RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 MDH1P40925 334 aaKnown RBP16.49■□□□□ 0.23
VARS2-201ENST00000321897 ECE1P42892 770 aa16.49■□□□□ 0.23
VARS2-201ENST00000321897 MTM1Q13496 603 aa16.49■□□□□ 0.23
VARS2-201ENST00000321897 CCDC13Q8IYE1 715 aa16.49■□□□□ 0.23
VARS2-201ENST00000321897 EPN3Q9H201 632 aa16.49■□□□□ 0.23
VARS2-201ENST00000321897 DHX36Q9H2U1 1008 aaKnown RBP16.49■□□□□ 0.23
VARS2-201ENST00000321897 MON2Q7Z3U7 1717 aa16.49■□□□□ 0.23
VARS2-201ENST00000321897 SPATA31A5Q5VU36 1347 aa16.49■□□□□ 0.23
VARS2-201ENST00000321897 SPATA31A7Q8IWB4 1347 aa16.49■□□□□ 0.23
VARS2-201ENST00000321897 MYL1P05976 194 aa16.49■□□□□ 0.23
VARS2-201ENST00000321897 PAX7P23759 505 aa16.49■□□□□ 0.23
VARS2-201ENST00000321897 SARSP49591 514 aaKnown RBP16.49■□□□□ 0.23
VARS2-201ENST00000321897 IGBP1P78318 339 aa16.49■□□□□ 0.23
VARS2-201ENST00000321897 GRB10Q13322 594 aa16.49■□□□□ 0.23
VARS2-201ENST00000321897 TAOK1Q7L7X3 1001 aa16.49■□□□□ 0.23
VARS2-201ENST00000321897 PASD1Q8IV76 773 aa16.49■□□□□ 0.23
VARS2-201ENST00000321897 MCUR1Q96AQ8 359 aa16.49■□□□□ 0.23
VARS2-201ENST00000321897 REEP2Q9BRK0 252 aa16.49■□□□□ 0.23
VARS2-201ENST00000321897 SLC16A4O15374 487 aa16.49■□□□□ 0.23
VARS2-201ENST00000321897 KRT15P19012 456 aa16.49■□□□□ 0.23
VARS2-201ENST00000321897 ALDH3A1P30838 453 aa16.49■□□□□ 0.23
VARS2-201ENST00000321897 TTI2Q6NXR4 508 aa16.49■□□□□ 0.23
VARS2-201ENST00000321897 C16orf86Q6ZW13 317 aa16.49■□□□□ 0.23
VARS2-201ENST00000321897 METTL13Q8N6R0 699 aa16.49■□□□□ 0.23
VARS2-201ENST00000321897 CEP170P1Q96L14 293 aa16.49■□□□□ 0.23
VARS2-201ENST00000321897 METTL14Q9HCE5 456 aaKnown RBP16.49■□□□□ 0.23
VARS2-201ENST00000321897 SEPT9Q9UHD8 586 aaPredicted RBP16.49■□□□□ 0.23
VARS2-201ENST00000321897 USH1CQ9Y6N9 552 aa16.49■□□□□ 0.23
VARS2-201ENST00000321897 PALM3A6NDB9 673 aaPredicted RBP16.48■□□□□ 0.23
VARS2-201ENST00000321897 DIAPH2O60879 1101 aa16.48■□□□□ 0.23
VARS2-201ENST00000321897 FOSP01100 380 aaPredicted RBP16.48■□□□□ 0.23
VARS2-201ENST00000321897 MTERF2Q49AM1 385 aa16.48■□□□□ 0.23
VARS2-201ENST00000321897 CYP4F22Q6NT55 531 aa16.48■□□□□ 0.23
VARS2-201ENST00000321897 FAM47EQ6ZV65 393 aa16.48■□□□□ 0.23
VARS2-201ENST00000321897 MDM1Q8TC05 714 aa16.48■□□□□ 0.23
VARS2-201ENST00000321897 ZNF653Q96CK0 615 aa16.48■□□□□ 0.23
VARS2-201ENST00000321897 DDX4Q9NQI0 724 aaKnown RBP16.48■□□□□ 0.23
VARS2-201ENST00000321897 FBXL5Q9UKA1 691 aa16.48■□□□□ 0.23
VARS2-201ENST00000321897 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.48■□□□□ 0.23
VARS2-201ENST00000321897 ANO9A1A5B4 782 aa16.48■□□□□ 0.23
VARS2-201ENST00000321897 C6orf163Q5TEZ5 329 aa16.48■□□□□ 0.23
VARS2-201ENST00000321897 CDKAL1Q5VV42 579 aa16.48■□□□□ 0.23
VARS2-201ENST00000321897 HEMGNQ9BXL5 484 aa16.48■□□□□ 0.23
VARS2-201ENST00000321897 RAB21Q9UL25 225 aa16.48■□□□□ 0.23
VARS2-201ENST00000321897 AGTPBP1Q9UPW5 1226 aa16.48■□□□□ 0.23
VARS2-201ENST00000321897 NRXN3Q9Y4C0 1643 aa16.48■□□□□ 0.23
VARS2-201ENST00000321897 LRRD1A4D1F6 860 aa16.48■□□□□ 0.23
VARS2-201ENST00000321897 TXNDC9O14530 226 aa16.48■□□□□ 0.23
VARS2-201ENST00000321897 ZBED4O75132 1171 aa16.48■□□□□ 0.23
VARS2-201ENST00000321897 NPR1P16066 1061 aa16.48■□□□□ 0.23
VARS2-201ENST00000321897 PSMC6P62333 389 aa16.48■□□□□ 0.23
VARS2-201ENST00000321897 STRN3Q13033 797 aa16.48■□□□□ 0.23
VARS2-201ENST00000321897 KCNB1Q14721 858 aa16.48■□□□□ 0.23
VARS2-201ENST00000321897 KIF2BQ8N4N8 673 aa16.48■□□□□ 0.23
VARS2-201ENST00000321897 HOMER3Q9NSC5 361 aa16.48■□□□□ 0.23
VARS2-201ENST00000321897 INTUQ9ULD6 942 aa16.48■□□□□ 0.23
VARS2-201ENST00000321897 PGRMC1O00264 195 aaKnown RBP16.47■□□□□ 0.23
VARS2-201ENST00000321897 ZBTB39O15060 712 aa16.47■□□□□ 0.23
VARS2-201ENST00000321897 DAPK3O43293 454 aa16.47■□□□□ 0.23
VARS2-201ENST00000321897 CD58P19256 250 aa16.47■□□□□ 0.23
VARS2-201ENST00000321897 CASP4P49662 377 aa16.47■□□□□ 0.23
VARS2-201ENST00000321897 SEPT14Q6ZU15 432 aa16.47■□□□□ 0.23
VARS2-201ENST00000321897 TMEM179Q6ZVK1 233 aa16.47■□□□□ 0.23
VARS2-201ENST00000321897 WHAMMQ8TF30 809 aa16.47■□□□□ 0.23
VARS2-201ENST00000321897 HAUS1Q96CS2 278 aa16.47■□□□□ 0.23
VARS2-201ENST00000321897 EIF2AK1Q9BQI3 630 aaKnown RBP16.47■□□□□ 0.23
VARS2-201ENST00000321897 RAB17Q9H0T7 212 aa16.47■□□□□ 0.23
VARS2-201ENST00000321897 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.47■□□□□ 0.232e-6■■■■■ 26.8
VARS2-201ENST00000321897 LIG4P49917 911 aa16.47■□□□□ 0.23
VARS2-201ENST00000321897 KNOP1Q1ED39 458 aaKnown RBP16.47■□□□□ 0.23
VARS2-201ENST00000321897 RASIP1Q5U651 963 aa16.47■□□□□ 0.23
VARS2-201ENST00000321897 VPS52Q8N1B4 723 aa16.47■□□□□ 0.23
VARS2-201ENST00000321897 ACER1Q8TDN7 264 aa16.47■□□□□ 0.23
VARS2-201ENST00000321897 RTFDC1Q9BY42 306 aaPredicted RBP16.47■□□□□ 0.23
VARS2-201ENST00000321897 IKBKGQ9Y6K9 419 aa16.47■□□□□ 0.23
VARS2-201ENST00000321897 A0A087X0T9 212 aa16.47■□□□□ 0.23
VARS2-201ENST00000321897 PVALEFA0A1B0GWK0 134 aa16.47■□□□□ 0.23
VARS2-201ENST00000321897 FAM228BP0C875 321 aa16.47■□□□□ 0.23
VARS2-201ENST00000321897 MARK3P27448 753 aa16.47■□□□□ 0.23
VARS2-201ENST00000321897 DRAP1Q14919 205 aaPredicted RBP16.47■□□□□ 0.23
VARS2-201ENST00000321897 EPC2Q52LR7 807 aa16.47■□□□□ 0.23
VARS2-201ENST00000321897 C2CD6Q53TS8 623 aa16.47■□□□□ 0.23
VARS2-201ENST00000321897 KIAA0895Q8NCT3 520 aa16.47■□□□□ 0.23
VARS2-201ENST00000321897 CYFIP2Q96F07 1278 aa16.47■□□□□ 0.23
VARS2-201ENST00000321897 FMO2Q99518 471 aa16.47■□□□□ 0.23
VARS2-201ENST00000321897 CYFIP1Q7L576 1253 aa16.46■□□□□ 0.23
VARS2-201ENST00000321897 SYCE1Q8N0S2 351 aa16.46■□□□□ 0.23
VARS2-201ENST00000321897 MTRQ99707 1265 aa16.46■□□□□ 0.23
VARS2-201ENST00000321897 FAM118BQ9BPY3 351 aa16.46■□□□□ 0.23
VARS2-201ENST00000321897 DAAM1Q9Y4D1 1078 aa16.46■□□□□ 0.23
VARS2-201ENST00000321897 GPR75-ASB3A0A0A6YYF3 556 aa16.46■□□□□ 0.23
VARS2-201ENST00000321897 TARSL2A2RTX5 802 aaKnown RBP16.46■□□□□ 0.23
VARS2-201ENST00000321897 DDTLA6NHG4 134 aaPredicted RBP16.46■□□□□ 0.23
VARS2-201ENST00000321897 NOP56O00567 594 aaKnown RBP16.46■□□□□ 0.23
VARS2-201ENST00000321897 KIF1CO43896 1103 aaKnown RBP16.46■□□□□ 0.23
VARS2-201ENST00000321897 SUN1O94901 812 aa16.46■□□□□ 0.23
VARS2-201ENST00000321897 ADCY8P40145 1251 aa16.46■□□□□ 0.23
VARS2-201ENST00000321897 MXI1P50539 228 aa16.46■□□□□ 0.23
VARS2-201ENST00000321897 CAPRIN2Q6IMN6 1127 aaKnown RBP16.46■□□□□ 0.23
VARS2-201ENST00000321897 ANKRD35Q8N283 1001 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms