RNA–Protein interactions for RNA: ENST00000325404.2

SOX2-201, Transcript of SRY-box 2, humanhuman

APPRIS P1 BASIC

Gene SOX2, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-201ENST00000325404 MTFR1LQ9H019 292 aa21.69■■□□□ 1.06
SOX2-201ENST00000325404 SYNPO2Q9UMS6 1093 aa21.69■■□□□ 1.06
SOX2-201ENST00000325404 PSME4Q14997 1843 aa21.69■■□□□ 1.06
SOX2-201ENST00000325404 PGRMC1O00264 195 aaKnown RBP21.69■■□□□ 1.06
SOX2-201ENST00000325404 H2AFZP0C0S5 128 aa21.69■■□□□ 1.06
SOX2-201ENST00000325404 CCT5P48643 541 aa21.69■■□□□ 1.06
SOX2-201ENST00000325404 BTNL9Q6UXG8 535 aa21.69■■□□□ 1.06
SOX2-201ENST00000325404 H2AFVQ71UI9 128 aa21.69■■□□□ 1.06
SOX2-201ENST00000325404 SIAH1Q8IUQ4 282 aa21.69■■□□□ 1.06
SOX2-201ENST00000325404 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.69■■□□□ 1.06
SOX2-201ENST00000325404 PACSIN2Q9UNF0 486 aaPredicted RBP21.69■■□□□ 1.06
SOX2-201ENST00000325404 STXBP5LQ9Y2K9 1186 aa21.69■■□□□ 1.06
SOX2-201ENST00000325404 PIK3CDO00329 1044 aa21.68■■□□□ 1.06
SOX2-201ENST00000325404 TBCAO75347 108 aaKnown RBP21.68■■□□□ 1.06
SOX2-201ENST00000325404 SLURP2P0DP57 97 aa21.68■■□□□ 1.06
SOX2-201ENST00000325404 NIM1KQ8IY84 436 aa21.68■■□□□ 1.06
SOX2-201ENST00000325404 MKNK1Q9BUB5 465 aa21.68■■□□□ 1.06
SOX2-201ENST00000325404 TMOD2Q9NZR1 351 aa21.68■■□□□ 1.06
SOX2-201ENST00000325404 SIPA1L1O43166 1804 aa21.68■■□□□ 1.06
SOX2-201ENST00000325404 FAM86B1E9PN63 330 aa21.68■■□□□ 1.06
SOX2-201ENST00000325404 FAM86B2P0C5J1 330 aa21.68■■□□□ 1.06
SOX2-201ENST00000325404 B4GALNT4Q76KP1 1039 aa21.68■■□□□ 1.06
SOX2-201ENST00000325404 LRRC45Q96CN5 670 aa21.68■■□□□ 1.06
SOX2-201ENST00000325404 ATP6V1G3Q96LB4 118 aa21.68■■□□□ 1.06
SOX2-201ENST00000325404 GMLQ99445 158 aa21.68■■□□□ 1.06
SOX2-201ENST00000325404 PLEKHA4Q9H4M7 779 aa21.68■■□□□ 1.06
SOX2-201ENST00000325404 TTC7AQ9ULT0 858 aaPredicted RBP21.68■■□□□ 1.06
SOX2-201ENST00000325404 UBE4BO95155 1302 aa21.68■■□□□ 1.06
SOX2-201ENST00000325404 ESYT3A0FGR9 886 aa21.67■■□□□ 1.06
SOX2-201ENST00000325404 ZSCAN5CA6NGD5 496 aaPredicted RBP21.67■■□□□ 1.06
SOX2-201ENST00000325404 FAM196BA6NMK8 535 aa21.67■■□□□ 1.06
SOX2-201ENST00000325404 MSH4O15457 936 aa21.67■■□□□ 1.06
SOX2-201ENST00000325404 TRAF1Q13077 416 aa21.67■■□□□ 1.06
SOX2-201ENST00000325404 OGFOD1Q8N543 542 aa21.67■■□□□ 1.06
SOX2-201ENST00000325404 PAGR1Q9BTK6 254 aa21.67■■□□□ 1.06
SOX2-201ENST00000325404 SLITRK6Q9H5Y7 841 aa21.67■■□□□ 1.06
SOX2-201ENST00000325404 ZNRF3Q9ULT6 936 aa21.67■■□□□ 1.06
SOX2-201ENST00000325404 COL4A5P29400 1685 aa21.67■■□□□ 1.06
SOX2-201ENST00000325404 ATRNL1Q5VV63 1379 aa21.67■■□□□ 1.06
SOX2-201ENST00000325404 KRT14P02533 472 aa21.67■■□□□ 1.06
SOX2-201ENST00000325404 MUTP22033 750 aa21.67■■□□□ 1.06
SOX2-201ENST00000325404 NOP2P46087 812 aaKnown RBP21.67■■□□□ 1.06
SOX2-201ENST00000325404 DALRD3Q5D0E6 543 aaKnown RBP21.67■■□□□ 1.06
SOX2-201ENST00000325404 SYDE2Q5VT97 1194 aa21.67■■□□□ 1.06
SOX2-201ENST00000325404 TUFT1Q9NNX1 390 aa21.67■■□□□ 1.06
SOX2-201ENST00000325404 RABGAP1Q9Y3P9 1069 aa21.67■■□□□ 1.06
SOX2-201ENST00000325404 SPDYE2BA6NHP3 402 aa21.66■■□□□ 1.06
SOX2-201ENST00000325404 F5H6K3 240 aa21.66■■□□□ 1.06
SOX2-201ENST00000325404 SPDYE6P0CI01 402 aa21.66■■□□□ 1.06
SOX2-201ENST00000325404 STAT1P42224 750 aa21.66■■□□□ 1.06
SOX2-201ENST00000325404 ICA1Q05084 483 aa21.66■■□□□ 1.06
SOX2-201ENST00000325404 KLRC3Q07444 240 aa21.66■■□□□ 1.06
SOX2-201ENST00000325404 ENOX2Q16206 610 aaKnown RBP21.66■■□□□ 1.06
SOX2-201ENST00000325404 TTC31Q49AM3 519 aaPredicted RBP21.66■■□□□ 1.06
SOX2-201ENST00000325404 TADA2BQ86TJ2 420 aa21.66■■□□□ 1.06
SOX2-201ENST00000325404 DIS3Q9Y2L1 958 aaKnown RBP21.66■■□□□ 1.06
SOX2-201ENST00000325404 MEIS1O00470 390 aa21.66■■□□□ 1.06
SOX2-201ENST00000325404 PPP1R12BO60237 982 aaPredicted RBP21.66■■□□□ 1.06
SOX2-201ENST00000325404 CEP104O60308 925 aa21.66■■□□□ 1.06
SOX2-201ENST00000325404 ERVK-9P63128 1117 aa21.66■■□□□ 1.06
SOX2-201ENST00000325404 EIF2AK1Q9BQI3 630 aaKnown RBP21.66■■□□□ 1.06
SOX2-201ENST00000325404 BHMT2Q9H2M3 363 aa21.66■■□□□ 1.06
SOX2-201ENST00000325404 GCNT4Q9P109 453 aa21.66■■□□□ 1.06
SOX2-201ENST00000325404 FAM169AQ9Y6X4 670 aa21.66■■□□□ 1.06
SOX2-201ENST00000325404 GOLGB1Q14789 3259 aaKnown RBP21.66■■□□□ 1.06
SOX2-201ENST00000325404 ECHS1P30084 290 aa21.65■■□□□ 1.06
SOX2-201ENST00000325404 PSMC2P35998 433 aaKnown RBP21.65■■□□□ 1.06
SOX2-201ENST00000325404 DNA2P51530 1060 aa21.65■■□□□ 1.06
SOX2-201ENST00000325404 DLGAP5Q15398 846 aa21.65■■□□□ 1.06
SOX2-201ENST00000325404 DCAF17Q5H9S7 520 aaPredicted RBP21.65■■□□□ 1.06
SOX2-201ENST00000325404 METTL13Q8N6R0 699 aa21.65■■□□□ 1.06
SOX2-201ENST00000325404 SLC30A5Q8TAD4 765 aa21.65■■□□□ 1.06
SOX2-201ENST00000325404 SEC14L1Q92503 715 aa21.65■■□□□ 1.06
SOX2-201ENST00000325404 RUSC1Q9BVN2 902 aa21.65■■□□□ 1.06
SOX2-201ENST00000325404 SEL1LQ9UBV2 794 aa21.65■■□□□ 1.06
SOX2-201ENST00000325404 COL2A1P02458 1487 aaPredicted RBP21.65■■□□□ 1.06
SOX2-201ENST00000325404 NR1D1P20393 614 aa21.65■■□□□ 1.06
SOX2-201ENST00000325404 GUCY2FP51841 1108 aa21.65■■□□□ 1.06
SOX2-201ENST00000325404 RINT1Q6NUQ1 792 aa21.65■■□□□ 1.06
SOX2-201ENST00000325404 PEX26Q7Z412 305 aa21.65■■□□□ 1.06
SOX2-201ENST00000325404 KLHL7Q8IXQ5 586 aa21.65■■□□□ 1.06
SOX2-201ENST00000325404 ZFP91Q96JP5 570 aaPredicted RBP21.65■■□□□ 1.06
SOX2-201ENST00000325404 HSD17B14Q9BPX1 270 aa21.65■■□□□ 1.06
SOX2-201ENST00000325404 TMBIM4Q9HC24 238 aa21.65■■□□□ 1.06
SOX2-201ENST00000325404 DDX3XO00571 662 aaKnown RBP eCLIP21.64■■□□□ 1.06
SOX2-201ENST00000325404 TGFB1I1O43294 461 aa21.64■■□□□ 1.06
SOX2-201ENST00000325404 GCNT3O95395 438 aa21.64■■□□□ 1.06
SOX2-201ENST00000325404 LMNB1P20700 586 aa21.64■■□□□ 1.06
SOX2-201ENST00000325404 ARFGAP2Q8N6H7 521 aa21.64■■□□□ 1.06
SOX2-201ENST00000325404 HES6Q96HZ4 224 aa21.64■■□□□ 1.06
SOX2-201ENST00000325404 UIMC1Q96RL1 719 aa21.64■■□□□ 1.06
SOX2-201ENST00000325404 STK33Q9BYT3 514 aa21.64■■□□□ 1.06
SOX2-201ENST00000325404 EPN3Q9H201 632 aa21.64■■□□□ 1.06
SOX2-201ENST00000325404 ZBTB12Q9Y330 459 aaPredicted RBP21.64■■□□□ 1.06
SOX2-201ENST00000325404 NCANO14594 1321 aa21.64■■□□□ 1.06
SOX2-201ENST00000325404 SART1O43290 800 aaKnown RBP21.64■■□□□ 1.05
SOX2-201ENST00000325404 MTMR3Q13615 1198 aa21.64■■□□□ 1.05
SOX2-201ENST00000325404 MAATS1Q7Z4T9 603 aa21.64■■□□□ 1.05
SOX2-201ENST00000325404 NOC2LQ9Y3T9 749 aaKnown RBP21.64■■□□□ 1.05
SOX2-201ENST00000325404 NDUFB10O96000 172 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms