RNA–Protein interactions for RNA: ENST00000323853.9

SNRNP200-201, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP200, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-201ENST00000323853 NUB1Q9Y5A7 615 aa11.72□□□□□ -0.53
SNRNP200-201ENST00000323853 OVOS2A0A0G2JMS6 1433 aa11.71□□□□□ -0.53
SNRNP200-201ENST00000323853 OVOS2A0A0J9YW53 1432 aa11.71□□□□□ -0.53
SNRNP200-201ENST00000323853 OVOS2Q6IE36 1432 aa11.71□□□□□ -0.53
SNRNP200-201ENST00000323853 WDR91A4D1P6 747 aa11.71□□□□□ -0.53
SNRNP200-201ENST00000323853 PADI6Q6TGC4 694 aa11.71□□□□□ -0.53
SNRNP200-201ENST00000323853 SIX6OS1Q8N1H7 587 aa11.71□□□□□ -0.53
SNRNP200-201ENST00000323853 BBS5Q8N3I7 341 aa11.71□□□□□ -0.53
SNRNP200-201ENST00000323853 FAF2Q96CS3 445 aa11.71□□□□□ -0.53
SNRNP200-201ENST00000323853 TRIM4Q9C037 500 aa11.71□□□□□ -0.53
SNRNP200-201ENST00000323853 DNAJC17Q9NVM6 304 aaKnown RBP11.71□□□□□ -0.53
SNRNP200-201ENST00000323853 MAPK13O15264 365 aa11.71□□□□□ -0.53
SNRNP200-201ENST00000323853 MMEP08473 750 aa11.71□□□□□ -0.53
SNRNP200-201ENST00000323853 SRGAP2CP0DJJ0 459 aa11.71□□□□□ -0.53
SNRNP200-201ENST00000323853 PMS2P54278 862 aa11.71□□□□□ -0.53
SNRNP200-201ENST00000323853 RBM41Q96IZ5 413 aaKnown RBP11.71□□□□□ -0.53
SNRNP200-201ENST00000323853 CNOT8Q9UFF9 292 aaKnown RBP11.71□□□□□ -0.53
SNRNP200-201ENST00000323853 A0A1W2PQC6 194 aa11.71□□□□□ -0.53
SNRNP200-201ENST00000323853 HNRNPH2P55795 449 aaKnown RBP11.71□□□□□ -0.53
SNRNP200-201ENST00000323853 BBS9Q3SYG4 887 aa11.71□□□□□ -0.53
SNRNP200-201ENST00000323853 KCNF1Q9H3M0 494 aa11.71□□□□□ -0.53
SNRNP200-201ENST00000323853 ANAPC7Q9UJX3 599 aa11.71□□□□□ -0.53
SNRNP200-201ENST00000323853 PP2D1A8MPX8 630 aa11.71□□□□□ -0.54
SNRNP200-201ENST00000323853 USP17L15C9J2P7 530 aa11.71□□□□□ -0.54
SNRNP200-201ENST00000323853 USP17L13C9JLJ4 530 aa11.71□□□□□ -0.54
SNRNP200-201ENST00000323853 USP17L11C9JVI0 530 aa11.71□□□□□ -0.54
SNRNP200-201ENST00000323853 USP17L18D6R9N7 530 aa11.71□□□□□ -0.54
SNRNP200-201ENST00000323853 USP17L22D6RA61 530 aa11.71□□□□□ -0.54
SNRNP200-201ENST00000323853 USP17L17D6RBQ6 530 aa11.71□□□□□ -0.54
SNRNP200-201ENST00000323853 USP17L19D6RCP7 530 aa11.71□□□□□ -0.54
SNRNP200-201ENST00000323853 USP17L20D6RJB6 530 aa11.71□□□□□ -0.54
SNRNP200-201ENST00000323853 MAP3K7O43318 606 aa11.71□□□□□ -0.54
SNRNP200-201ENST00000323853 GPSM2P81274 684 aa11.71□□□□□ -0.54
SNRNP200-201ENST00000323853 USP17L24Q0WX57 530 aa11.71□□□□□ -0.54
SNRNP200-201ENST00000323853 USP17L6PQ6QN14 398 aa11.71□□□□□ -0.54
SNRNP200-201ENST00000323853 METTL16Q86W50 562 aaKnown RBP11.71□□□□□ -0.54
SNRNP200-201ENST00000323853 PDCD7Q8N8D1 485 aaKnown RBP11.71□□□□□ -0.54
SNRNP200-201ENST00000323853 TLK1Q9UKI8 766 aa11.71□□□□□ -0.54
SNRNP200-201ENST00000323853 ANGPTL2Q9UKU9 493 aa11.71□□□□□ -0.54
SNRNP200-201ENST00000323853 TPX2Q9ULW0 747 aaKnown RBP11.71□□□□□ -0.54
SNRNP200-201ENST00000323853 IPO5O00410 1097 aaKnown RBP11.71□□□□□ -0.54
SNRNP200-201ENST00000323853 ECE2O60344 883 aa11.71□□□□□ -0.54
SNRNP200-201ENST00000323853 ZBED1O96006 694 aa11.71□□□□□ -0.54
SNRNP200-201ENST00000323853 GUCY1A2P33402 732 aa11.71□□□□□ -0.54
SNRNP200-201ENST00000323853 STAT3P40763 770 aa11.71□□□□□ -0.54
SNRNP200-201ENST00000323853 HDLBPQ00341 1268 aaKnown RBP11.71□□□□□ -0.54
SNRNP200-201ENST00000323853 PDXDC1Q6P996 788 aa11.71□□□□□ -0.54
SNRNP200-201ENST00000323853 C7orf31Q8N865 590 aa11.71□□□□□ -0.54
SNRNP200-201ENST00000323853 CD209Q9NNX6 404 aa11.71□□□□□ -0.54
SNRNP200-201ENST00000323853 ABCA9Q8IUA7 1624 aa11.71□□□□□ -0.54
SNRNP200-201ENST00000323853 MARK3P27448 753 aa11.71□□□□□ -0.54
SNRNP200-201ENST00000323853 CASP2P42575 452 aa11.71□□□□□ -0.54
SNRNP200-201ENST00000323853 CAV1Q03135 178 aa11.71□□□□□ -0.54
SNRNP200-201ENST00000323853 CELF1Q92879 486 aaKnown RBP11.71□□□□□ -0.54
SNRNP200-201ENST00000323853 NUP85Q9BW27 656 aa11.71□□□□□ -0.54
SNRNP200-201ENST00000323853 PLA2G12BQ9BX93 195 aa11.71□□□□□ -0.54
SNRNP200-201ENST00000323853 KIAA1586Q9HCI6 787 aa11.71□□□□□ -0.54
SNRNP200-201ENST00000323853 HDAC6Q9UBN7 1215 aa11.71□□□□□ -0.54
SNRNP200-201ENST00000323853 K7ERI5 159 aa11.7□□□□□ -0.54
SNRNP200-201ENST00000323853 CLGNO14967 610 aa11.7□□□□□ -0.54
SNRNP200-201ENST00000323853 KRT39Q6A163 491 aa11.7□□□□□ -0.54
SNRNP200-201ENST00000323853 CAPN11Q9UMQ6 739 aa11.7□□□□□ -0.54
SNRNP200-201ENST00000323853 SNX24Q9Y343 169 aa11.7□□□□□ -0.54
SNRNP200-201ENST00000323853 RABL6Q3YEC7 729 aaPredicted RBP11.7□□□□□ -0.54
SNRNP200-201ENST00000323853 EEPD1Q7L9B9 569 aa11.7□□□□□ -0.54
SNRNP200-201ENST00000323853 SLC44A5Q8NCS7 719 aa11.7□□□□□ -0.54
SNRNP200-201ENST00000323853 THEGQ9P2T0 379 aa11.7□□□□□ -0.54
SNRNP200-201ENST00000323853 CACNB3P54284 484 aa11.7□□□□□ -0.54
SNRNP200-201ENST00000323853 MAML1Q92585 1016 aa11.7□□□□□ -0.54
SNRNP200-201ENST00000323853 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.7□□□□□ -0.541e-8■■□□□ 12.9
SNRNP200-201ENST00000323853 SLC12A6Q9UHW9 1150 aa11.7□□□□□ -0.54
SNRNP200-201ENST00000323853 ANGPTL3Q9Y5C1 460 aa11.7□□□□□ -0.54
SNRNP200-201ENST00000323853 ATP1A1P05023 1023 aaKnown RBP11.7□□□□□ -0.54
SNRNP200-201ENST00000323853 VAMP7P51809 220 aa11.7□□□□□ -0.54
SNRNP200-201ENST00000323853 CIAPIN1Q6FI81 312 aa11.7□□□□□ -0.54
SNRNP200-201ENST00000323853 XXYLT1Q8NBI6 393 aa11.7□□□□□ -0.54
SNRNP200-201ENST00000323853 ZNF564Q8TBZ8 553 aaPredicted RBP11.7□□□□□ -0.54
SNRNP200-201ENST00000323853 LRRC4Q9HBW1 653 aa11.7□□□□□ -0.54
SNRNP200-201ENST00000323853 SNAP23O00161 211 aa11.7□□□□□ -0.54
SNRNP200-201ENST00000323853 SLC16A4O15374 487 aa11.7□□□□□ -0.54
SNRNP200-201ENST00000323853 DCTN3O75935 186 aa11.7□□□□□ -0.54
SNRNP200-201ENST00000323853 PDE1CQ14123 709 aaPredicted RBP11.7□□□□□ -0.54
SNRNP200-201ENST00000323853 NAALADL2Q58DX5 795 aa11.7□□□□□ -0.54
SNRNP200-201ENST00000323853 PDZD8Q8NEN9 1154 aa11.7□□□□□ -0.54
SNRNP200-201ENST00000323853 PRPF31Q8WWY3 499 aaKnown RBP11.7□□□□□ -0.54
SNRNP200-201ENST00000323853 RUBCNQ92622 972 aa11.7□□□□□ -0.54
SNRNP200-201ENST00000323853 PHF20Q9BVI0 1012 aa11.7□□□□□ -0.54
SNRNP200-201ENST00000323853 TTC26A0AVF1 554 aa11.69□□□□□ -0.54
SNRNP200-201ENST00000323853 MYBL1P10243 752 aa11.69□□□□□ -0.54
SNRNP200-201ENST00000323853 GCLMP48507 274 aa11.69□□□□□ -0.54
SNRNP200-201ENST00000323853 ARL4CP56559 192 aa11.69□□□□□ -0.54
SNRNP200-201ENST00000323853 PDCLQ13371 301 aa11.69□□□□□ -0.54
SNRNP200-201ENST00000323853 TAF11Q15544 211 aa11.69□□□□□ -0.54
SNRNP200-201ENST00000323853 CDO1Q16878 200 aa11.69□□□□□ -0.54
SNRNP200-201ENST00000323853 SPDL1Q96EA4 605 aa11.69□□□□□ -0.54
SNRNP200-201ENST00000323853 MTRQ99707 1265 aa11.69□□□□□ -0.54
SNRNP200-201ENST00000323853 RAVER2Q9HCJ3 691 aaKnown RBP11.69□□□□□ -0.54
SNRNP200-201ENST00000323853 TBC1D22BQ9NU19 505 aa11.69□□□□□ -0.54
SNRNP200-201ENST00000323853 LIMA1Q9UHB6 759 aaKnown RBP11.69□□□□□ -0.54
SNRNP200-201ENST00000323853 POTEFA5A3E0 1075 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms