RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 MOXD1Q6UVY6 613 aa15.31■□□□□ 0.04
ATP2C1-201ENST00000328560 EPM2AIP1Q7L775 607 aaPredicted RBP15.31■□□□□ 0.04
ATP2C1-201ENST00000328560 OGFOD1Q8N543 542 aa15.31■□□□□ 0.04
ATP2C1-201ENST00000328560 DDX3XO00571 662 aaKnown RBP eCLIP15.31■□□□□ 0.042e-8■■■■□ 19.4
ATP2C1-201ENST00000328560 TGFB1I1O43294 461 aa15.31■□□□□ 0.04
ATP2C1-201ENST00000328560 EVI5O60447 810 aa15.31■□□□□ 0.04
ATP2C1-201ENST00000328560 ODR4Q5SWX8 454 aa15.31■□□□□ 0.04
ATP2C1-201ENST00000328560 FAM178BQ8IXR5 827 aa15.31■□□□□ 0.04
ATP2C1-201ENST00000328560 TPCN2Q8NHX9 752 aa15.31■□□□□ 0.04
ATP2C1-201ENST00000328560 CRYGNQ8WXF5 182 aa15.31■□□□□ 0.04
ATP2C1-201ENST00000328560 PRMT6Q96LA8 375 aaPredicted RBP15.31■□□□□ 0.04
ATP2C1-201ENST00000328560 OSGEPQ9NPF4 335 aa15.31■□□□□ 0.04
ATP2C1-201ENST00000328560 AMACRQ9UHK6 382 aa15.31■□□□□ 0.04
ATP2C1-201ENST00000328560 NDUFAB1O14561 156 aa15.31■□□□□ 0.04
ATP2C1-201ENST00000328560 SART1O43290 800 aaKnown RBP15.31■□□□□ 0.04
ATP2C1-201ENST00000328560 CHRNA5P30532 468 aa15.31■□□□□ 0.04
ATP2C1-201ENST00000328560 PSMC2P35998 433 aaKnown RBP15.31■□□□□ 0.04
ATP2C1-201ENST00000328560 ERVK-9P63128 1117 aa15.31■□□□□ 0.04
ATP2C1-201ENST00000328560 GUCY1A3Q02108 690 aa15.31■□□□□ 0.04
ATP2C1-201ENST00000328560 DACT2Q5SW24 774 aa15.31■□□□□ 0.04
ATP2C1-201ENST00000328560 CC2D2BQ6DHV5 1058 aa15.31■□□□□ 0.04
ATP2C1-201ENST00000328560 HS2ST1Q7LGA3 356 aa15.31■□□□□ 0.04
ATP2C1-201ENST00000328560 RUBCNQ92622 972 aa15.31■□□□□ 0.04
ATP2C1-201ENST00000328560 SH3GL2Q99962 352 aa15.31■□□□□ 0.04
ATP2C1-201ENST00000328560 SH2D3AQ9BRG2 576 aa15.31■□□□□ 0.04
ATP2C1-201ENST00000328560 WDR18Q9BV38 432 aa15.31■□□□□ 0.04
ATP2C1-201ENST00000328560 DPH5Q9H2P9 285 aa15.31■□□□□ 0.04
ATP2C1-201ENST00000328560 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.31■□□□□ 0.04
ATP2C1-201ENST00000328560 DNAJC12Q9UKB3 198 aa15.31■□□□□ 0.04
ATP2C1-201ENST00000328560 PLAAQ9Y263 795 aa15.31■□□□□ 0.04
ATP2C1-201ENST00000328560 NOC2LQ9Y3T9 749 aaKnown RBP15.31■□□□□ 0.04
ATP2C1-201ENST00000328560 GALCP54803 685 aa15.3■□□□□ 0.04
ATP2C1-201ENST00000328560 PARVGQ9HBI0 331 aa15.3■□□□□ 0.04
ATP2C1-201ENST00000328560 ZBTB21Q9ULJ3 1066 aa15.3■□□□□ 0.04
ATP2C1-201ENST00000328560 PGRMC1O00264 195 aaKnown RBP15.3■□□□□ 0.04
ATP2C1-201ENST00000328560 SLITRK3O94933 977 aa15.3■□□□□ 0.04
ATP2C1-201ENST00000328560 USP8P40818 1118 aa15.3■□□□□ 0.04
ATP2C1-201ENST00000328560 STAT2P52630 851 aa15.3■□□□□ 0.04
ATP2C1-201ENST00000328560 DRAP1Q14919 205 aaPredicted RBP15.3■□□□□ 0.04
ATP2C1-201ENST00000328560 MCTP2Q6DN12 878 aa15.3■□□□□ 0.04
ATP2C1-201ENST00000328560 SIX2Q9NPC8 291 aa15.3■□□□□ 0.04
ATP2C1-201ENST00000328560 TAF1LQ8IZX4 1826 aa15.3■□□□□ 0.04
ATP2C1-201ENST00000328560 GOLGA6L10A6NI86 522 aa15.3■□□□□ 0.04
ATP2C1-201ENST00000328560 EIF3HO15372 352 aaKnown RBP eCLIP15.3■□□□□ 0.04
ATP2C1-201ENST00000328560 TATDN1Q6P1N9 297 aa15.3■□□□□ 0.04
ATP2C1-201ENST00000328560 ZC3H3Q8IXZ2 948 aaKnown RBP15.3■□□□□ 0.04
ATP2C1-201ENST00000328560 UBLCP1Q8WVY7 318 aaPredicted RBP15.3■□□□□ 0.04
ATP2C1-201ENST00000328560 CELF4Q9BZC1 486 aaKnown RBP15.3■□□□□ 0.04
ATP2C1-201ENST00000328560 PCIF1Q9H4Z3 704 aa15.3■□□□□ 0.04
ATP2C1-201ENST00000328560 ARHGEF10LQ9HCE6 1279 aa15.3■□□□□ 0.04
ATP2C1-201ENST00000328560 EXOC3O60645 756 aa15.29■□□□□ 0.04
ATP2C1-201ENST00000328560 HDLBPQ00341 1268 aaKnown RBP15.29■□□□□ 0.04
ATP2C1-201ENST00000328560 TRAF1Q13077 416 aa15.29■□□□□ 0.04
ATP2C1-201ENST00000328560 C10orf76Q5T2E6 689 aa15.29■□□□□ 0.04
ATP2C1-201ENST00000328560 IQCKQ8N0W5 287 aa15.29■□□□□ 0.04
ATP2C1-201ENST00000328560 MICALL1Q8N3F8 863 aa15.29■□□□□ 0.04
ATP2C1-201ENST00000328560 BANK1Q8NDB2 785 aa15.29■□□□□ 0.04
ATP2C1-201ENST00000328560 GMCL1Q96IK5 515 aa15.29■□□□□ 0.04
ATP2C1-201ENST00000328560 RNPC3Q96LT9 517 aaKnown RBP15.29■□□□□ 0.04
ATP2C1-201ENST00000328560 IDI2Q9BXS1 227 aa15.29■□□□□ 0.04
ATP2C1-201ENST00000328560 TAF1DQ9H5J8 278 aaPredicted RBP15.29■□□□□ 0.04
ATP2C1-201ENST00000328560 VEZTQ9HBM0 779 aa15.29■□□□□ 0.04
ATP2C1-201ENST00000328560 FRMD4BQ9Y2L6 1034 aa15.29■□□□□ 0.04
ATP2C1-201ENST00000328560 ADAMTSL1Q8N6G6 1762 aa15.29■□□□□ 0.04
ATP2C1-201ENST00000328560 MYH4Q9Y623 1939 aa15.29■□□□□ 0.04
ATP2C1-201ENST00000328560 COPB2P35606 906 aa15.29■□□□□ 0.04
ATP2C1-201ENST00000328560 DPY19L2P1Q6NXN4 242 aa15.29■□□□□ 0.04
ATP2C1-201ENST00000328560 PBKQ96KB5 322 aa15.29■□□□□ 0.04
ATP2C1-201ENST00000328560 SERPINA10Q9UK55 444 aa15.29■□□□□ 0.04
ATP2C1-201ENST00000328560 TMEM110-MUSTN1A8MSY1 372 aa15.29■□□□□ 0.04
ATP2C1-201ENST00000328560 GCOM1H8Y6P7 765 aaPredicted RBP15.29■□□□□ 0.04
ATP2C1-201ENST00000328560 DAPK3O43293 454 aa15.29■□□□□ 0.04
ATP2C1-201ENST00000328560 POLR2MP0CAP2 368 aa15.29■□□□□ 0.04
ATP2C1-201ENST00000328560 LIG3P49916 1009 aa15.29■□□□□ 0.04
ATP2C1-201ENST00000328560 KIAA1755Q5JYT7 1200 aa15.29■□□□□ 0.04
ATP2C1-201ENST00000328560 OTOP1Q7RTM1 612 aa15.29■□□□□ 0.04
ATP2C1-201ENST00000328560 SUPT20HQ8NEM7 779 aa15.29■□□□□ 0.04
ATP2C1-201ENST00000328560 LMBR1Q8WVP7 490 aa15.29■□□□□ 0.04
ATP2C1-201ENST00000328560 HOOK2Q96ED9 719 aa15.29■□□□□ 0.04
ATP2C1-201ENST00000328560 POLR3CQ9BUI4 534 aaPredicted RBP15.29■□□□□ 0.04
ATP2C1-201ENST00000328560 CHORDC1Q9UHD1 332 aaPredicted RBP15.29■□□□□ 0.04
ATP2C1-201ENST00000328560 THSD7AQ9UPZ6 1657 aa15.28■□□□□ 0.04
ATP2C1-201ENST00000328560 PLSCR1O15162 318 aa15.28■□□□□ 0.04
ATP2C1-201ENST00000328560 SHOX2O60902 331 aaPredicted RBP15.28■□□□□ 0.04
ATP2C1-201ENST00000328560 FERP16591 822 aa15.28■□□□□ 0.04
ATP2C1-201ENST00000328560 TNFRSF8P28908 595 aa15.28■□□□□ 0.04
ATP2C1-201ENST00000328560 ZNF211Q13398 564 aaPredicted RBP15.28■□□□□ 0.04
ATP2C1-201ENST00000328560 CBWD6Q4V339 395 aa15.28■□□□□ 0.04
ATP2C1-201ENST00000328560 ODF2Q5BJF6 829 aa15.28■□□□□ 0.04
ATP2C1-201ENST00000328560 CBWD3Q5JTY5 395 aa15.28■□□□□ 0.04
ATP2C1-201ENST00000328560 CBWD5Q5RIA9 395 aa15.28■□□□□ 0.04
ATP2C1-201ENST00000328560 LRRC57Q8N9N7 239 aa15.28■□□□□ 0.04
ATP2C1-201ENST00000328560 GMCL1P1Q8NEA9 526 aa15.28■□□□□ 0.04
ATP2C1-201ENST00000328560 WHAMMQ8TF30 809 aa15.28■□□□□ 0.04
ATP2C1-201ENST00000328560 ZNF577Q9BSK1 485 aa15.28■□□□□ 0.04
ATP2C1-201ENST00000328560 ARP10275 920 aa15.28■□□□□ 0.04
ATP2C1-201ENST00000328560 GAP43P17677 238 aa15.28■□□□□ 0.04
ATP2C1-201ENST00000328560 FMO5P49326 533 aa15.28■□□□□ 0.04
ATP2C1-201ENST00000328560 MIGA2Q7L4E1 593 aa15.28■□□□□ 0.04
ATP2C1-201ENST00000328560 CTNNBL1Q8WYA6 563 aaPredicted RBP15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms