RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 DKC1O60832 514 aaKnown RBP eCLIP14.24□□□□□ -0.13
COL2A1-201ENST00000337299 ATP5HO75947 161 aa14.24□□□□□ -0.13
COL2A1-201ENST00000337299 AGTP01019 485 aa14.24□□□□□ -0.13
COL2A1-201ENST00000337299 HARSP12081 509 aaKnown RBP14.24□□□□□ -0.13
COL2A1-201ENST00000337299 PLS3P13797 630 aa14.24□□□□□ -0.13
COL2A1-201ENST00000337299 ZNF844Q08AG5 666 aa14.24□□□□□ -0.13
COL2A1-201ENST00000337299 KIAA1755Q5JYT7 1200 aa14.24□□□□□ -0.13
COL2A1-201ENST00000337299 C10orf76Q5T2E6 689 aa14.24□□□□□ -0.13
COL2A1-201ENST00000337299 DCUN1D2Q6PH85 259 aa14.24□□□□□ -0.13
COL2A1-201ENST00000337299 SLF2Q8IX21 1173 aa14.24□□□□□ -0.13
COL2A1-201ENST00000337299 C1orf54Q8WWF1 131 aa14.24□□□□□ -0.13
COL2A1-201ENST00000337299 C9orf72Q96LT7 481 aa14.24□□□□□ -0.13
COL2A1-201ENST00000337299 A0A087X0B3 334 aa14.24□□□□□ -0.13
COL2A1-201ENST00000337299 TRAPPC3O43617 180 aa14.24□□□□□ -0.13
COL2A1-201ENST00000337299 PSEN1P49768 467 aa14.24□□□□□ -0.13
COL2A1-201ENST00000337299 ERVK-9P63128 1117 aa14.24□□□□□ -0.13
COL2A1-201ENST00000337299 DDR1Q08345 913 aa14.24□□□□□ -0.13
COL2A1-201ENST00000337299 GRK7Q8WTQ7 553 aa14.24□□□□□ -0.13
COL2A1-201ENST00000337299 TLR10Q9BXR5 811 aa14.24□□□□□ -0.13
COL2A1-201ENST00000337299 IFT122Q9HBG6 1241 aa14.24□□□□□ -0.13
COL2A1-201ENST00000337299 SAYSD1Q9NPB0 183 aa14.24□□□□□ -0.13
COL2A1-201ENST00000337299 NEXMIFQ5QGS0 1516 aa14.23□□□□□ -0.13
COL2A1-201ENST00000337299 RFC5P40937 340 aa14.23□□□□□ -0.13
COL2A1-201ENST00000337299 CPA2P48052 419 aa14.23□□□□□ -0.13
COL2A1-201ENST00000337299 PRR16Q569H4 304 aa14.23□□□□□ -0.13
COL2A1-201ENST00000337299 BARGINQ6ZT62 677 aa14.23□□□□□ -0.13
COL2A1-201ENST00000337299 METTL13Q8N6R0 699 aa14.23□□□□□ -0.13
COL2A1-201ENST00000337299 COA7Q96BR5 231 aa14.23□□□□□ -0.13
COL2A1-201ENST00000337299 FAM129AQ9BZQ8 928 aa14.23□□□□□ -0.13
COL2A1-201ENST00000337299 TSPYL2Q9H2G4 693 aaPredicted RBP14.23□□□□□ -0.13
COL2A1-201ENST00000337299 DDX25Q9UHL0 483 aaKnown RBP14.23□□□□□ -0.13
COL2A1-201ENST00000337299 PODXLO00592 558 aa14.23□□□□□ -0.13
COL2A1-201ENST00000337299 TPD52P55327 224 aaPredicted RBP14.23□□□□□ -0.13
COL2A1-201ENST00000337299 BTKQ06187 659 aa14.23□□□□□ -0.13
COL2A1-201ENST00000337299 RBM26Q5T8P6 1007 aaKnown RBP14.23□□□□□ -0.13
COL2A1-201ENST00000337299 RGS9BPQ6ZS82 235 aa14.23□□□□□ -0.13
COL2A1-201ENST00000337299 C4orf33Q8N1A6 199 aa14.23□□□□□ -0.13
COL2A1-201ENST00000337299 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.23□□□□□ -0.13
COL2A1-201ENST00000337299 NPHS2Q9NP85 383 aa14.23□□□□□ -0.13
COL2A1-201ENST00000337299 CHCHD3Q9NX63 227 aaKnown RBP14.23□□□□□ -0.13
COL2A1-201ENST00000337299 SFI1A8K8P3 1242 aa14.23□□□□□ -0.13
COL2A1-201ENST00000337299 ITGA4P13612 1032 aa14.23□□□□□ -0.13
COL2A1-201ENST00000337299 YWHAGP61981 247 aaKnown RBP eCLIP14.23□□□□□ -0.13
COL2A1-201ENST00000337299 USH1GQ495M9 461 aa14.23□□□□□ -0.13
COL2A1-201ENST00000337299 BSPRYQ5W0U4 402 aa14.23□□□□□ -0.13
COL2A1-201ENST00000337299 UNC13DQ70J99 1090 aa14.23□□□□□ -0.13
COL2A1-201ENST00000337299 ZNF804AQ7Z570 1209 aa14.23□□□□□ -0.13
COL2A1-201ENST00000337299 NLRP10Q86W26 655 aa14.23□□□□□ -0.13
COL2A1-201ENST00000337299 FAM186BQ8IYM0 893 aa14.23□□□□□ -0.13
COL2A1-201ENST00000337299 TEX9Q8N6V9 391 aa14.23□□□□□ -0.13
COL2A1-201ENST00000337299 METTL14Q9HCE5 456 aaKnown RBP14.23□□□□□ -0.13
COL2A1-201ENST00000337299 NDE1Q9NXR1 346 aa14.23□□□□□ -0.13
COL2A1-201ENST00000337299 CHORDC1Q9UHD1 332 aaPredicted RBP14.23□□□□□ -0.13
COL2A1-201ENST00000337299 CHMP2BQ9UQN3 213 aa14.23□□□□□ -0.13
COL2A1-201ENST00000337299 GOLGA8RI6L899 631 aa14.22□□□□□ -0.13
COL2A1-201ENST00000337299 KITP10721 976 aa14.22□□□□□ -0.13
COL2A1-201ENST00000337299 RNASELQ05823 741 aaKnown RBP14.22□□□□□ -0.13
COL2A1-201ENST00000337299 PPP2R5DQ14738 602 aa14.22□□□□□ -0.13
COL2A1-201ENST00000337299 RCN1Q15293 331 aa14.22□□□□□ -0.13
COL2A1-201ENST00000337299 SPICE1Q8N0Z3 855 aa14.22□□□□□ -0.13
COL2A1-201ENST00000337299 LRRC47Q8N1G4 583 aaKnown RBP14.22□□□□□ -0.13
COL2A1-201ENST00000337299 NME8Q8N427 588 aa14.22□□□□□ -0.13
COL2A1-201ENST00000337299 MSL3Q8N5Y2 521 aaKnown RBP14.22□□□□□ -0.13
COL2A1-201ENST00000337299 TSNARE1Q96NA8 513 aa14.22□□□□□ -0.13
COL2A1-201ENST00000337299 TRIM55Q9BYV6 548 aa14.22□□□□□ -0.13
COL2A1-201ENST00000337299 Q9H521 79 aa14.22□□□□□ -0.13
COL2A1-201ENST00000337299 HEG1Q9ULI3 1381 aa14.22□□□□□ -0.13
COL2A1-201ENST00000337299 GOLGA8SH3BPF8 625 aa14.22□□□□□ -0.13
COL2A1-201ENST00000337299 GOLGA8MH3BSY2 632 aa14.22□□□□□ -0.13
COL2A1-201ENST00000337299 SP4Q02446 784 aa14.22□□□□□ -0.13
COL2A1-201ENST00000337299 KYNUQ16719 465 aa14.22□□□□□ -0.13
COL2A1-201ENST00000337299 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.22□□□□□ -0.13
COL2A1-201ENST00000337299 SMC1BQ8NDV3 1235 aa14.22□□□□□ -0.13
COL2A1-201ENST00000337299 UBN1Q9NPG3 1134 aa14.22□□□□□ -0.13
COL2A1-201ENST00000337299 ANKARQ7Z5J8 1434 aa14.22□□□□□ -0.13
COL2A1-201ENST00000337299 NBPF26B4DH59 902 aa14.22□□□□□ -0.13
COL2A1-201ENST00000337299 H7C1W4 665 aa14.22□□□□□ -0.13
COL2A1-201ENST00000337299 DNM1LO00429 736 aa14.22□□□□□ -0.13
COL2A1-201ENST00000337299 KCNQ2O43526 872 aa14.22□□□□□ -0.13
COL2A1-201ENST00000337299 SARSP49591 514 aaKnown RBP14.22□□□□□ -0.13
COL2A1-201ENST00000337299 IFI35P80217 286 aaPredicted RBP14.22□□□□□ -0.13
COL2A1-201ENST00000337299 CASC4Q6P4E1 433 aa14.22□□□□□ -0.13
COL2A1-201ENST00000337299 USP17L2Q6R6M4 530 aa14.22□□□□□ -0.13
COL2A1-201ENST00000337299 NBPF15Q8N660 670 aa14.22□□□□□ -0.13
COL2A1-201ENST00000337299 TMEM60Q9H2L4 133 aa14.22□□□□□ -0.13
COL2A1-201ENST00000337299 REXO2Q9Y3B8 237 aaKnown RBP14.22□□□□□ -0.13
COL2A1-201ENST00000337299 C2CD2Q9Y426 696 aa14.22□□□□□ -0.13
COL2A1-201ENST00000337299 SPECC1L-ADORA2AF8WAN1 911 aa14.21□□□□□ -0.13
COL2A1-201ENST00000337299 DNAJC8O75937 253 aaPredicted RBP14.21□□□□□ -0.13
COL2A1-201ENST00000337299 GSCP56915 257 aaPredicted RBP14.21□□□□□ -0.13
COL2A1-201ENST00000337299 ITIH3Q06033 890 aa14.21□□□□□ -0.13
COL2A1-201ENST00000337299 MTM1Q13496 603 aa14.21□□□□□ -0.13
COL2A1-201ENST00000337299 RASSF3Q86WH2 238 aa14.21□□□□□ -0.13
COL2A1-201ENST00000337299 TMEM237Q96Q45 408 aa14.21□□□□□ -0.13
COL2A1-201ENST00000337299 HSD3B7Q9H2F3 369 aa14.21□□□□□ -0.13
COL2A1-201ENST00000337299 PTPRUQ92729 1446 aa14.21□□□□□ -0.13
COL2A1-201ENST00000337299 USP17L3A6NCW0 530 aa14.21□□□□□ -0.13
COL2A1-201ENST00000337299 USP17L4A6NCW7 530 aa14.21□□□□□ -0.13
COL2A1-201ENST00000337299 USP17L1Q7RTZ2 530 aa14.21□□□□□ -0.13
COL2A1-201ENST00000337299 YTHDF3Q7Z739 585 aaKnown RBP14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms