RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 NIFKQ9BYG3 293 aaKnown RBP18.37■□□□□ 0.53
SHOX-201ENST00000334060 IKZF4Q9H2S9 585 aa18.37■□□□□ 0.53
SHOX-201ENST00000334060 PDLIM7Q9NR12 457 aa18.37■□□□□ 0.53
SHOX-201ENST00000334060 TBC1D7Q9P0N9 293 aa18.37■□□□□ 0.53
SHOX-201ENST00000334060 MSCO60682 206 aa18.37■□□□□ 0.53
SHOX-201ENST00000334060 BMP6P22004 513 aa18.37■□□□□ 0.53
SHOX-201ENST00000334060 FAM47CQ5HY64 1035 aa18.37■□□□□ 0.53
SHOX-201ENST00000334060 SV2BQ7L1I2 683 aa18.37■□□□□ 0.53
SHOX-201ENST00000334060 OSBPL7Q9BZF2 842 aa18.37■□□□□ 0.53
SHOX-201ENST00000334060 NUP62CLQ9H1M0 184 aa18.37■□□□□ 0.53
SHOX-201ENST00000334060 TRMT13Q9NUP7 481 aaKnown RBP18.37■□□□□ 0.53
SHOX-201ENST00000334060 DBR1Q9UK59 544 aaKnown RBP18.37■□□□□ 0.53
SHOX-201ENST00000334060 HIP1RO75146 1068 aa18.36■□□□□ 0.53
SHOX-201ENST00000334060 MBD3O95983 291 aa18.36■□□□□ 0.53
SHOX-201ENST00000334060 TMEM62Q0P6H9 643 aa18.36■□□□□ 0.53
SHOX-201ENST00000334060 VTI1AQ96AJ9 217 aa18.36■□□□□ 0.53
SHOX-201ENST00000334060 SUGCTQ9HAC7 445 aa18.36■□□□□ 0.53
SHOX-201ENST00000334060 ZNF215Q9UL58 517 aaPredicted RBP18.36■□□□□ 0.53
SHOX-201ENST00000334060 EVPLQ92817 2033 aa18.36■□□□□ 0.53
SHOX-201ENST00000334060 RRP9O43818 475 aaKnown RBP18.35■□□□□ 0.53
SHOX-201ENST00000334060 KLRC1P26715 233 aa18.35■□□□□ 0.53
SHOX-201ENST00000334060 GJA8P48165 433 aa18.35■□□□□ 0.53
SHOX-201ENST00000334060 ADAM17P78536 824 aa18.35■□□□□ 0.53
SHOX-201ENST00000334060 EMC2Q15006 297 aa18.35■□□□□ 0.53
SHOX-201ENST00000334060 ASAP3Q8TDY4 903 aa18.35■□□□□ 0.53
SHOX-201ENST00000334060 SENP6Q9GZR1 1112 aaPredicted RBP18.35■□□□□ 0.53
SHOX-201ENST00000334060 DHX33Q9H6R0 707 aaKnown RBP18.35■□□□□ 0.53
SHOX-201ENST00000334060 ANKEF1Q9NU02 776 aa18.35■□□□□ 0.53
SHOX-201ENST00000334060 USP20Q9Y2K6 914 aa18.35■□□□□ 0.53
SHOX-201ENST00000334060 HBP1O60381 514 aa18.35■□□□□ 0.53
SHOX-201ENST00000334060 IDEP14735 1019 aa18.35■□□□□ 0.53
SHOX-201ENST00000334060 ASIC1P78348 528 aa18.35■□□□□ 0.53
SHOX-201ENST00000334060 ITGA7Q13683 1181 aa18.35■□□□□ 0.53
SHOX-201ENST00000334060 TIGD1Q96MW7 591 aa18.35■□□□□ 0.53
SHOX-201ENST00000334060 TRPV6Q9H1D0 765 aa18.35■□□□□ 0.53
SHOX-201ENST00000334060 TNMDQ9H2S6 317 aa18.35■□□□□ 0.53
SHOX-201ENST00000334060 ZHX3Q9H4I2 956 aa18.35■□□□□ 0.53
SHOX-201ENST00000334060 PHF24Q9UPV7 400 aa18.35■□□□□ 0.53
SHOX-201ENST00000334060 SYCE3A1L190 88 aa18.34■□□□□ 0.53
SHOX-201ENST00000334060 DNM1LO00429 736 aa18.34■□□□□ 0.53
SHOX-201ENST00000334060 CSDE1O75534 798 aaKnown RBP18.34■□□□□ 0.53
SHOX-201ENST00000334060 CASP5P51878 434 aa18.34■□□□□ 0.53
SHOX-201ENST00000334060 BRDTQ58F21 947 aaPredicted RBP18.34■□□□□ 0.53
SHOX-201ENST00000334060 FAM102BQ5T8I3 360 aa18.34■□□□□ 0.53
SHOX-201ENST00000334060 MTHFD1LQ6UB35 978 aa18.34■□□□□ 0.53
SHOX-201ENST00000334060 FAM49AQ9H0Q0 323 aaPredicted RBP18.34■□□□□ 0.53
SHOX-201ENST00000334060 NRBP2Q9NSY0 501 aa18.34■□□□□ 0.53
SHOX-201ENST00000334060 ADGRA3Q8IWK6 1321 aa18.34■□□□□ 0.53
SHOX-201ENST00000334060 VTNP04004 478 aa18.33■□□□□ 0.53
SHOX-201ENST00000334060 MUTP22033 750 aa18.33■□□□□ 0.53
SHOX-201ENST00000334060 POLGP54098 1239 aaPredicted RBP18.33■□□□□ 0.53
SHOX-201ENST00000334060 KMT5BQ4FZB7 885 aa18.33■□□□□ 0.53
SHOX-201ENST00000334060 METTL13Q8N6R0 699 aa18.33■□□□□ 0.53
SHOX-201ENST00000334060 PCSK9Q8NBP7 692 aaKnown RBP18.33■□□□□ 0.53
SHOX-201ENST00000334060 PAWRQ96IZ0 340 aaKnown RBP18.33■□□□□ 0.53
SHOX-201ENST00000334060 C7orf25Q9BPX7 421 aa18.33■□□□□ 0.53
SHOX-201ENST00000334060 GDAQ9Y2T3 454 aa18.33■□□□□ 0.53
SHOX-201ENST00000334060 KBTBD13C9JR72 458 aa18.33■□□□□ 0.52
SHOX-201ENST00000334060 GTPBP6O43824 516 aaPredicted RBP18.33■□□□□ 0.52
SHOX-201ENST00000334060 HOXC8P31273 242 aa18.33■□□□□ 0.52
SHOX-201ENST00000334060 TBC1D8BQ0IIM8 1120 aa18.33■□□□□ 0.52
SHOX-201ENST00000334060 EFCAB12Q6NXP0 572 aa18.33■□□□□ 0.52
SHOX-201ENST00000334060 OTUD6AQ7L8S5 288 aa18.33■□□□□ 0.52
SHOX-201ENST00000334060 SFR1Q86XK3 245 aa18.33■□□□□ 0.52
SHOX-201ENST00000334060 LINC01465Q8N7H1 131 aa18.33■□□□□ 0.52
SHOX-201ENST00000334060 C7orf31Q8N865 590 aa18.33■□□□□ 0.52
SHOX-201ENST00000334060 ARRDC4Q8NCT1 418 aa18.33■□□□□ 0.52
SHOX-201ENST00000334060 PKNOX2Q96KN3 472 aa18.33■□□□□ 0.52
SHOX-201ENST00000334060 CCDC43Q96MW1 224 aaKnown RBP18.33■□□□□ 0.52
SHOX-201ENST00000334060 FIZ1Q96SL8 496 aa18.33■□□□□ 0.52
SHOX-201ENST00000334060 CDHR5Q9HBB8 845 aa18.33■□□□□ 0.52
SHOX-201ENST00000334060 STARD7Q9NQZ5 370 aa18.33■□□□□ 0.52
SHOX-201ENST00000334060 GTF2IRD1Q9UHL9 959 aa18.33■□□□□ 0.52
SHOX-201ENST00000334060 MAN1B1Q9UKM7 699 aa18.33■□□□□ 0.52
SHOX-201ENST00000334060 MAPK8IP1Q9UQF2 711 aa18.33■□□□□ 0.52
SHOX-201ENST00000334060 STK24Q9Y6E0 443 aa18.33■□□□□ 0.52
SHOX-201ENST00000334060 LAMA2P24043 3122 aaKnown RBP18.33■□□□□ 0.52
SHOX-201ENST00000334060 IGKV6-21A0A0C4DH24 114 aa18.32■□□□□ 0.52
SHOX-201ENST00000334060 MAFO75444 373 aaPredicted RBP18.32■□□□□ 0.52
SHOX-201ENST00000334060 SLC26A2P50443 739 aa18.32■□□□□ 0.52
SHOX-201ENST00000334060 COASYQ13057 564 aa18.32■□□□□ 0.52
SHOX-201ENST00000334060 ZSCAN23Q3MJ62 389 aa18.32■□□□□ 0.52
SHOX-201ENST00000334060 CCDC183Q5T5S1 534 aa18.32■□□□□ 0.52
SHOX-201ENST00000334060 NFRKBQ6P4R8 1299 aa18.32■□□□□ 0.52
SHOX-201ENST00000334060 DHX38Q92620 1227 aaKnown RBP18.32■□□□□ 0.52
SHOX-201ENST00000334060 POLR3FQ9H1D9 316 aaPredicted RBP18.32■□□□□ 0.52
SHOX-201ENST00000334060 TUBE1Q9UJT0 475 aa18.32■□□□□ 0.52
SHOX-201ENST00000334060 MOXD2PA6NHM9 499 aa18.31■□□□□ 0.52
SHOX-201ENST00000334060 B4GALT4O60513 344 aa18.31■□□□□ 0.52
SHOX-201ENST00000334060 RPN1P04843 607 aaKnown RBP18.31■□□□□ 0.52
SHOX-201ENST00000334060 EDN1P05305 212 aa18.31■□□□□ 0.52
SHOX-201ENST00000334060 KRT18P05783 430 aaKnown RBP18.31■□□□□ 0.52
SHOX-201ENST00000334060 CYP2C9P11712 490 aa18.31■□□□□ 0.52
SHOX-201ENST00000334060 XRCC6P12956 609 aaKnown RBP eCLIP18.31■□□□□ 0.52
SHOX-201ENST00000334060 NMT1P30419 496 aaKnown RBP18.31■□□□□ 0.52
SHOX-201ENST00000334060 SARSP49591 514 aaKnown RBP18.31■□□□□ 0.52
SHOX-201ENST00000334060 KCNA1Q09470 495 aa18.31■□□□□ 0.52
SHOX-201ENST00000334060 STK4Q13043 487 aa18.31■□□□□ 0.52
SHOX-201ENST00000334060 SPATA20Q8TB22 786 aa18.31■□□□□ 0.52
SHOX-201ENST00000334060 FAM167AQ96KS9 214 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms