RNA–Protein interactions for RNA: ENST00000333896.5

SPTBN1-201, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTBN1, Length 9,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-201ENST00000333896 SKA1Q96BD8 255 aa11.01□□□□□ -0.65
SPTBN1-201ENST00000333896 TMEM245Q9H330 911 aa11.01□□□□□ -0.65
SPTBN1-201ENST00000333896 NHEJ1Q9H9Q4 299 aaPredicted RBP11.01□□□□□ -0.65
SPTBN1-201ENST00000333896 SAP30BPQ9UHR5 308 aaKnown RBP11.01□□□□□ -0.65
SPTBN1-201ENST00000333896 ADNPQ9H2P0 1102 aa11.01□□□□□ -0.65
SPTBN1-201ENST00000333896 PRG3Q9Y2Y8 225 aaPredicted RBP11.01□□□□□ -0.65
SPTBN1-201ENST00000333896 GOLGA8RI6L899 631 aa11.01□□□□□ -0.65
SPTBN1-201ENST00000333896 MT-ND3P03897 115 aa11.01□□□□□ -0.65
SPTBN1-201ENST00000333896 H2AFZP0C0S5 128 aa11.01□□□□□ -0.65
SPTBN1-201ENST00000333896 PMLP29590 882 aa11.01□□□□□ -0.65
SPTBN1-201ENST00000333896 THOC5Q13769 683 aaKnown RBP11.01□□□□□ -0.65
SPTBN1-201ENST00000333896 ACAD11Q709F0 780 aa11.01□□□□□ -0.65
SPTBN1-201ENST00000333896 H2AFVQ71UI9 128 aa11.01□□□□□ -0.65
SPTBN1-201ENST00000333896 TRIM74Q86UV6 250 aa11.01□□□□□ -0.65
SPTBN1-201ENST00000333896 TRIM73Q86UV7 250 aa11.01□□□□□ -0.65
SPTBN1-201ENST00000333896 FAM161BQ96MY7 647 aa11.01□□□□□ -0.65
SPTBN1-201ENST00000333896 CCT7Q99832 543 aa11.01□□□□□ -0.65
SPTBN1-201ENST00000333896 CD248Q9HCU0 757 aa11.01□□□□□ -0.65
SPTBN1-201ENST00000333896 RNF103-CHMP3A0A140T963 221 aa11.01□□□□□ -0.65
SPTBN1-201ENST00000333896 SOWAHDA6NJG2 315 aa11.01□□□□□ -0.65
SPTBN1-201ENST00000333896 CITO14578 2027 aa11.01□□□□□ -0.65
SPTBN1-201ENST00000333896 IL10P22301 178 aa11.01□□□□□ -0.65
SPTBN1-201ENST00000333896 PLTPP55058 493 aa11.01□□□□□ -0.65
SPTBN1-201ENST00000333896 VCPP55072 806 aaKnown RBP11.01□□□□□ -0.65
SPTBN1-201ENST00000333896 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.01□□□□□ -0.654e-12■■■□□ 16.2
SPTBN1-201ENST00000333896 FNDC3AQ9Y2H6 1198 aaKnown RBP11.01□□□□□ -0.65
SPTBN1-201ENST00000333896 SPAG17Q6Q759 2223 aa11.01□□□□□ -0.65
SPTBN1-201ENST00000333896 PRAG1Q86YV5 1406 aa11.01□□□□□ -0.65
SPTBN1-201ENST00000333896 PI4KAP2A4QPH2 592 aa11.01□□□□□ -0.65
SPTBN1-201ENST00000333896 SERPING1P05155 500 aa11.01□□□□□ -0.65
SPTBN1-201ENST00000333896 AARS2Q5JTZ9 985 aaKnown RBP11.01□□□□□ -0.65
SPTBN1-201ENST00000333896 KDM7AQ6ZMT4 941 aa11.01□□□□□ -0.65
SPTBN1-201ENST00000333896 PI4KAP1Q8N8J0 262 aa11.01□□□□□ -0.65
SPTBN1-201ENST00000333896 SEC24DO94855 1032 aaPredicted RBP11.01□□□□□ -0.65
SPTBN1-201ENST00000333896 ATP5JP18859 108 aa11.01□□□□□ -0.65
SPTBN1-201ENST00000333896 CDC27P30260 824 aa11.01□□□□□ -0.65
SPTBN1-201ENST00000333896 KRT72Q14CN4 511 aa11.01□□□□□ -0.65
SPTBN1-201ENST00000333896 KRT27Q7Z3Y8 459 aa11.01□□□□□ -0.65
SPTBN1-201ENST00000333896 PARP3Q9Y6F1 533 aa11.01□□□□□ -0.65
SPTBN1-201ENST00000333896 SOX6P35712 828 aa11.01□□□□□ -0.65
SPTBN1-201ENST00000333896 RASSF7Q02833 373 aa11.01□□□□□ -0.65
SPTBN1-201ENST00000333896 TTC38Q5R3I4 469 aa11.01□□□□□ -0.65
SPTBN1-201ENST00000333896 MCRS1Q96EZ8 462 aa11.01□□□□□ -0.65
SPTBN1-201ENST00000333896 PRELID1Q9Y255 219 aa11.01□□□□□ -0.65
SPTBN1-201ENST00000333896 COMMD3-BMI1R4GMX3 469 aa11.01□□□□□ -0.65
SPTBN1-201ENST00000333896 M0R3G1 203 aa11.01□□□□□ -0.65
SPTBN1-201ENST00000333896 ENC1O14682 589 aa11.01□□□□□ -0.65
SPTBN1-201ENST00000333896 TSC22D2O75157 780 aa11.01□□□□□ -0.65
SPTBN1-201ENST00000333896 CLPTM1O96005 669 aa11.01□□□□□ -0.65
SPTBN1-201ENST00000333896 NLRP11P59045 1033 aaKnown RBP11.01□□□□□ -0.65
SPTBN1-201ENST00000333896 EXT2Q93063 718 aa11.01□□□□□ -0.65
SPTBN1-201ENST00000333896 PRPF18Q99633 342 aaKnown RBP11.01□□□□□ -0.65
SPTBN1-201ENST00000333896 POGZQ7Z3K3 1410 aa11□□□□□ -0.65
SPTBN1-201ENST00000333896 RNF113AO15541 343 aaKnown RBP11□□□□□ -0.65
SPTBN1-201ENST00000333896 MFAP3LO75121 409 aa11□□□□□ -0.65
SPTBN1-201ENST00000333896 TRIM71Q2Q1W2 868 aaKnown RBP11□□□□□ -0.65
SPTBN1-201ENST00000333896 ZNF555Q8NEP9 628 aa11□□□□□ -0.65
SPTBN1-201ENST00000333896 ATP8B4Q8TF62 1192 aa11□□□□□ -0.65
SPTBN1-201ENST00000333896 SOX5P35711 763 aa11□□□□□ -0.65
SPTBN1-201ENST00000333896 ADCK5Q3MIX3 580 aa11□□□□□ -0.65
SPTBN1-201ENST00000333896 PPARGC1AQ9UBK2 798 aaKnown RBP11□□□□□ -0.65
SPTBN1-201ENST00000333896 DISP3Q9P2K9 1392 aa11□□□□□ -0.65
SPTBN1-201ENST00000333896 A0A0G2JND7 137 aa11□□□□□ -0.65
SPTBN1-201ENST00000333896 AARSP49588 968 aaKnown RBP eCLIP11□□□□□ -0.65
SPTBN1-201ENST00000333896 ATN1P54259 1190 aaPredicted RBP11□□□□□ -0.65
SPTBN1-201ENST00000333896 RIPPLY1Q0D2K3 151 aa11□□□□□ -0.65
SPTBN1-201ENST00000333896 DHX34Q14147 1143 aaKnown RBP11□□□□□ -0.65
SPTBN1-201ENST00000333896 USH1GQ495M9 461 aa11□□□□□ -0.65
SPTBN1-201ENST00000333896 BRDTQ58F21 947 aaPredicted RBP11□□□□□ -0.65
SPTBN1-201ENST00000333896 ATAD3BQ5T9A4 648 aa11□□□□□ -0.65
SPTBN1-201ENST00000333896 WDR93Q6P2C0 686 aa11□□□□□ -0.65
SPTBN1-201ENST00000333896 HACE1Q8IYU2 909 aa11□□□□□ -0.65
SPTBN1-201ENST00000333896 RIBC1Q8N443 379 aaPredicted RBP11□□□□□ -0.65
SPTBN1-201ENST00000333896 BEGAINQ9BUH8 593 aa11□□□□□ -0.65
SPTBN1-201ENST00000333896 PIK3CAP42336 1068 aa11□□□□□ -0.65
SPTBN1-201ENST00000333896 SGO2Q562F6 1265 aa11□□□□□ -0.65
SPTBN1-201ENST00000333896 OSBPL10Q9BXB5 764 aa11□□□□□ -0.65
SPTBN1-201ENST00000333896 ZSWIM6Q9HCJ5 1215 aa11□□□□□ -0.65
SPTBN1-201ENST00000333896 TYW5A2RUC4 315 aaKnown RBP11□□□□□ -0.65
SPTBN1-201ENST00000333896 MEIS3Q99687 375 aa11□□□□□ -0.65
SPTBN1-201ENST00000333896 WWP1Q9H0M0 922 aa11□□□□□ -0.65
SPTBN1-201ENST00000333896 USE1Q9NZ43 259 aa11□□□□□ -0.65
SPTBN1-201ENST00000333896 EIF2AK3Q9NZJ5 1116 aaKnown RBP11□□□□□ -0.65
SPTBN1-201ENST00000333896 ATP6V1HQ9UI12 483 aa11□□□□□ -0.65
SPTBN1-201ENST00000333896 ANKRD65E5RJM6 399 aa11□□□□□ -0.65
SPTBN1-201ENST00000333896 CDH2P19022 906 aaPredicted RBP11□□□□□ -0.65
SPTBN1-201ENST00000333896 BFSP2Q13515 415 aa11□□□□□ -0.65
SPTBN1-201ENST00000333896 CCDC149Q6ZUS6 474 aa11□□□□□ -0.65
SPTBN1-201ENST00000333896 C16orf71Q8IYS4 520 aaPredicted RBP11□□□□□ -0.65
SPTBN1-201ENST00000333896 KCNK16Q96T55 309 aa11□□□□□ -0.65
SPTBN1-201ENST00000333896 ZBTB18Q99592 522 aa11□□□□□ -0.65
SPTBN1-201ENST00000333896 TUBGCP2Q9BSJ2 902 aa11□□□□□ -0.65
SPTBN1-201ENST00000333896 ADA2Q9NZK5 511 aa11□□□□□ -0.65
SPTBN1-201ENST00000333896 STOML2Q9UJZ1 356 aa11□□□□□ -0.65
SPTBN1-201ENST00000333896 PLCG2P16885 1265 aa11□□□□□ -0.65
SPTBN1-201ENST00000333896 KLHL38Q2WGJ6 581 aa11□□□□□ -0.65
SPTBN1-201ENST00000333896 DISC1Q9NRI5 854 aa11□□□□□ -0.65
SPTBN1-201ENST00000333896 ABCC12Q96J65 1359 aa10.99□□□□□ -0.65
SPTBN1-201ENST00000333896 A8MXQ7 604 aa10.99□□□□□ -0.65
SPTBN1-201ENST00000333896 GRM8O00222 908 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms