340157 SCFD2Q8WU76 684 aa23.35■■□□□ 1.33
VRK2-201ENST00000340157 BSNDQ8WZ55 320 aa23.35■■□□□ 1.33
VRK2-201ENST00000340157 MAML3Q96JK9 1138 aa23.35■■□□□ 1.33
VRK2-201ENST00000340157 TMX1Q9H3N1 280 aa23.35■■□□□ 1.33
VRK2-201ENST00000340157 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.35■■□□□ 1.33
VRK2-201ENST00000340157 K7ENM7 598 aa23.34■■□□□ 1.33
VRK2-201ENST00000340157 DNM2P50570 870 aa23.34■■□□□ 1.33
VRK2-201ENST00000340157 MARSP56192 900 aaKnown RBP23.34■■□□□ 1.33
VRK2-201ENST00000340157 TTLL4Q14679 1199 aa23.34■■□□□ 1.33
VRK2-201ENST00000340157 MAN2A1Q16706 1144 aa23.34■■□□□ 1.33
VRK2-201ENST00000340157 MTERF2Q49AM1 385 aa23.34■■□□□ 1.33
VRK2-201ENST00000340157 DPP9Q86TI2 863 aa23.34■■□□□ 1.33
VRK2-201ENST00000340157 TMEM139Q8IV31 216 aa23.34■■□□□ 1.33
VRK2-201ENST00000340157 A0A1W2PQC6 194 aa23.34■■□□□ 1.33
VRK2-201ENST00000340157 RBM47A0AV96 593 aaKnown RBP23.34■■□□□ 1.33
VRK2-201ENST00000340157 RNF225M0QZC1 329 aaPredicted RBP23.34■■□□□ 1.33
VRK2-201ENST00000340157 PES1O00541 588 aaKnown RBP23.34■■□□□ 1.33
VRK2-201ENST00000340157 CALUO43852 315 aaPredicted RBP23.34■■□□□ 1.33
VRK2-201ENST00000340157 DGAT1O75907 488 aa23.34■■□□□ 1.33
VRK2-201ENST00000340157 NR3C1P04150 777 aa23.34■■□□□ 1.33
VRK2-201ENST00000340157 STAT5BP51692 787 aa23.34■■□□□ 1.33
VRK2-201ENST00000340157 PEX3P56589 373 aa23.34■■□□□ 1.33
VRK2-201ENST00000340157 VWA3BQ502W6 1294 aa23.34■■□□□ 1.33
VRK2-201ENST00000340157 C17orf99Q6UX52 265 aa23.34■■□□□ 1.33
VRK2-201ENST00000340157 SMC1BQ8NDV3 1235 aa23.34■■□□□ 1.33
VRK2-201ENST00000340157 NIFKQ9BYG3 293 aaKnown RBP23.34■■□□□ 1.33
VRK2-201ENST00000340157 VTA1Q9NP79 307 aa23.34■■□□□ 1.33
VRK2-201ENST00000340157 PCDHB13Q9Y5F0 798 aa23.34■■□□□ 1.33
VRK2-201ENST00000340157 SLC15A5A6NIM6 579 aa23.33■■□□□ 1.33
VRK2-201ENST00000340157 CLIC2O15247 247 aa23.33■■□□□ 1.33
VRK2-201ENST00000340157 LGR5O75473 907 aa23.33■■□□□ 1.33
VRK2-201ENST00000340157 ECM2O94769 699 aaPredicted RBP23.33■■□□□ 1.33
VRK2-201ENST00000340157 CLCN1P35523 988 aa23.33■■□□□ 1.33
VRK2-201ENST00000340157 FXR1P51114 621 aaKnown RBP eCLIP23.33■■□□□ 1.33
VRK2-201ENST00000340157 NCKAP1LP55160 1127 aa23.33■■□□□ 1.33
VRK2-201ENST00000340157 MORN1Q5T089 497 aa23.33■■□□□ 1.33
VRK2-201ENST00000340157 GJC2Q5T442 439 aaPredicted RBP23.33■■□□□ 1.33
VRK2-201ENST00000340157 TRIM50Q86XT4 487 aa23.33■■□□□ 1.33
VRK2-201ENST00000340157 DHX37Q8IY37 1157 aaKnown RBP23.33■■□□□ 1.33
VRK2-201ENST00000340157 SPATA33Q96N06 139 aa23.33■■□□□ 1.33
VRK2-201ENST00000340157 ST6GALNAC4Q9H4F1 302 aa23.33■■□□□ 1.33
VRK2-201ENST00000340157 ABT1Q9ULW3 272 aaKnown RBP23.33■■□□□ 1.33
VRK2-201ENST00000340157 RASSF10A6NK89 507 aa23.32■■□□□ 1.32
VRK2-201ENST00000340157 CETN3O15182 167 aa23.32■■□□□ 1.32
VRK2-201ENST00000340157 TLR2O60603 784 aa23.32■■□□□ 1.32
VRK2-201ENST00000340157 ARHGAP1Q07960 439 aa23.32■■□□□ 1.32
VRK2-201ENST00000340157 TBC1D8BQ0IIM8 1120 aa23.32■■□□□ 1.32
VRK2-201ENST00000340157 TARBP2Q15633 366 aaKnown RBP23.32■■□□□ 1.32
VRK2-201ENST00000340157 STXBP4Q6ZWJ1 553 aa23.32■■□□□ 1.32
VRK2-201ENST00000340157 TRIM59Q8IWR1 403 aa23.32■■□□□ 1.32
VRK2-201ENST00000340157 NDST4Q9H3R1 872 aa23.32■■□□□ 1.32
VRK2-201ENST00000340157 SLC16A4O15374 487 aa23.32■■□□□ 1.32
VRK2-201ENST00000340157 KLK7P49862 253 aa23.32■■□□□ 1.32
VRK2-201ENST00000340157 INHBEP58166 350 aa23.32■■□□□ 1.32
VRK2-201ENST00000340157 NFIL3Q16649 462 aa23.32■■□□□ 1.32
VRK2-201ENST00000340157 CCDC40Q4G0X9 1142 aa23.32■■□□□ 1.32
VRK2-201ENST00000340157 CPLX3Q8WVH0 158 aa23.32■■□□□ 1.32
VRK2-201ENST00000340157 CCDC102AQ96A19 550 aa23.32■■□□□ 1.32
VRK2-201ENST00000340157 DHX33Q9H6R0 707 aaKnown RBP23.32■■□□□ 1.32
VRK2-201ENST00000340157 ATP6V0A4Q9HBG4 840 aa23.32■■□□□ 1.32
VRK2-201ENST00000340157 AKAP3O75969 853 aa23.31■■□□□ 1.32
VRK2-201ENST00000340157 GNA14O95837 355 aa23.31■■□□□ 1.32
VRK2-201ENST00000340157 TPM2P07951 284 aa23.31■■□□□ 1.32
VRK2-201ENST00000340157 CASP14P31944 242 aa23.31■■□□□ 1.32
VRK2-201ENST00000340157 NPTX2P47972 431 aa23.31■■□□□ 1.32
VRK2-201ENST00000340157 CASP4P49662 377 aa23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms