RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 DBNDD1Q9H9R9 158 aa17.96■□□□□ 0.47
CDC42EP4-201ENST00000335793 PCDHGC5Q9Y5F6 944 aa17.96■□□□□ 0.47
CDC42EP4-201ENST00000335793 COL16A1Q07092 1604 aaPredicted RBP17.96■□□□□ 0.47
CDC42EP4-201ENST00000335793 TLDC2A0PJX2 215 aa17.96■□□□□ 0.46
CDC42EP4-201ENST00000335793 BACH1O14867 736 aa17.96■□□□□ 0.46
CDC42EP4-201ENST00000335793 DAPK3O43293 454 aa17.96■□□□□ 0.46
CDC42EP4-201ENST00000335793 C21orf2O43822 256 aa17.96■□□□□ 0.46
CDC42EP4-201ENST00000335793 SHOX2O60902 331 aaPredicted RBP17.96■□□□□ 0.46
CDC42EP4-201ENST00000335793 CFBP00751 764 aa17.96■□□□□ 0.46
CDC42EP4-201ENST00000335793 LSP1P33241 339 aa17.96■□□□□ 0.46
CDC42EP4-201ENST00000335793 GIT2Q14161 759 aa17.96■□□□□ 0.46
CDC42EP4-201ENST00000335793 FBXO11Q86XK2 927 aa17.96■□□□□ 0.46
CDC42EP4-201ENST00000335793 SYCP3Q8IZU3 236 aa17.96■□□□□ 0.46
CDC42EP4-201ENST00000335793 LRRC45Q96CN5 670 aa17.96■□□□□ 0.46
CDC42EP4-201ENST00000335793 INPP4AQ96PE3 977 aaPredicted RBP17.96■□□□□ 0.46
CDC42EP4-201ENST00000335793 SH3GL2Q99962 352 aa17.96■□□□□ 0.46
CDC42EP4-201ENST00000335793 AMNQ9BXJ7 453 aa17.96■□□□□ 0.46
CDC42EP4-201ENST00000335793 PICK1Q9NRD5 415 aa17.96■□□□□ 0.46
CDC42EP4-201ENST00000335793 DDX20Q9UHI6 824 aaKnown RBP17.96■□□□□ 0.46
CDC42EP4-201ENST00000335793 RABGAP1Q9Y3P9 1069 aa17.96■□□□□ 0.46
CDC42EP4-201ENST00000335793 NOC2LQ9Y3T9 749 aaKnown RBP17.96■□□□□ 0.46
CDC42EP4-201ENST00000335793 BZW2Q9Y6E2 419 aaKnown RBP17.96■□□□□ 0.46
CDC42EP4-201ENST00000335793 GAKO14976 1311 aa17.95■□□□□ 0.46
CDC42EP4-201ENST00000335793 TMEM110-MUSTN1A8MSY1 372 aa17.95■□□□□ 0.46
CDC42EP4-201ENST00000335793 USP11P51784 963 aa17.95■□□□□ 0.46
CDC42EP4-201ENST00000335793 ICA1Q05084 483 aa17.95■□□□□ 0.46
CDC42EP4-201ENST00000335793 PPP4R3CPQ6ZMV5 832 aa17.95■□□□□ 0.46
CDC42EP4-201ENST00000335793 ZNF572Q7Z3I7 529 aaPredicted RBP17.95■□□□□ 0.46
CDC42EP4-201ENST00000335793 IQCKQ8N0W5 287 aa17.95■□□□□ 0.46
CDC42EP4-201ENST00000335793 METTL13Q8N6R0 699 aa17.95■□□□□ 0.46
CDC42EP4-201ENST00000335793 ARMC2Q8NEN0 867 aa17.95■□□□□ 0.46
CDC42EP4-201ENST00000335793 GLT8D2Q9H1C3 349 aa17.95■□□□□ 0.46
CDC42EP4-201ENST00000335793 SCN7AQ01118 1682 aa17.95■□□□□ 0.46
CDC42EP4-201ENST00000335793 RBAK-RBAKDNI3L0D1 243 aa17.95■□□□□ 0.46
CDC42EP4-201ENST00000335793 KIF3CO14782 793 aa17.95■□□□□ 0.46
CDC42EP4-201ENST00000335793 PPEF1O14829 653 aaPredicted RBP17.95■□□□□ 0.46
CDC42EP4-201ENST00000335793 SNHG28P0DPA3 235 aa17.95■□□□□ 0.46
CDC42EP4-201ENST00000335793 GABPAQ06546 454 aa17.95■□□□□ 0.46
CDC42EP4-201ENST00000335793 IFT88Q13099 833 aa17.95■□□□□ 0.46
CDC42EP4-201ENST00000335793 EDRF1Q3B7T1 1238 aa17.95■□□□□ 0.46
CDC42EP4-201ENST00000335793 GLYCTKQ8IVS8 523 aa17.95■□□□□ 0.46
CDC42EP4-201ENST00000335793 ATP6V1G3Q96LB4 118 aa17.95■□□□□ 0.46
CDC42EP4-201ENST00000335793 CELF4Q9BZC1 486 aaKnown RBP17.95■□□□□ 0.46
CDC42EP4-201ENST00000335793 GANQ9H2C0 597 aa17.95■□□□□ 0.46
CDC42EP4-201ENST00000335793 ITGA4P13612 1032 aa17.94■□□□□ 0.46
CDC42EP4-201ENST00000335793 NMT1P30419 496 aaKnown RBP17.94■□□□□ 0.46
CDC42EP4-201ENST00000335793 ERVK-9P63128 1117 aa17.94■□□□□ 0.46
CDC42EP4-201ENST00000335793 KRT71Q3SY84 523 aa17.94■□□□□ 0.46
CDC42EP4-201ENST00000335793 CERS5Q8N5B7 392 aa17.94■□□□□ 0.46
CDC42EP4-201ENST00000335793 CCDC26Q8TAB7 109 aa17.94■□□□□ 0.46
CDC42EP4-201ENST00000335793 PBKQ96KB5 322 aa17.94■□□□□ 0.46
CDC42EP4-201ENST00000335793 PKD2L1Q9P0L9 805 aa17.94■□□□□ 0.46
CDC42EP4-201ENST00000335793 AMFRQ9UKV5 643 aa17.94■□□□□ 0.46
CDC42EP4-201ENST00000335793 LRRN2O75325 713 aa17.94■□□□□ 0.46
CDC42EP4-201ENST00000335793 KRT13P13646 458 aa17.94■□□□□ 0.46
CDC42EP4-201ENST00000335793 C11orf91Q3C1V1 193 aa17.94■□□□□ 0.46
CDC42EP4-201ENST00000335793 ZC2HC1CQ53FD0 456 aaPredicted RBP17.94■□□□□ 0.46
CDC42EP4-201ENST00000335793 MICALCLQ6ZW33 695 aa17.94■□□□□ 0.46
CDC42EP4-201ENST00000335793 IRF2BP2Q7Z5L9 587 aa17.94■□□□□ 0.46
CDC42EP4-201ENST00000335793 CTNNBL1Q8WYA6 563 aaPredicted RBP17.94■□□□□ 0.46
CDC42EP4-201ENST00000335793 UTRNP46939 3433 aa17.94■□□□□ 0.46
CDC42EP4-201ENST00000335793 A6NNZ2 444 aa17.94■□□□□ 0.46
CDC42EP4-201ENST00000335793 SLC12A3P55017 1021 aa17.94■□□□□ 0.46
CDC42EP4-201ENST00000335793 TUBB8Q3ZCM7 444 aa17.94■□□□□ 0.46
CDC42EP4-201ENST00000335793 FRMD5Q7Z6J6 570 aa17.94■□□□□ 0.46
CDC42EP4-201ENST00000335793 FAM186BQ8IYM0 893 aa17.94■□□□□ 0.46
CDC42EP4-201ENST00000335793 ARFGAP2Q8N6H7 521 aa17.94■□□□□ 0.46
CDC42EP4-201ENST00000335793 ETAA1Q9NY74 926 aa17.94■□□□□ 0.46
CDC42EP4-201ENST00000335793 F5H6K3 240 aa17.93■□□□□ 0.46
CDC42EP4-201ENST00000335793 FGGP02679 453 aa17.93■□□□□ 0.46
CDC42EP4-201ENST00000335793 CLK2P49760 499 aaKnown RBP17.93■□□□□ 0.46
CDC42EP4-201ENST00000335793 KLRC3Q07444 240 aa17.93■□□□□ 0.46
CDC42EP4-201ENST00000335793 HS2ST1Q7LGA3 356 aa17.93■□□□□ 0.46
CDC42EP4-201ENST00000335793 METTL14Q9HCE5 456 aaKnown RBP17.93■□□□□ 0.46
CDC42EP4-201ENST00000335793 UTP11Q9Y3A2 253 aaKnown RBP17.93■□□□□ 0.46
CDC42EP4-201ENST00000335793 PCDHAC2Q9Y5I4 1007 aa17.93■□□□□ 0.46
CDC42EP4-201ENST00000335793 GRIN2DO15399 1336 aa17.93■□□□□ 0.46
CDC42EP4-201ENST00000335793 TTI1O43156 1089 aa17.93■□□□□ 0.46
CDC42EP4-201ENST00000335793 PPP1R37O75864 691 aa17.93■□□□□ 0.46
CDC42EP4-201ENST00000335793 COPB2P35606 906 aa17.93■□□□□ 0.46
CDC42EP4-201ENST00000335793 COA1Q9GZY4 146 aa17.93■□□□□ 0.46
CDC42EP4-201ENST00000335793 FBXL5Q9UKA1 691 aa17.93■□□□□ 0.46
CDC42EP4-201ENST00000335793 NOVA2Q9UNW9 492 aaKnown RBP17.93■□□□□ 0.46
CDC42EP4-201ENST00000335793 ATP8A1Q9Y2Q0 1164 aa17.93■□□□□ 0.46
CDC42EP4-201ENST00000335793 KIAA1551Q9HCM1 1747 aa17.93■□□□□ 0.46
CDC42EP4-201ENST00000335793 HSD17B3P37058 310 aa17.92■□□□□ 0.46
CDC42EP4-201ENST00000335793 DHX9Q08211 1270 aaKnown RBP17.92■□□□□ 0.46
CDC42EP4-201ENST00000335793 ZNF211Q13398 564 aaPredicted RBP17.92■□□□□ 0.46
CDC42EP4-201ENST00000335793 PREPLQ4J6C6 727 aaPredicted RBP17.92■□□□□ 0.46
CDC42EP4-201ENST00000335793 RBM46Q8TBY0 533 aaKnown RBP17.92■□□□□ 0.46
CDC42EP4-201ENST00000335793 CCDC17Q96LX7 622 aa17.92■□□□□ 0.46
CDC42EP4-201ENST00000335793 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.92■□□□□ 0.46
CDC42EP4-201ENST00000335793 RUSC1Q9BVN2 902 aa17.92■□□□□ 0.46
CDC42EP4-201ENST00000335793 OSGEPQ9NPF4 335 aa17.92■□□□□ 0.46
CDC42EP4-201ENST00000335793 PCDHA2Q9Y5H9 948 aa17.92■□□□□ 0.46
CDC42EP4-201ENST00000335793 FAM86B1E9PN63 330 aa17.92■□□□□ 0.46
CDC42EP4-201ENST00000335793 FAM86B2P0C5J1 330 aa17.92■□□□□ 0.46
CDC42EP4-201ENST00000335793 GYS1P13807 737 aa17.92■□□□□ 0.46
CDC42EP4-201ENST00000335793 EZRP15311 586 aaKnown RBP17.92■□□□□ 0.46
CDC42EP4-201ENST00000335793 TNFAIP3P21580 790 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 133.9 ms