RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 EIF4A3P38919 411 aaKnown RBP8.13□□□□□ -1.11
SRFBP1-201ENST00000339397 MARSP56192 900 aaKnown RBP8.13□□□□□ -1.11
SRFBP1-201ENST00000339397 ERCC6LQ2NKX8 1250 aa8.13□□□□□ -1.11
SRFBP1-201ENST00000339397 ARHGAP29Q52LW3 1261 aa8.13□□□□□ -1.11
SRFBP1-201ENST00000339397 FAM102BQ5T8I3 360 aa8.13□□□□□ -1.11
SRFBP1-201ENST00000339397 ERO1BQ86YB8 467 aa8.13□□□□□ -1.11
SRFBP1-201ENST00000339397 ANKRD13AQ8IZ07 590 aa8.13□□□□□ -1.11
SRFBP1-201ENST00000339397 SLC35F6Q8N357 371 aa8.13□□□□□ -1.11
SRFBP1-201ENST00000339397 SLC35C1Q96A29 364 aa8.13□□□□□ -1.11
SRFBP1-201ENST00000339397 ELMO3Q96BJ8 720 aa8.13□□□□□ -1.11
SRFBP1-201ENST00000339397 CBWD1Q9BRT8 395 aa8.13□□□□□ -1.11
SRFBP1-201ENST00000339397 NUP58Q9BVL2 599 aa8.13□□□□□ -1.11
SRFBP1-201ENST00000339397 STRA6Q9BX79 667 aa8.13□□□□□ -1.11
SRFBP1-201ENST00000339397 TAF1DQ9H5J8 278 aaPredicted RBP8.13□□□□□ -1.11
SRFBP1-201ENST00000339397 L2HGDHQ9H9P8 463 aa8.13□□□□□ -1.11
SRFBP1-201ENST00000339397 AGPAT3Q9NRZ7 376 aa8.13□□□□□ -1.11
SRFBP1-201ENST00000339397 PCDHA10Q9Y5I2 948 aa8.13□□□□□ -1.11
SRFBP1-201ENST00000339397 PTPRFP10586 1907 aa8.13□□□□□ -1.11
SRFBP1-201ENST00000339397 GLTPD2A6NH11 291 aa8.12□□□□□ -1.11
SRFBP1-201ENST00000339397 ENC1O14682 589 aa8.12□□□□□ -1.11
SRFBP1-201ENST00000339397 GAP43P17677 238 aa8.12□□□□□ -1.11
SRFBP1-201ENST00000339397 CASQ1P31415 396 aa8.12□□□□□ -1.11
SRFBP1-201ENST00000339397 ACTR2P61160 394 aa8.12□□□□□ -1.11
SRFBP1-201ENST00000339397 PSMC5P62195 406 aa8.12□□□□□ -1.11
SRFBP1-201ENST00000339397 DLG4P78352 724 aa8.12□□□□□ -1.11
SRFBP1-201ENST00000339397 IRX3P78415 501 aaPredicted RBP8.12□□□□□ -1.11
SRFBP1-201ENST00000339397 PPATQ06203 517 aa8.12□□□□□ -1.11
SRFBP1-201ENST00000339397 GFPT1Q06210 699 aaPredicted RBP8.12□□□□□ -1.11
SRFBP1-201ENST00000339397 TSR1Q2NL82 804 aaKnown RBP8.12□□□□□ -1.11
SRFBP1-201ENST00000339397 HGSNATQ68CP4 663 aa8.12□□□□□ -1.11
SRFBP1-201ENST00000339397 C4orf19Q8IY42 314 aa8.12□□□□□ -1.11
SRFBP1-201ENST00000339397 ANKRD13CQ8N6S4 541 aa8.12□□□□□ -1.11
SRFBP1-201ENST00000339397 RETREG2Q8NC44 543 aa8.12□□□□□ -1.11
SRFBP1-201ENST00000339397 NEK11Q8NG66 645 aa8.12□□□□□ -1.11
SRFBP1-201ENST00000339397 JPH1Q9HDC5 661 aaPredicted RBP8.12□□□□□ -1.11
SRFBP1-201ENST00000339397 TCEAL9Q9UHQ7 104 aa8.12□□□□□ -1.11
SRFBP1-201ENST00000339397 CLEC11AQ9Y240 323 aa8.12□□□□□ -1.11
SRFBP1-201ENST00000339397 MYH11P35749 1972 aa8.12□□□□□ -1.11
SRFBP1-201ENST00000339397 PFASO15067 1338 aa8.12□□□□□ -1.11
SRFBP1-201ENST00000339397 SPATA31C2B4DYI2 1134 aa8.12□□□□□ -1.11
SRFBP1-201ENST00000339397 CCP110O43303 1012 aa8.12□□□□□ -1.11
SRFBP1-201ENST00000339397 CALUO43852 315 aaPredicted RBP8.12□□□□□ -1.11
SRFBP1-201ENST00000339397 KIF20AO95235 890 aa8.12□□□□□ -1.11
SRFBP1-201ENST00000339397 MYCNP04198 464 aaPredicted RBP8.12□□□□□ -1.11
SRFBP1-201ENST00000339397 XRCC5P13010 732 aaKnown RBP8.12□□□□□ -1.11
SRFBP1-201ENST00000339397 PON1P27169 355 aa8.12□□□□□ -1.11
SRFBP1-201ENST00000339397 HOXA7P31268 230 aaPredicted RBP8.12□□□□□ -1.11
SRFBP1-201ENST00000339397 ELF2Q15723 593 aa8.12□□□□□ -1.11
SRFBP1-201ENST00000339397 LY6KQ17RY6 165 aa8.12□□□□□ -1.11
SRFBP1-201ENST00000339397 CBWD6Q4V339 395 aa8.12□□□□□ -1.11
SRFBP1-201ENST00000339397 FIGNQ5HY92 759 aa8.12□□□□□ -1.11
SRFBP1-201ENST00000339397 CBWD3Q5JTY5 395 aa8.12□□□□□ -1.11
SRFBP1-201ENST00000339397 CBWD5Q5RIA9 395 aa8.12□□□□□ -1.11
SRFBP1-201ENST00000339397 WDR78Q5VTH9 848 aa8.12□□□□□ -1.11
SRFBP1-201ENST00000339397 FOXR2Q6PJQ5 311 aa8.12□□□□□ -1.11
SRFBP1-201ENST00000339397 CACNA2D4Q7Z3S7 1137 aa8.12□□□□□ -1.11
SRFBP1-201ENST00000339397 SYCP3Q8IZU3 236 aa8.12□□□□□ -1.11
SRFBP1-201ENST00000339397 GPRASP2Q96D09 838 aa8.12□□□□□ -1.11
SRFBP1-201ENST00000339397 L3MBTL3Q96JM7 780 aaPredicted RBP8.12□□□□□ -1.11
SRFBP1-201ENST00000339397 CEP170P1Q96L14 293 aa8.12□□□□□ -1.11
SRFBP1-201ENST00000339397 CARD6Q9BX69 1037 aa8.12□□□□□ -1.11
SRFBP1-201ENST00000339397 GBP3Q9H0R5 595 aa8.12□□□□□ -1.11
SRFBP1-201ENST00000339397 HDAC6Q9UBN7 1215 aa8.12□□□□□ -1.11
SRFBP1-201ENST00000339397 SLC9A2Q9UBY0 812 aa8.12□□□□□ -1.11
SRFBP1-201ENST00000339397 ODF2LQ9ULJ1 636 aa8.12□□□□□ -1.11
SRFBP1-201ENST00000339397 PAPPA2Q9BXP8 1791 aa8.12□□□□□ -1.11
SRFBP1-201ENST00000339397 OTOFQ9HC10 1997 aa8.12□□□□□ -1.11
SRFBP1-201ENST00000339397 LCTP09848 1927 aa8.12□□□□□ -1.11
SRFBP1-201ENST00000339397 PHLPP2Q6ZVD8 1323 aa8.12□□□□□ -1.11
SRFBP1-201ENST00000339397 A0A1W2PQJ5 194 aa8.12□□□□□ -1.11
SRFBP1-201ENST00000339397 GOLGA8IPA6NC78 632 aa8.12□□□□□ -1.11
SRFBP1-201ENST00000339397 SPDYE5A6NIY4 337 aa8.12□□□□□ -1.11
SRFBP1-201ENST00000339397 GOLGA8JA6NMD2 632 aa8.12□□□□□ -1.11
SRFBP1-201ENST00000339397 CCDC169A6NNP5 214 aa8.12□□□□□ -1.11
SRFBP1-201ENST00000339397 KIF2AO00139 706 aaPredicted RBP8.12□□□□□ -1.11
SRFBP1-201ENST00000339397 EIF3DO15371 548 aaKnown RBP eCLIP8.12□□□□□ -1.11
SRFBP1-201ENST00000339397 MUTP22033 750 aa8.12□□□□□ -1.11
SRFBP1-201ENST00000339397 ALDH5A1P51649 535 aaPredicted RBP8.12□□□□□ -1.11
SRFBP1-201ENST00000339397 KRT76Q01546 638 aa8.12□□□□□ -1.11
SRFBP1-201ENST00000339397 STXBP2Q15833 593 aa8.12□□□□□ -1.11
SRFBP1-201ENST00000339397 GPAT2Q6NUI2 795 aa8.12□□□□□ -1.11
SRFBP1-201ENST00000339397 ABHD15Q6UXT9 468 aa8.12□□□□□ -1.11
SRFBP1-201ENST00000339397 USP50Q70EL3 339 aaPredicted RBP8.12□□□□□ -1.11
SRFBP1-201ENST00000339397 HAUS6Q7Z4H7 955 aa8.12□□□□□ -1.11
SRFBP1-201ENST00000339397 FRMD5Q7Z6J6 570 aa8.12□□□□□ -1.11
SRFBP1-201ENST00000339397 RIOX2Q8IUF8 465 aa8.12□□□□□ -1.11
SRFBP1-201ENST00000339397 FAM133AQ8N9E0 248 aa8.12□□□□□ -1.11
SRFBP1-201ENST00000339397 ZNF397Q8NF99 534 aaPredicted RBP8.12□□□□□ -1.11
SRFBP1-201ENST00000339397 CCDC42Q96M95 316 aa8.12□□□□□ -1.11
SRFBP1-201ENST00000339397 PORCNQ9H237 461 aa8.12□□□□□ -1.11
SRFBP1-201ENST00000339397 SALL4Q9UJQ4 1053 aa8.12□□□□□ -1.11
SRFBP1-201ENST00000339397 DBR1Q9UK59 544 aaKnown RBP8.12□□□□□ -1.11
SRFBP1-201ENST00000339397 FHOD1Q9Y613 1164 aa8.12□□□□□ -1.11
SRFBP1-201ENST00000339397 WDR90Q96KV7 1748 aa8.11□□□□□ -1.11
SRFBP1-201ENST00000339397 ADGRA3Q8IWK6 1321 aa8.11□□□□□ -1.11
SRFBP1-201ENST00000339397 MACROD2A1Z1Q3 448 aa8.11□□□□□ -1.11
SRFBP1-201ENST00000339397 ANKRD63C9JTQ0 380 aa8.11□□□□□ -1.11
SRFBP1-201ENST00000339397 ARIH2O95376 493 aa8.11□□□□□ -1.11
SRFBP1-201ENST00000339397 SLU7O95391 586 aaKnown RBP8.11□□□□□ -1.11
SRFBP1-201ENST00000339397 GNA14O95837 355 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms