RNA–Protein interactions for RNA: ENST00000340058.5

RET-201, Transcript of ret proto-oncogene, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RET, Length 4,149 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RET-201ENST00000340058 SNX24Q9Y343 169 aa15.9■□□□□ 0.14
RET-201ENST00000340058 POC1B-GALNT4F8VUJ3 575 aa15.89■□□□□ 0.13
RET-201ENST00000340058 ATP2A2P16615 1042 aaKnown RBP15.89■□□□□ 0.13
RET-201ENST00000340058 IREB2P48200 963 aaKnown RBP15.89■□□□□ 0.13
RET-201ENST00000340058 CCT5P48643 541 aa15.89■□□□□ 0.13
RET-201ENST00000340058 BFSP1Q12934 665 aa15.89■□□□□ 0.13
RET-201ENST00000340058 FAM151AQ8WW52 585 aa15.89■□□□□ 0.13
RET-201ENST00000340058 C11orf70Q9BRQ4 267 aa15.89■□□□□ 0.13
RET-201ENST00000340058 HESX1Q9UBX0 185 aa15.89■□□□□ 0.13
RET-201ENST00000340058 TBK1Q9UHD2 729 aa15.89■□□□□ 0.13
RET-201ENST00000340058 STAM2O75886 525 aa15.89■□□□□ 0.13
RET-201ENST00000340058 PMS1P54277 932 aaKnown RBP15.89■□□□□ 0.13
RET-201ENST00000340058 SGO2Q562F6 1265 aa15.89■□□□□ 0.13
RET-201ENST00000340058 CDR2LQ86X02 465 aaPredicted RBP15.89■□□□□ 0.13
RET-201ENST00000340058 PROM2Q8N271 834 aa15.89■□□□□ 0.13
RET-201ENST00000340058 CCDC97Q96F63 343 aaPredicted RBP15.89■□□□□ 0.13
RET-201ENST00000340058 TSNARE1Q96NA8 513 aa15.89■□□□□ 0.13
RET-201ENST00000340058 CAPN11Q9UMQ6 739 aa15.89■□□□□ 0.13
RET-201ENST00000340058 WNT7AO00755 349 aa15.89■□□□□ 0.13
RET-201ENST00000340058 INPP5BP32019 993 aa15.89■□□□□ 0.13
RET-201ENST00000340058 GRB10Q13322 594 aa15.89■□□□□ 0.13
RET-201ENST00000340058 PPP2R5CQ13362 524 aa15.89■□□□□ 0.13
RET-201ENST00000340058 PPP4R3CPQ6ZMV5 832 aa15.89■□□□□ 0.13
RET-201ENST00000340058 PNMA8AQ86V59 439 aaPredicted RBP15.89■□□□□ 0.13
RET-201ENST00000340058 CEP63Q96MT8 703 aa15.89■□□□□ 0.13
RET-201ENST00000340058 C7orf25Q9BPX7 421 aa15.89■□□□□ 0.13
RET-201ENST00000340058 ELP3Q9H9T3 547 aa15.89■□□□□ 0.13
RET-201ENST00000340058 LRRD1A4D1F6 860 aa15.88■□□□□ 0.13
RET-201ENST00000340058 CLDN3O15551 220 aa15.88■□□□□ 0.13
RET-201ENST00000340058 RNF8O76064 485 aa15.88■□□□□ 0.13
RET-201ENST00000340058 ACOT2P49753 483 aa15.88■□□□□ 0.13
RET-201ENST00000340058 KRT81Q14533 505 aa15.88■□□□□ 0.13
RET-201ENST00000340058 TMEM270Q6UE05 265 aa15.88■□□□□ 0.13
RET-201ENST00000340058 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.88■□□□□ 0.13
RET-201ENST00000340058 MED10Q9BTT4 135 aa15.88■□□□□ 0.13
RET-201ENST00000340058 H0YCG3 227 aa15.88■□□□□ 0.13
RET-201ENST00000340058 POLRMTO00411 1230 aaKnown RBP15.88■□□□□ 0.13
RET-201ENST00000340058 EYA4O95677 639 aa15.88■□□□□ 0.13
RET-201ENST00000340058 TFRCP02786 760 aaKnown RBP15.88■□□□□ 0.13
RET-201ENST00000340058 NT5C2P49902 561 aa15.88■□□□□ 0.13
RET-201ENST00000340058 VAMP7P51809 220 aa15.88■□□□□ 0.13
RET-201ENST00000340058 CDO1Q16878 200 aa15.88■□□□□ 0.13
RET-201ENST00000340058 HOXC10Q9NYD6 342 aa15.88■□□□□ 0.13
RET-201ENST00000340058 EHD2Q9NZN4 543 aa15.88■□□□□ 0.13
RET-201ENST00000340058 KCNG1Q9UIX4 513 aa15.88■□□□□ 0.13
RET-201ENST00000340058 MED24O75448 989 aa15.88■□□□□ 0.13
RET-201ENST00000340058 CC2D1AQ6P1N0 951 aaPredicted RBP15.88■□□□□ 0.13
RET-201ENST00000340058 INTS8Q75QN2 995 aaKnown RBP15.88■□□□□ 0.13
RET-201ENST00000340058 GPRC5CQ9NQ84 441 aa15.88■□□□□ 0.13
RET-201ENST00000340058 TBC1D22BQ9NU19 505 aa15.88■□□□□ 0.13
RET-201ENST00000340058 ANAPC7Q9UJX3 599 aa15.88■□□□□ 0.13
RET-201ENST00000340058 M0QZ92 97 aa15.87■□□□□ 0.13
RET-201ENST00000340058 CAPN9O14815 690 aa15.87■□□□□ 0.13
RET-201ENST00000340058 ENTPD3O75355 529 aa15.87■□□□□ 0.13
RET-201ENST00000340058 FTLP02792 175 aaPredicted RBP15.87■□□□□ 0.13
RET-201ENST00000340058 VSNL1P62760 191 aa15.87■□□□□ 0.13
RET-201ENST00000340058 EPC2Q52LR7 807 aa15.87■□□□□ 0.13
RET-201ENST00000340058 RHPN2Q8IUC4 686 aa15.87■□□□□ 0.13
RET-201ENST00000340058 RPUSD2Q8IZ73 545 aaKnown RBP15.87■□□□□ 0.13
RET-201ENST00000340058 AKT1S1Q96B36 256 aa15.87■□□□□ 0.13
RET-201ENST00000340058 CAPS2Q9BXY5 557 aa15.87■□□□□ 0.13
RET-201ENST00000340058 FHOD1Q9Y613 1164 aa15.87■□□□□ 0.13
RET-201ENST00000340058 RIC1Q4ADV7 1423 aa15.87■□□□□ 0.13
RET-201ENST00000340058 SALL1Q9NSC2 1324 aa15.87■□□□□ 0.13
RET-201ENST00000340058 RPS6P62753 249 aaKnown RBP15.87■□□□□ 0.13
RET-201ENST00000340058 ZKSCAN8Q15776 578 aaPredicted RBP15.87■□□□□ 0.13
RET-201ENST00000340058 NKX2-3Q8TAU0 364 aa15.87■□□□□ 0.13
RET-201ENST00000340058 APBA1Q02410 837 aa15.87■□□□□ 0.13
RET-201ENST00000340058 SHROOM1Q2M3G4 852 aaPredicted RBP15.87■□□□□ 0.13
RET-201ENST00000340058 RBM43Q6ZSC3 357 aaKnown RBP15.87■□□□□ 0.13
RET-201ENST00000340058 APBB1IPQ7Z5R6 666 aaPredicted RBP15.87■□□□□ 0.13
RET-201ENST00000340058 GPATCH11Q8N954 259 aa15.87■□□□□ 0.13
RET-201ENST00000340058 OSBPL9Q96SU4 736 aa15.87■□□□□ 0.13
RET-201ENST00000340058 SEPT10Q9P0V9 454 aa15.87■□□□□ 0.13
RET-201ENST00000340058 CNOT8Q9UFF9 292 aaKnown RBP15.87■□□□□ 0.13
RET-201ENST00000340058 H7C0C1 242 aa15.87■□□□□ 0.13
RET-201ENST00000340058 NR3C2P08235 984 aa15.87■□□□□ 0.13
RET-201ENST00000340058 YWHABP31946 246 aaKnown RBP15.87■□□□□ 0.13
RET-201ENST00000340058 SHMT1P34896 483 aa15.87■□□□□ 0.13
RET-201ENST00000340058 ATP5OP48047 213 aa15.87■□□□□ 0.13
RET-201ENST00000340058 EPHA7Q15375 998 aa15.87■□□□□ 0.13
RET-201ENST00000340058 HP1BP3Q5SSJ5 553 aaPredicted RBP15.87■□□□□ 0.13
RET-201ENST00000340058 GIMAP7Q8NHV1 300 aa15.87■□□□□ 0.13
RET-201ENST00000340058 SLC30A5Q8TAD4 765 aa15.87■□□□□ 0.13
RET-201ENST00000340058 MYOZ2Q9NPC6 264 aa15.87■□□□□ 0.13
RET-201ENST00000340058 NUB1Q9Y5A7 615 aa15.87■□□□□ 0.13
RET-201ENST00000340058 PDS5AQ29RF7 1337 aaKnown RBP15.86■□□□□ 0.13
RET-201ENST00000340058 MSH4O15457 936 aa15.86■□□□□ 0.13
RET-201ENST00000340058 TADA3O75528 432 aa15.86■□□□□ 0.13
RET-201ENST00000340058 P4HA1P13674 534 aa15.86■□□□□ 0.13
RET-201ENST00000340058 ATF2P15336 505 aa15.86■□□□□ 0.13
RET-201ENST00000340058 PSMC6P62333 389 aa15.86■□□□□ 0.13
RET-201ENST00000340058 TAAR1Q96RJ0 339 aa15.86■□□□□ 0.13
RET-201ENST00000340058 INTS2Q9H0H0 1204 aaKnown RBP15.86■□□□□ 0.13
RET-201ENST00000340058 PCDHA10Q9Y5I2 948 aa15.86■□□□□ 0.13
RET-201ENST00000340058 LIG3P49916 1009 aa15.86■□□□□ 0.13
RET-201ENST00000340058 PSMC5P62195 406 aa15.86■□□□□ 0.13
RET-201ENST00000340058 CCNA1P78396 465 aa15.86■□□□□ 0.13
RET-201ENST00000340058 KRT76Q01546 638 aa15.86■□□□□ 0.13
RET-201ENST00000340058 HHATQ5VTY9 493 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms