RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 TMEM40Q8WWA1 233 aa17.15■□□□□ 0.34
PRKN-201ENST00000338468 LINC01599Q8WXQ3 324 aa17.15■□□□□ 0.34
PRKN-201ENST00000338468 SQORQ9Y6N5 450 aa17.15■□□□□ 0.34
PRKN-201ENST00000338468 MAGEB2O15479 319 aa17.14■□□□□ 0.33
PRKN-201ENST00000338468 TLL1O43897 1013 aa17.14■□□□□ 0.33
PRKN-201ENST00000338468 GPR32O75388 356 aa17.14■□□□□ 0.33
PRKN-201ENST00000338468 P4HBP07237 508 aaKnown RBP17.14■□□□□ 0.33
PRKN-201ENST00000338468 ATP2B1P20020 1258 aa17.14■□□□□ 0.33
PRKN-201ENST00000338468 U2AF2P26368 475 aaKnown RBP eCLIP17.14■□□□□ 0.33
PRKN-201ENST00000338468 MCM7P33993 719 aa17.14■□□□□ 0.33
PRKN-201ENST00000338468 QARSP47897 775 aaKnown RBP17.14■□□□□ 0.33
PRKN-201ENST00000338468 TAP1Q03518 808 aa17.14■□□□□ 0.33
PRKN-201ENST00000338468 EFCAB12Q6NXP0 572 aa17.14■□□□□ 0.33
PRKN-201ENST00000338468 NOSTRINQ8IVI9 506 aa17.14■□□□□ 0.33
PRKN-201ENST00000338468 MYOCDQ8IZQ8 938 aa17.14■□□□□ 0.33
PRKN-201ENST00000338468 LRRC71Q8N4P6 559 aa17.14■□□□□ 0.33
PRKN-201ENST00000338468 METTL13Q8N6R0 699 aa17.14■□□□□ 0.33
PRKN-201ENST00000338468 SH2D3AQ9BRG2 576 aa17.14■□□□□ 0.33
PRKN-201ENST00000338468 RGL1Q9NZL6 768 aa17.14■□□□□ 0.33
PRKN-201ENST00000338468 SEPT9Q9UHD8 586 aaPredicted RBP17.14■□□□□ 0.33
PRKN-201ENST00000338468 MARCH6O60337 910 aa17.13■□□□□ 0.33
PRKN-201ENST00000338468 BAG4O95429 457 aaKnown RBP17.13■□□□□ 0.33
PRKN-201ENST00000338468 AMHP03971 560 aa17.13■□□□□ 0.33
PRKN-201ENST00000338468 VTNP04004 478 aa17.13■□□□□ 0.33
PRKN-201ENST00000338468 GJB2P29033 226 aa17.13■□□□□ 0.33
PRKN-201ENST00000338468 KCNQ1P51787 676 aa17.13■□□□□ 0.33
PRKN-201ENST00000338468 DRP2Q13474 957 aa17.13■□□□□ 0.33
PRKN-201ENST00000338468 KIZQ2M2Z5 673 aa17.13■□□□□ 0.33
PRKN-201ENST00000338468 TMEM266Q2M3C6 531 aa17.13■□□□□ 0.33
PRKN-201ENST00000338468 NCAPH2Q6IBW4 605 aa17.13■□□□□ 0.33
PRKN-201ENST00000338468 FAM117BQ6P1L5 589 aa17.13■□□□□ 0.33
PRKN-201ENST00000338468 RTN4RL1Q86UN2 441 aaPredicted RBP17.13■□□□□ 0.33
PRKN-201ENST00000338468 ZNF579Q8NAF0 562 aaKnown RBP17.13■□□□□ 0.33
PRKN-201ENST00000338468 TOP1MTQ969P6 601 aa17.13■□□□□ 0.33
PRKN-201ENST00000338468 DYDC2Q96IM9 177 aa17.13■□□□□ 0.33
PRKN-201ENST00000338468 PPP1R16BQ96T49 567 aa17.13■□□□□ 0.33
PRKN-201ENST00000338468 TMX1Q9H3N1 280 aa17.13■□□□□ 0.33
PRKN-201ENST00000338468 PADI3Q9ULW8 664 aa17.13■□□□□ 0.33
PRKN-201ENST00000338468 PCDHA12Q9UN75 941 aa17.13■□□□□ 0.33
PRKN-201ENST00000338468 TCF20Q9UGU0 1960 aaKnown RBP17.13■□□□□ 0.33
PRKN-201ENST00000338468 IGKV6-21A0A0C4DH24 114 aa17.12■□□□□ 0.33
PRKN-201ENST00000338468 DDX11L8A8MPP1 907 aa17.12■□□□□ 0.33
PRKN-201ENST00000338468 M0QZ92 97 aa17.12■□□□□ 0.33
PRKN-201ENST00000338468 ENPP3O14638 875 aa17.12■□□□□ 0.33
PRKN-201ENST00000338468 SLITRK3O94933 977 aa17.12■□□□□ 0.33
PRKN-201ENST00000338468 TXKP42681 527 aa17.12■□□□□ 0.33
PRKN-201ENST00000338468 TOB1P50616 345 aaPredicted RBP17.12■□□□□ 0.33
PRKN-201ENST00000338468 HTRA4P83105 476 aaPredicted RBP17.12■□□□□ 0.33
PRKN-201ENST00000338468 NBR1Q14596 966 aa17.12■□□□□ 0.33
PRKN-201ENST00000338468 ZNF174Q15697 407 aa17.12■□□□□ 0.33
PRKN-201ENST00000338468 MTERF2Q49AM1 385 aa17.12■□□□□ 0.33
PRKN-201ENST00000338468 PLA2G4FQ68DD2 849 aa17.12■□□□□ 0.33
PRKN-201ENST00000338468 RAD9AQ99638 391 aa17.12■□□□□ 0.33
PRKN-201ENST00000338468 HSD17B14Q9BPX1 270 aa17.12■□□□□ 0.33
PRKN-201ENST00000338468 LXNQ9BS40 222 aa17.12■□□□□ 0.33
PRKN-201ENST00000338468 ADAMTS10Q9H324 1103 aa17.12■□□□□ 0.33
PRKN-201ENST00000338468 TTC12Q9H892 705 aaPredicted RBP17.12■□□□□ 0.33
PRKN-201ENST00000338468 ERVK-5Q9HDB9 667 aa17.12■□□□□ 0.33
PRKN-201ENST00000338468 GINS2Q9Y248 185 aa17.12■□□□□ 0.33
PRKN-201ENST00000338468 HCN4Q9Y3Q4 1203 aa17.12■□□□□ 0.33
PRKN-201ENST00000338468 NOC2LQ9Y3T9 749 aaKnown RBP17.12■□□□□ 0.33
PRKN-201ENST00000338468 EPOPA6NHQ4 379 aa17.11■□□□□ 0.33
PRKN-201ENST00000338468 ZBTB39O15060 712 aa17.11■□□□□ 0.33
PRKN-201ENST00000338468 POU3F3P20264 500 aaPredicted RBP17.11■□□□□ 0.33
PRKN-201ENST00000338468 CRYBB1P53674 252 aaPredicted RBP17.11■□□□□ 0.33
PRKN-201ENST00000338468 NPEPPSP55786 919 aa17.11■□□□□ 0.33
PRKN-201ENST00000338468 TBC1D8BQ0IIM8 1120 aa17.11■□□□□ 0.33
PRKN-201ENST00000338468 CUL4AQ13619 759 aa17.11■□□□□ 0.33
PRKN-201ENST00000338468 CTTNQ14247 550 aaKnown RBP17.11■□□□□ 0.33
PRKN-201ENST00000338468 TTC38Q5R3I4 469 aa17.11■□□□□ 0.33
PRKN-201ENST00000338468 C4orf19Q8IY42 314 aa17.11■□□□□ 0.33
PRKN-201ENST00000338468 CRIPAKQ8N1N5 446 aa17.11■□□□□ 0.33
PRKN-201ENST00000338468 C4orf32Q8N8J7 132 aa17.11■□□□□ 0.33
PRKN-201ENST00000338468 OSMRQ99650 979 aa17.11■□□□□ 0.33
PRKN-201ENST00000338468 EIF2AK1Q9BQI3 630 aaKnown RBP17.11■□□□□ 0.33
PRKN-201ENST00000338468 ZBED2Q9BTP6 218 aa17.11■□□□□ 0.33
PRKN-201ENST00000338468 SUGCTQ9HAC7 445 aa17.11■□□□□ 0.33
PRKN-201ENST00000338468 COG5Q9UP83 839 aa17.11■□□□□ 0.33
PRKN-201ENST00000338468 MTCH2Q9Y6C9 303 aa17.11■□□□□ 0.33
PRKN-201ENST00000338468 COL4A6Q14031 1691 aa17.1■□□□□ 0.33
PRKN-201ENST00000338468 MAFO75444 373 aaPredicted RBP17.1■□□□□ 0.33
PRKN-201ENST00000338468 TRAPPC10P48553 1259 aa17.1■□□□□ 0.33
PRKN-201ENST00000338468 NLRP11P59045 1033 aaKnown RBP17.1■□□□□ 0.33
PRKN-201ENST00000338468 CYP4A11Q02928 519 aa17.1■□□□□ 0.33
PRKN-201ENST00000338468 PAK2Q13177 524 aa17.1■□□□□ 0.33
PRKN-201ENST00000338468 ORC2Q13416 577 aaPredicted RBP17.1■□□□□ 0.33
PRKN-201ENST00000338468 FAM228AQ86W67 206 aa17.1■□□□□ 0.33
PRKN-201ENST00000338468 SP7Q8TDD2 431 aaPredicted RBP17.1■□□□□ 0.33
PRKN-201ENST00000338468 CERS4Q9HA82 394 aa17.1■□□□□ 0.33
PRKN-201ENST00000338468 CYP26B1Q9NR63 512 aa17.1■□□□□ 0.33
PRKN-201ENST00000338468 AKT3Q9Y243 479 aa17.1■□□□□ 0.33
PRKN-201ENST00000338468 ARIH1Q9Y4X5 557 aaPredicted RBP17.1■□□□□ 0.33
PRKN-201ENST00000338468 PRRC2BQ5JSZ5 2229 aaKnown RBP17.1■□□□□ 0.33
PRKN-201ENST00000338468 TTC3P53804 2025 aa17.09■□□□□ 0.33
PRKN-201ENST00000338468 LINC01553A4QN01 128 aa17.09■□□□□ 0.33
PRKN-201ENST00000338468 POTEMA6NI47 508 aa17.09■□□□□ 0.33
PRKN-201ENST00000338468 RFXAPO00287 272 aa17.09■□□□□ 0.33
PRKN-201ENST00000338468 MGEA5O60502 916 aa17.09■□□□□ 0.33
PRKN-201ENST00000338468 RPS6KA5O75582 802 aa17.09■□□□□ 0.33
PRKN-201ENST00000338468 UPP2O95045 317 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms