RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 AZI2Q9H6S1 392 aa14.9□□□□□ -0.02
SYNE3-201ENST00000334258 AMFRQ9UKV5 643 aa14.9□□□□□ -0.02
SYNE3-201ENST00000334258 SNX24Q9Y343 169 aa14.9□□□□□ -0.02
SYNE3-201ENST00000334258 COL1A1P02452 1464 aaPredicted RBP14.9□□□□□ -0.02
SYNE3-201ENST00000334258 WNK3Q9BYP7 1800 aa14.9□□□□□ -0.02
SYNE3-201ENST00000334258 NPHP3-ACAD11A0A0J9YXS1 232 aa14.9□□□□□ -0.02
SYNE3-201ENST00000334258 TTC36A6NLP5 189 aa14.9□□□□□ -0.02
SYNE3-201ENST00000334258 CCDC169A6NNP5 214 aa14.9□□□□□ -0.02
SYNE3-201ENST00000334258 UCHL3P15374 230 aa14.9□□□□□ -0.02
SYNE3-201ENST00000334258 ABCB4P21439 1286 aa14.9□□□□□ -0.02
SYNE3-201ENST00000334258 GPSM2P81274 684 aa14.9□□□□□ -0.02
SYNE3-201ENST00000334258 EXOC3L4Q17RC7 722 aa14.9□□□□□ -0.02
SYNE3-201ENST00000334258 LRRC57Q8N9N7 239 aa14.9□□□□□ -0.02
SYNE3-201ENST00000334258 NEK9Q8TD19 979 aa14.9□□□□□ -0.02
SYNE3-201ENST00000334258 GLG1Q92896 1179 aa14.9□□□□□ -0.02
SYNE3-201ENST00000334258 SEPT11Q9NVA2 429 aaKnown RBP14.9□□□□□ -0.02
SYNE3-201ENST00000334258 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.9□□□□□ -0.02
SYNE3-201ENST00000334258 HDAC9Q9UKV0 1011 aa14.9□□□□□ -0.02
SYNE3-201ENST00000334258 GOLGA6L10A0A0M3HER8 536 aa14.9□□□□□ -0.02
SYNE3-201ENST00000334258 SLURP2P0DP57 97 aa14.9□□□□□ -0.02
SYNE3-201ENST00000334258 PEX19P40855 299 aa14.9□□□□□ -0.02
SYNE3-201ENST00000334258 TRPM8Q7Z2W7 1104 aa14.9□□□□□ -0.02
SYNE3-201ENST00000334258 COL23A1Q86Y22 540 aaPredicted RBP14.9□□□□□ -0.02
SYNE3-201ENST00000334258 SYCE1Q8N0S2 351 aa14.9□□□□□ -0.02
SYNE3-201ENST00000334258 TGFBRAP1Q8WUH2 860 aa14.9□□□□□ -0.02
SYNE3-201ENST00000334258 EMILIN3Q9NT22 766 aa14.9□□□□□ -0.02
SYNE3-201ENST00000334258 ARMCX3Q9UH62 379 aaPredicted RBP14.9□□□□□ -0.02
SYNE3-201ENST00000334258 DAAM1Q9Y4D1 1078 aa14.9□□□□□ -0.02
SYNE3-201ENST00000334258 BZW2Q9Y6E2 419 aaKnown RBP14.9□□□□□ -0.02
SYNE3-201ENST00000334258 IFI35P80217 286 aaPredicted RBP14.89□□□□□ -0.03
SYNE3-201ENST00000334258 DR1Q01658 176 aa14.89□□□□□ -0.03
SYNE3-201ENST00000334258 ZCWPW2Q504Y3 356 aa14.89□□□□□ -0.03
SYNE3-201ENST00000334258 IRF2BP2Q7Z5L9 587 aa14.89□□□□□ -0.03
SYNE3-201ENST00000334258 MGARPQ8TDB4 240 aa14.89□□□□□ -0.03
SYNE3-201ENST00000334258 SPDL1Q96EA4 605 aa14.89□□□□□ -0.03
SYNE3-201ENST00000334258 HOOK2Q96ED9 719 aa14.89□□□□□ -0.03
SYNE3-201ENST00000334258 MTMR9Q96QG7 549 aa14.89□□□□□ -0.03
SYNE3-201ENST00000334258 NSRP1Q9H0G5 558 aaKnown RBP14.89□□□□□ -0.03
SYNE3-201ENST00000334258 GANQ9H2C0 597 aa14.89□□□□□ -0.03
SYNE3-201ENST00000334258 KIAA1024Q9UPX6 916 aa14.89□□□□□ -0.03
SYNE3-201ENST00000334258 STK38LQ9Y2H1 464 aa14.89□□□□□ -0.03
SYNE3-201ENST00000334258 NR2E1Q9Y466 385 aa14.89□□□□□ -0.03
SYNE3-201ENST00000334258 E9PMD0 336 aa14.89□□□□□ -0.03
SYNE3-201ENST00000334258 CDC25CP30307 473 aa14.89□□□□□ -0.03
SYNE3-201ENST00000334258 FXR2P51116 673 aaKnown RBP eCLIP14.89□□□□□ -0.03
SYNE3-201ENST00000334258 CCNHP51946 323 aaPredicted RBP14.89□□□□□ -0.03
SYNE3-201ENST00000334258 PMS2P54278 862 aa14.89□□□□□ -0.03
SYNE3-201ENST00000334258 ZNF211Q13398 564 aaPredicted RBP14.89□□□□□ -0.03
SYNE3-201ENST00000334258 ZKSCAN8Q15776 578 aaPredicted RBP14.89□□□□□ -0.03
SYNE3-201ENST00000334258 DOK7Q18PE1 504 aa14.89□□□□□ -0.03
SYNE3-201ENST00000334258 SPTY2D1Q68D10 685 aaPredicted RBP14.89□□□□□ -0.03
SYNE3-201ENST00000334258 TLDC1Q6P9B6 456 aa14.89□□□□□ -0.03
SYNE3-201ENST00000334258 MICAL1Q8TDZ2 1067 aa14.89□□□□□ -0.03
SYNE3-201ENST00000334258 ECM1Q16610 540 aa14.88□□□□□ -0.03
SYNE3-201ENST00000334258 GPBP1Q86WP2 473 aa14.88□□□□□ -0.03
SYNE3-201ENST00000334258 MAPKAPK5Q8IW41 473 aa14.88□□□□□ -0.03
SYNE3-201ENST00000334258 ITFG2Q969R8 447 aa14.88□□□□□ -0.03
SYNE3-201ENST00000334258 BCORQ6W2J9 1755 aa14.88□□□□□ -0.03
SYNE3-201ENST00000334258 EME2A4GXA9 379 aaPredicted RBP14.88□□□□□ -0.03
SYNE3-201ENST00000334258 ONECUT3O60422 494 aaPredicted RBP14.88□□□□□ -0.03
SYNE3-201ENST00000334258 EN1Q05925 392 aaPredicted RBP14.88□□□□□ -0.03
SYNE3-201ENST00000334258 SLC29A2Q14542 456 aa14.88□□□□□ -0.03
SYNE3-201ENST00000334258 TLCD1Q96CP7 247 aa14.88□□□□□ -0.03
SYNE3-201ENST00000334258 DNAJC19Q96DA6 116 aa14.88□□□□□ -0.03
SYNE3-201ENST00000334258 SPZ1Q9BXG8 430 aa14.88□□□□□ -0.03
SYNE3-201ENST00000334258 FRMPD2Q68DX3 1309 aaPredicted RBP14.88□□□□□ -0.03
SYNE3-201ENST00000334258 AP1G2O75843 785 aa14.88□□□□□ -0.03
SYNE3-201ENST00000334258 ADCY7P51828 1080 aa14.88□□□□□ -0.03
SYNE3-201ENST00000334258 CCDC38Q502W7 563 aa14.88□□□□□ -0.03
SYNE3-201ENST00000334258 SLC10A5Q5PT55 438 aa14.88□□□□□ -0.03
SYNE3-201ENST00000334258 SH3RF3Q8TEJ3 882 aaPredicted RBP14.88□□□□□ -0.03
SYNE3-201ENST00000334258 ZNF317Q96PQ6 595 aaPredicted RBP14.88□□□□□ -0.03
SYNE3-201ENST00000334258 ABCF3Q9NUQ8 709 aa14.88□□□□□ -0.03
SYNE3-201ENST00000334258 SUCLA2Q9P2R7 463 aaPredicted RBP14.88□□□□□ -0.03
SYNE3-201ENST00000334258 DIAPH2O60879 1101 aa14.87□□□□□ -0.03
SYNE3-201ENST00000334258 XRCC5P13010 732 aaKnown RBP14.87□□□□□ -0.03
SYNE3-201ENST00000334258 PDIA5Q14554 519 aa14.87□□□□□ -0.03
SYNE3-201ENST00000334258 AP1ARQ63HQ0 302 aa14.87□□□□□ -0.03
SYNE3-201ENST00000334258 OSGEPQ9NPF4 335 aa14.87□□□□□ -0.03
SYNE3-201ENST00000334258 PCDHA12Q9UN75 941 aa14.87□□□□□ -0.03
SYNE3-201ENST00000334258 ANKRD36CQ5JPF3 1778 aa14.87□□□□□ -0.03
SYNE3-201ENST00000334258 DOCK2Q92608 1830 aa14.87□□□□□ -0.03
SYNE3-201ENST00000334258 PPFIA2O75334 1257 aa14.87□□□□□ -0.03
SYNE3-201ENST00000334258 GFPT2O94808 682 aa14.87□□□□□ -0.03
SYNE3-201ENST00000334258 MMP10P09238 476 aa14.87□□□□□ -0.03
SYNE3-201ENST00000334258 KCNJ2P63252 427 aa14.87□□□□□ -0.03
SYNE3-201ENST00000334258 LRRC14Q15048 493 aa14.87□□□□□ -0.03
SYNE3-201ENST00000334258 NT5DC3Q86UY8 548 aa14.87□□□□□ -0.03
SYNE3-201ENST00000334258 CCDC25Q86WR0 208 aa14.87□□□□□ -0.03
SYNE3-201ENST00000334258 AGAP11Q8TF27 550 aa14.87□□□□□ -0.03
SYNE3-201ENST00000334258 SCFD1Q8WVM8 642 aa14.87□□□□□ -0.03
SYNE3-201ENST00000334258 CENPTQ96BT3 561 aa14.87□□□□□ -0.03
SYNE3-201ENST00000334258 EYA3Q99504 573 aa14.87□□□□□ -0.03
SYNE3-201ENST00000334258 PABPC3Q9H361 631 aaKnown RBP14.87□□□□□ -0.03
SYNE3-201ENST00000334258 BTNL10A8MVZ5 291 aa14.86□□□□□ -0.03
SYNE3-201ENST00000334258 ASAP2O43150 1006 aa14.86□□□□□ -0.03
SYNE3-201ENST00000334258 UBOX5O94941 541 aa14.86□□□□□ -0.03
SYNE3-201ENST00000334258 AFPP02771 609 aaKnown RBP14.86□□□□□ -0.03
SYNE3-201ENST00000334258 SLC8A3P57103 927 aa14.86□□□□□ -0.03
SYNE3-201ENST00000334258 GJB7Q6PEY0 223 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms