RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 ANKS4BQ8N8V4 417 aa12.87□□□□□ -0.35
HDAC6-201ENST00000334136 FAM167AQ96KS9 214 aa12.87□□□□□ -0.35
HDAC6-201ENST00000334136 AKT3Q9Y243 479 aa12.87□□□□□ -0.35
HDAC6-201ENST00000334136 STAM2O75886 525 aa12.87□□□□□ -0.35
HDAC6-201ENST00000334136 GH1P01241 217 aa12.87□□□□□ -0.35
HDAC6-201ENST00000334136 VIMP08670 466 aaKnown RBP12.87□□□□□ -0.35
HDAC6-201ENST00000334136 Q3C1V9 767 aa12.87□□□□□ -0.35
HDAC6-201ENST00000334136 NEK9Q8TD19 979 aa12.87□□□□□ -0.35
HDAC6-201ENST00000334136 HAUS4Q9H6D7 363 aa12.87□□□□□ -0.35
HDAC6-201ENST00000334136 PXMP2Q9NR77 195 aa12.87□□□□□ -0.35
HDAC6-201ENST00000334136 JRKLQ9Y4A0 524 aa12.87□□□□□ -0.35
HDAC6-201ENST00000334136 TMEM110-MUSTN1A8MSY1 372 aa12.86□□□□□ -0.35
HDAC6-201ENST00000334136 EPHA7Q15375 998 aa12.86□□□□□ -0.35
HDAC6-201ENST00000334136 FAM26FQ5R3K3 315 aa12.86□□□□□ -0.35
HDAC6-201ENST00000334136 LBX2Q6XYB7 198 aa12.86□□□□□ -0.35
HDAC6-201ENST00000334136 TEX2Q8IWB9 1127 aa12.86□□□□□ -0.35
HDAC6-201ENST00000334136 IFT20Q8IY31 132 aa12.86□□□□□ -0.35
HDAC6-201ENST00000334136 EXOC8Q8IYI6 725 aa12.86□□□□□ -0.35
HDAC6-201ENST00000334136 REM2Q8IYK8 340 aaPredicted RBP12.86□□□□□ -0.35
HDAC6-201ENST00000334136 ZNF579Q8NAF0 562 aaKnown RBP12.86□□□□□ -0.35
HDAC6-201ENST00000334136 DNERQ8NFT8 737 aa12.86□□□□□ -0.35
HDAC6-201ENST00000334136 SEPT1Q8WYJ6 367 aa12.86□□□□□ -0.35
HDAC6-201ENST00000334136 CCDC51Q96ER9 411 aa12.86□□□□□ -0.35
HDAC6-201ENST00000334136 C12orf42Q96LP6 360 aa12.86□□□□□ -0.35
HDAC6-201ENST00000334136 POTEB3A0JP26 581 aa12.86□□□□□ -0.35
HDAC6-201ENST00000334136 PP2D1A8MPX8 630 aa12.86□□□□□ -0.35
HDAC6-201ENST00000334136 POTECB2RU33 542 aa12.86□□□□□ -0.35
HDAC6-201ENST00000334136 TRIM66O15016 1216 aa12.86□□□□□ -0.35
HDAC6-201ENST00000334136 BUB1O43683 1085 aa12.86□□□□□ -0.35
HDAC6-201ENST00000334136 CEP104O60308 925 aa12.86□□□□□ -0.35
HDAC6-201ENST00000334136 PRPHP41219 470 aa12.86□□□□□ -0.35
HDAC6-201ENST00000334136 POTEBQ6S5H4 581 aa12.86□□□□□ -0.35
HDAC6-201ENST00000334136 TSGA10Q9BZW7 698 aa12.86□□□□□ -0.35
HDAC6-201ENST00000334136 CXCR5P32302 372 aa12.86□□□□□ -0.35
HDAC6-201ENST00000334136 APLP1P51693 650 aa12.86□□□□□ -0.35
HDAC6-201ENST00000334136 PSMC5P62195 406 aa12.86□□□□□ -0.35
HDAC6-201ENST00000334136 CACNB1Q02641 598 aaPredicted RBP12.86□□□□□ -0.35
HDAC6-201ENST00000334136 DMP1Q13316 513 aaPredicted RBP12.86□□□□□ -0.35
HDAC6-201ENST00000334136 PPP2R5AQ15172 486 aa12.86□□□□□ -0.35
HDAC6-201ENST00000334136 NKX2-3Q8TAU0 364 aa12.86□□□□□ -0.35
HDAC6-201ENST00000334136 BRI3BPQ8WY22 251 aa12.86□□□□□ -0.35
HDAC6-201ENST00000334136 GPRASP2Q96D09 838 aa12.86□□□□□ -0.35
HDAC6-201ENST00000334136 NOX5Q96PH1 765 aa12.86□□□□□ -0.35
HDAC6-201ENST00000334136 TMEM60Q9H2L4 133 aa12.86□□□□□ -0.35
HDAC6-201ENST00000334136 CETN3O15182 167 aa12.85□□□□□ -0.35
HDAC6-201ENST00000334136 STAT5BP51692 787 aa12.85□□□□□ -0.35
HDAC6-201ENST00000334136 PDIA5Q14554 519 aa12.85□□□□□ -0.35
HDAC6-201ENST00000334136 DCAF17Q5H9S7 520 aaPredicted RBP12.85□□□□□ -0.35
HDAC6-201ENST00000334136 METTL16Q86W50 562 aaKnown RBP12.85□□□□□ -0.35
HDAC6-201ENST00000334136 RIT2Q99578 217 aa12.85□□□□□ -0.35
HDAC6-201ENST00000334136 EIF2AK1Q9BQI3 630 aaKnown RBP12.85□□□□□ -0.35
HDAC6-201ENST00000334136 FAM184BQ9ULE4 1060 aa12.85□□□□□ -0.35
HDAC6-201ENST00000334136 FRMD4BQ9Y2L6 1034 aa12.85□□□□□ -0.35
HDAC6-201ENST00000334136 TRIM17Q9Y577 477 aa12.85□□□□□ -0.35
HDAC6-201ENST00000334136 H0YCG3 227 aa12.85□□□□□ -0.35
HDAC6-201ENST00000334136 K7ENM7 598 aa12.85□□□□□ -0.35
HDAC6-201ENST00000334136 TBC1D8O95759 1140 aa12.85□□□□□ -0.35
HDAC6-201ENST00000334136 MTF1Q14872 753 aa12.85□□□□□ -0.35
HDAC6-201ENST00000334136 SOCS4Q8WXH5 440 aa12.85□□□□□ -0.35
HDAC6-201ENST00000334136 LRP5O75197 1615 aa12.85□□□□□ -0.35
HDAC6-201ENST00000334136 KIF4AO95239 1232 aa12.85□□□□□ -0.35
HDAC6-201ENST00000334136 RARBP10826 455 aa12.85□□□□□ -0.35
HDAC6-201ENST00000334136 COPB1P53618 953 aaKnown RBP12.85□□□□□ -0.35
HDAC6-201ENST00000334136 CYP27A1Q02318 531 aa12.85□□□□□ -0.35
HDAC6-201ENST00000334136 TNFAIP2Q03169 654 aa12.85□□□□□ -0.35
HDAC6-201ENST00000334136 TFDP1Q14186 410 aa12.85□□□□□ -0.35
HDAC6-201ENST00000334136 FAM110CQ1W6H9 321 aa12.85□□□□□ -0.35
HDAC6-201ENST00000334136 TRIML1Q8N9V2 468 aa12.85□□□□□ -0.35
HDAC6-201ENST00000334136 GJA10Q969M2 543 aa12.85□□□□□ -0.35
HDAC6-201ENST00000334136 LXNQ9BS40 222 aa12.85□□□□□ -0.35
HDAC6-201ENST00000334136 TMEM106CQ9BVX2 250 aa12.85□□□□□ -0.35
HDAC6-201ENST00000334136 RGL1Q9NZL6 768 aa12.85□□□□□ -0.35
HDAC6-201ENST00000334136 RPN1P04843 607 aaKnown RBP12.84□□□□□ -0.35
HDAC6-201ENST00000334136 HOXA7P31268 230 aaPredicted RBP12.84□□□□□ -0.35
HDAC6-201ENST00000334136 FBXO16Q8IX29 292 aaPredicted RBP12.84□□□□□ -0.35
HDAC6-201ENST00000334136 MYOCDQ8IZQ8 938 aa12.84□□□□□ -0.35
HDAC6-201ENST00000334136 FAM49AQ9H0Q0 323 aaPredicted RBP12.84□□□□□ -0.35
HDAC6-201ENST00000334136 SLC39A2Q9NP94 309 aa12.84□□□□□ -0.35
HDAC6-201ENST00000334136 BAIAP2L1Q9UHR4 511 aa12.84□□□□□ -0.35
HDAC6-201ENST00000334136 SNED1Q8TER0 1413 aa12.84□□□□□ -0.35
HDAC6-201ENST00000334136 POTEFA5A3E0 1075 aa12.84□□□□□ -0.35
HDAC6-201ENST00000334136 E9PMD0 336 aa12.84□□□□□ -0.35
HDAC6-201ENST00000334136 FOXN1O15353 648 aa12.84□□□□□ -0.35
HDAC6-201ENST00000334136 GNASQ5JWF2 1037 aa12.84□□□□□ -0.35
HDAC6-201ENST00000334136 CEP85LQ5SZL2 805 aa12.84□□□□□ -0.35
HDAC6-201ENST00000334136 RESP18Q5W5W9 173 aa12.84□□□□□ -0.35
HDAC6-201ENST00000334136 POTEGQ6S5H5 508 aa12.84□□□□□ -0.35
HDAC6-201ENST00000334136 POTEEQ6S8J3 1075 aa12.84□□□□□ -0.35
HDAC6-201ENST00000334136 INO80B-WBP1J3KQ70 363 aa12.84□□□□□ -0.35
HDAC6-201ENST00000334136 CALUO43852 315 aaPredicted RBP12.84□□□□□ -0.35
HDAC6-201ENST00000334136 CFAP221Q4G0U5 840 aa12.84□□□□□ -0.35
HDAC6-201ENST00000334136 SH3D19Q5HYK7 790 aa12.84□□□□□ -0.35
HDAC6-201ENST00000334136 ENOX1Q8TC92 643 aaKnown RBP12.84□□□□□ -0.35
HDAC6-201ENST00000334136 INO80BQ9C086 356 aaPredicted RBP12.84□□□□□ -0.35
HDAC6-201ENST00000334136 DNAI2Q9GZS0 605 aa12.84□□□□□ -0.35
HDAC6-201ENST00000334136 KCNK9Q9NPC2 374 aa12.84□□□□□ -0.35
HDAC6-201ENST00000334136 CYP39A1Q9NYL5 469 aa12.84□□□□□ -0.35
HDAC6-201ENST00000334136 GNAT1P11488 350 aa12.84□□□□□ -0.35
HDAC6-201ENST00000334136 FUT2Q10981 343 aa12.84□□□□□ -0.35
HDAC6-201ENST00000334136 PAK2Q13177 524 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms