RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 EXOC4Q96A65 974 aa17.88■□□□□ 0.45
LITAF-201ENST00000339430 CLMNQ96JQ2 1002 aa17.88■□□□□ 0.45
LITAF-201ENST00000339430 FAM20AQ96MK3 541 aa17.88■□□□□ 0.45
LITAF-201ENST00000339430 IKZF4Q9H2S9 585 aa17.88■□□□□ 0.45
LITAF-201ENST00000339430 ACBD3Q9H3P7 528 aa17.88■□□□□ 0.45
LITAF-201ENST00000339430 RPAP3Q9H6T3 665 aaPredicted RBP17.88■□□□□ 0.45
LITAF-201ENST00000339430 ARMCX3Q9UH62 379 aaPredicted RBP17.88■□□□□ 0.45
LITAF-201ENST00000339430 DMGDHQ9UI17 866 aaKnown RBP17.88■□□□□ 0.45
LITAF-201ENST00000339430 OTOFQ9HC10 1997 aa17.88■□□□□ 0.45
LITAF-201ENST00000339430 RBAK-RBAKDNI3L0D1 243 aa17.88■□□□□ 0.45
LITAF-201ENST00000339430 CLIC2O15247 247 aa17.88■□□□□ 0.45
LITAF-201ENST00000339430 SLC26A4O43511 780 aa17.88■□□□□ 0.45
LITAF-201ENST00000339430 GCNT3O95395 438 aa17.88■□□□□ 0.45
LITAF-201ENST00000339430 ASIC2Q16515 512 aa17.88■□□□□ 0.45
LITAF-201ENST00000339430 TCERG1LQ5VWI1 586 aa17.88■□□□□ 0.45
LITAF-201ENST00000339430 ZNF526Q8TF50 670 aaPredicted RBP17.88■□□□□ 0.45
LITAF-201ENST00000339430 RIN2Q8WYP3 895 aaPredicted RBP17.88■□□□□ 0.45
LITAF-201ENST00000339430 SYN2Q92777 582 aaPredicted RBP17.88■□□□□ 0.45
LITAF-201ENST00000339430 SELENOOQ9BVL4 669 aa17.88■□□□□ 0.45
LITAF-201ENST00000339430 ELP3Q9H9T3 547 aa17.88■□□□□ 0.45
LITAF-201ENST00000339430 HPCAL4Q9UM19 191 aa17.88■□□□□ 0.45
LITAF-201ENST00000339430 A0A0U1RQG5 324 aaPredicted RBP17.87■□□□□ 0.45
LITAF-201ENST00000339430 PALMO75781 387 aa17.87■□□□□ 0.45
LITAF-201ENST00000339430 FLOT1O75955 427 aa17.87■□□□□ 0.45
LITAF-201ENST00000339430 FTCDO95954 541 aa17.87■□□□□ 0.45
LITAF-201ENST00000339430 PRLRP16471 622 aa17.87■□□□□ 0.45
LITAF-201ENST00000339430 KLRC1P26715 233 aa17.87■□□□□ 0.45
LITAF-201ENST00000339430 CASP4P49662 377 aa17.87■□□□□ 0.45
LITAF-201ENST00000339430 CCDC70Q6NSX1 233 aa17.87■□□□□ 0.45
LITAF-201ENST00000339430 EPM2AIP1Q7L775 607 aaPredicted RBP17.87■□□□□ 0.45
LITAF-201ENST00000339430 DNAAF5Q86Y56 855 aa17.87■□□□□ 0.45
LITAF-201ENST00000339430 MMGT1Q8N4V1 131 aa17.87■□□□□ 0.45
LITAF-201ENST00000339430 PRPF38AQ8NAV1 312 aaKnown RBP17.87■□□□□ 0.45
LITAF-201ENST00000339430 FAM71BQ8TC56 605 aa17.87■□□□□ 0.45
LITAF-201ENST00000339430 RANBP17Q9H2T7 1088 aaKnown RBP17.87■□□□□ 0.45
LITAF-201ENST00000339430 RABGAP1Q9Y3P9 1069 aa17.87■□□□□ 0.45
LITAF-201ENST00000339430 C19orf81C9J6K1 198 aa17.87■□□□□ 0.45
LITAF-201ENST00000339430 ZBTB39O15060 712 aa17.87■□□□□ 0.45
LITAF-201ENST00000339430 AKAP3O75969 853 aa17.87■□□□□ 0.45
LITAF-201ENST00000339430 SLC18A3Q16572 532 aa17.87■□□□□ 0.45
LITAF-201ENST00000339430 MCTP2Q6DN12 878 aa17.87■□□□□ 0.45
LITAF-201ENST00000339430 ANKRD13AQ8IZ07 590 aa17.87■□□□□ 0.45
LITAF-201ENST00000339430 ZNF408Q9H9D4 720 aa17.87■□□□□ 0.45
LITAF-201ENST00000339430 PACSIN2Q9UNF0 486 aaPredicted RBP17.87■□□□□ 0.45
LITAF-201ENST00000339430 TRAF3IP3Q9Y228 551 aa17.87■□□□□ 0.45
LITAF-201ENST00000339430 PAPPA2Q9BXP8 1791 aa17.87■□□□□ 0.45
LITAF-201ENST00000339430 TBCAO75347 108 aaKnown RBP17.86■□□□□ 0.45
LITAF-201ENST00000339430 AFPP02771 609 aaKnown RBP17.86■□□□□ 0.45
LITAF-201ENST00000339430 CIITAP33076 1130 aa17.86■□□□□ 0.45
LITAF-201ENST00000339430 KIAA0753Q2KHM9 967 aa17.86■□□□□ 0.45
LITAF-201ENST00000339430 TPH2Q8IWU9 490 aa17.86■□□□□ 0.45
LITAF-201ENST00000339430 NMRK2Q9NPI5 230 aa17.86■□□□□ 0.45
LITAF-201ENST00000339430 IGLV3-22A0A075B6J6 115 aa17.86■□□□□ 0.45
LITAF-201ENST00000339430 CALUO43852 315 aaPredicted RBP17.86■□□□□ 0.45
LITAF-201ENST00000339430 SYF2O95926 243 aaKnown RBP17.86■□□□□ 0.45
LITAF-201ENST00000339430 XRCC5P13010 732 aaKnown RBP17.86■□□□□ 0.45
LITAF-201ENST00000339430 PAFAH1B1P43034 410 aa17.86■□□□□ 0.45
LITAF-201ENST00000339430 FRMD5Q7Z6J6 570 aa17.86■□□□□ 0.45
LITAF-201ENST00000339430 RNF10Q8N5U6 811 aaKnown RBP17.86■□□□□ 0.45
LITAF-201ENST00000339430 ASTN1O14525 1302 aa17.85■□□□□ 0.45
LITAF-201ENST00000339430 RNF40O75150 1001 aa17.85■□□□□ 0.45
LITAF-201ENST00000339430 NR3C1P04150 777 aa17.85■□□□□ 0.45
LITAF-201ENST00000339430 ZNF572Q7Z3I7 529 aaPredicted RBP17.85■□□□□ 0.45
LITAF-201ENST00000339430 OTUD5Q96G74 571 aa17.85■□□□□ 0.45
LITAF-201ENST00000339430 DYDC2Q96IM9 177 aa17.85■□□□□ 0.45
LITAF-201ENST00000339430 SPAG5Q96R06 1193 aa17.85■□□□□ 0.45
LITAF-201ENST00000339430 PLEKHA4Q9H4M7 779 aa17.85■□□□□ 0.45
LITAF-201ENST00000339430 VIPAS39Q9H9C1 493 aa17.85■□□□□ 0.45
LITAF-201ENST00000339430 RBM12Q9NTZ6 932 aaKnown RBP17.85■□□□□ 0.45
LITAF-201ENST00000339430 AIPL1Q9NZN9 384 aa17.85■□□□□ 0.45
LITAF-201ENST00000339430 TMOD4Q9NZQ9 345 aa17.85■□□□□ 0.45
LITAF-201ENST00000339430 PCDHB13Q9Y5F0 798 aa17.85■□□□□ 0.45
LITAF-201ENST00000339430 PDXKO00764 312 aa17.84■□□□□ 0.45
LITAF-201ENST00000339430 EYA4O95677 639 aa17.84■□□□□ 0.45
LITAF-201ENST00000339430 PTK2Q05397 1052 aa17.84■□□□□ 0.45
LITAF-201ENST00000339430 NAB2Q15742 525 aa17.84■□□□□ 0.45
LITAF-201ENST00000339430 ARMC9Q7Z3E5 817 aa17.84■□□□□ 0.45
LITAF-201ENST00000339430 KSR1Q8IVT5 923 aa17.84■□□□□ 0.45
LITAF-201ENST00000339430 C12orf42Q96LP6 360 aa17.84■□□□□ 0.45
LITAF-201ENST00000339430 FAM204AQ9H8W3 233 aa17.84■□□□□ 0.45
LITAF-201ENST00000339430 MED4Q9NPJ6 270 aa17.84■□□□□ 0.45
LITAF-201ENST00000339430 LUC7LQ9NQ29 371 aaKnown RBP17.84■□□□□ 0.45
LITAF-201ENST00000339430 CALCOCO1Q9P1Z2 691 aa17.84■□□□□ 0.45
LITAF-201ENST00000339430 UCHL3P15374 230 aa17.84■□□□□ 0.45
LITAF-201ENST00000339430 PON1P27169 355 aa17.84■□□□□ 0.45
LITAF-201ENST00000339430 NMT1P30419 496 aaKnown RBP17.84■□□□□ 0.45
LITAF-201ENST00000339430 RNASE9P60153 205 aaKnown RBP17.84■□□□□ 0.45
LITAF-201ENST00000339430 EXOC3L4Q17RC7 722 aa17.84■□□□□ 0.45
LITAF-201ENST00000339430 LRCH2Q5VUJ6 765 aa17.84■□□□□ 0.45
LITAF-201ENST00000339430 RINT1Q6NUQ1 792 aa17.84■□□□□ 0.45
LITAF-201ENST00000339430 POLR3CQ9BUI4 534 aaPredicted RBP17.84■□□□□ 0.45
LITAF-201ENST00000339430 TYW1Q9NV66 732 aaKnown RBP17.84■□□□□ 0.45
LITAF-201ENST00000339430 PPP1R9AQ9ULJ8 1098 aa17.84■□□□□ 0.45
LITAF-201ENST00000339430 IRF6O14896 467 aa17.83■□□□□ 0.45
LITAF-201ENST00000339430 CYP3A4P08684 503 aa17.83■□□□□ 0.45
LITAF-201ENST00000339430 GGCXP38435 758 aa17.83■□□□□ 0.45
LITAF-201ENST00000339430 ZC2HC1CQ53FD0 456 aaPredicted RBP17.83■□□□□ 0.45
LITAF-201ENST00000339430 DPY19L2P1Q6NXN4 242 aa17.83■□□□□ 0.45
LITAF-201ENST00000339430 GJB7Q6PEY0 223 aa17.83■□□□□ 0.45
LITAF-201ENST00000339430 ZNF571Q7Z3V5 609 aaPredicted RBP17.83■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms