RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 U2AF1L4Q8WU68 220 aaKnown RBP20.78■□□□□ 0.92
RTN4-201ENST00000317610 TATDN2Q93075 761 aa20.78■□□□□ 0.92
RTN4-201ENST00000317610 OSBPL7Q9BZF2 842 aa20.78■□□□□ 0.92
RTN4-201ENST00000317610 KLC4Q9NSK0 619 aa20.78■□□□□ 0.92
RTN4-201ENST00000317610 STK24Q9Y6E0 443 aa20.78■□□□□ 0.92
RTN4-201ENST00000317610 DDX3YO15523 660 aaKnown RBP20.77■□□□□ 0.92
RTN4-201ENST00000317610 STAT1P42224 750 aa20.77■□□□□ 0.92
RTN4-201ENST00000317610 CASP4P49662 377 aa20.77■□□□□ 0.92
RTN4-201ENST00000317610 PPATQ06203 517 aa20.77■□□□□ 0.92
RTN4-201ENST00000317610 CRY2Q49AN0 593 aa20.77■□□□□ 0.92
RTN4-201ENST00000317610 SEC16BQ96JE7 1060 aa20.77■□□□□ 0.92
RTN4-201ENST00000317610 CELF4Q9BZC1 486 aaKnown RBP20.77■□□□□ 0.92
RTN4-201ENST00000317610 CNOT10Q9H9A5 744 aaKnown RBP20.77■□□□□ 0.92
RTN4-201ENST00000317610 BCCIPQ9P287 314 aaKnown RBP eCLIP20.77■□□□□ 0.92
RTN4-201ENST00000317610 TMEM253P0C7T8 217 aa20.77■□□□□ 0.92
RTN4-201ENST00000317610 PTENP60484 403 aa20.77■□□□□ 0.92
RTN4-201ENST00000317610 MAGOHP61326 146 aaKnown RBP20.77■□□□□ 0.92
RTN4-201ENST00000317610 PPP2R5EQ16537 467 aa20.77■□□□□ 0.92
RTN4-201ENST00000317610 ODF2Q5BJF6 829 aa20.77■□□□□ 0.92
RTN4-201ENST00000317610 GJB7Q6PEY0 223 aa20.77■□□□□ 0.92
RTN4-201ENST00000317610 RFFLQ8WZ73 363 aa20.77■□□□□ 0.92
RTN4-201ENST00000317610 RPGRQ92834 1020 aaKnown RBP20.77■□□□□ 0.92
RTN4-201ENST00000317610 MAGOHBQ96A72 148 aaKnown RBP20.77■□□□□ 0.92
RTN4-201ENST00000317610 CENPTQ96BT3 561 aa20.77■□□□□ 0.92
RTN4-201ENST00000317610 SYT11Q9BT88 431 aa20.77■□□□□ 0.92
RTN4-201ENST00000317610 SLC40A1Q9NP59 571 aa20.77■□□□□ 0.92
RTN4-201ENST00000317610 DCDC2CA8MYV0 355 aa20.76■□□□□ 0.91
RTN4-201ENST00000317610 MEIS2O14770 477 aa20.76■□□□□ 0.91
RTN4-201ENST00000317610 CHUKO15111 745 aa20.76■□□□□ 0.91
RTN4-201ENST00000317610 BUB1BO60566 1050 aaPredicted RBP20.76■□□□□ 0.91
RTN4-201ENST00000317610 LMNB1P20700 586 aa20.76■□□□□ 0.91
RTN4-201ENST00000317610 LACTB2Q53H82 288 aaPredicted RBP20.76■□□□□ 0.91
RTN4-201ENST00000317610 TCERG1LQ5VWI1 586 aa20.76■□□□□ 0.91
RTN4-201ENST00000317610 LENG9Q96B70 501 aa20.76■□□□□ 0.91
RTN4-201ENST00000317610 PSMD1Q99460 953 aa20.76■□□□□ 0.91
RTN4-201ENST00000317610 RAB17Q9H0T7 212 aa20.76■□□□□ 0.91
RTN4-201ENST00000317610 PCDHA1Q9Y5I3 950 aa20.76■□□□□ 0.91
RTN4-201ENST00000317610 FGGP02679 453 aa20.76■□□□□ 0.91
RTN4-201ENST00000317610 ARHGAP4P98171 946 aa20.76■□□□□ 0.91
RTN4-201ENST00000317610 PDE4CQ08493 712 aa20.76■□□□□ 0.91
RTN4-201ENST00000317610 NFIL3Q16649 462 aa20.76■□□□□ 0.91
RTN4-201ENST00000317610 KRT71Q3SY84 523 aa20.76■□□□□ 0.91
RTN4-201ENST00000317610 ANKRD20A8PQ5CZ79 823 aa20.76■□□□□ 0.91
RTN4-201ENST00000317610 P3H4Q92791 437 aa20.76■□□□□ 0.91
RTN4-201ENST00000317610 LTBP1Q14766 1721 aa20.75■□□□□ 0.91
RTN4-201ENST00000317610 MEIS1O00470 390 aa20.75■□□□□ 0.91
RTN4-201ENST00000317610 EVI5O60447 810 aa20.75■□□□□ 0.91
RTN4-201ENST00000317610 SOX5P35711 763 aa20.75■□□□□ 0.91
RTN4-201ENST00000317610 DCAF12L1Q5VU92 463 aa20.75■□□□□ 0.91
RTN4-201ENST00000317610 CACNA2D3Q8IZS8 1091 aa20.75■□□□□ 0.91
RTN4-201ENST00000317610 TBC1D16Q8TBP0 767 aa20.75■□□□□ 0.91
RTN4-201ENST00000317610 FMO2Q99518 471 aa20.75■□□□□ 0.91
RTN4-201ENST00000317610 P2RX7Q99572 595 aaKnown RBP20.75■□□□□ 0.91
RTN4-201ENST00000317610 CARD9Q9H257 536 aa20.75■□□□□ 0.91
RTN4-201ENST00000317610 DPH5Q9H2P9 285 aa20.75■□□□□ 0.91
RTN4-201ENST00000317610 POLLQ9UGP5 575 aa20.75■□□□□ 0.91
RTN4-201ENST00000317610 CCNL1Q9UK58 526 aaPredicted RBP20.75■□□□□ 0.91
RTN4-201ENST00000317610 GOLGA6L7A0A1B0GV03 622 aa20.75■□□□□ 0.91
RTN4-201ENST00000317610 DUPD1Q68J44 220 aa20.75■□□□□ 0.91
RTN4-201ENST00000317610 PRR5LQ6MZQ0 368 aa20.75■□□□□ 0.91
RTN4-201ENST00000317610 TAX1BP1Q86VP1 789 aa20.75■□□□□ 0.91
RTN4-201ENST00000317610 SLC35G2Q8TBE7 412 aa20.75■□□□□ 0.91
RTN4-201ENST00000317610 STK33Q9BYT3 514 aa20.75■□□□□ 0.91
RTN4-201ENST00000317610 OSGEPQ9NPF4 335 aa20.75■□□□□ 0.91
RTN4-201ENST00000317610 OLFML3Q9NRN5 406 aa20.75■□□□□ 0.91
RTN4-201ENST00000317610 ZDHHC18Q9NUE0 388 aa20.75■□□□□ 0.91
RTN4-201ENST00000317610 SUGT1Q9Y2Z0 365 aa20.75■□□□□ 0.91
RTN4-201ENST00000317610 NR2E1Q9Y466 385 aa20.75■□□□□ 0.91
RTN4-201ENST00000317610 RSPH10B2B2RC85 870 aa20.74■□□□□ 0.91
RTN4-201ENST00000317610 DNM1LO00429 736 aa20.74■□□□□ 0.91
RTN4-201ENST00000317610 TGFB1I1O43294 461 aa20.74■□□□□ 0.91
RTN4-201ENST00000317610 NUDT17P0C025 328 aa20.74■□□□□ 0.91
RTN4-201ENST00000317610 RSPH10BP0C881 870 aa20.74■□□□□ 0.91
RTN4-201ENST00000317610 DRD4P21917 467 aa20.74■□□□□ 0.91
RTN4-201ENST00000317610 PLS1Q14651 629 aa20.74■□□□□ 0.91
RTN4-201ENST00000317610 PRR16Q569H4 304 aa20.74■□□□□ 0.91
RTN4-201ENST00000317610 RPAINQ86UA6 219 aa20.74■□□□□ 0.91
RTN4-201ENST00000317610 FAM20AQ96MK3 541 aa20.74■□□□□ 0.91
RTN4-201ENST00000317610 TRIM51Q9BSJ1 452 aa20.74■□□□□ 0.91
RTN4-201ENST00000317610 EPB41L4BQ9H329 900 aa20.74■□□□□ 0.91
RTN4-201ENST00000317610 LRRC4CQ9HCJ2 640 aa20.74■□□□□ 0.91
RTN4-201ENST00000317610 PPP1R9AQ9ULJ8 1098 aa20.74■□□□□ 0.91
RTN4-201ENST00000317610 FAM187AA6NFU0 413 aa20.73■□□□□ 0.91
RTN4-201ENST00000317610 EIF3DO15371 548 aaKnown RBP eCLIP20.73■□□□□ 0.91
RTN4-201ENST00000317610 SPRED3Q2MJR0 410 aa20.73■□□□□ 0.91
RTN4-201ENST00000317610 ERMARDQ5T6L9 678 aa20.73■□□□□ 0.91
RTN4-201ENST00000317610 ZKSCAN4Q969J2 545 aaPredicted RBP20.73■□□□□ 0.91
RTN4-201ENST00000317610 CCDC114Q96M63 670 aa20.73■□□□□ 0.91
RTN4-201ENST00000317610 NAP1L3Q99457 506 aaPredicted RBP20.73■□□□□ 0.91
RTN4-201ENST00000317610 ZMYM2Q9UBW7 1377 aa20.73■□□□□ 0.91
RTN4-201ENST00000317610 GCNT3O95395 438 aa20.73■□□□□ 0.91
RTN4-201ENST00000317610 FAM98CQ17RN3 349 aaKnown RBP20.73■□□□□ 0.91
RTN4-201ENST00000317610 GKAP1Q5VSY0 366 aaPredicted RBP20.73■□□□□ 0.91
RTN4-201ENST00000317610 HOOK3Q86VS8 718 aa20.73■□□□□ 0.91
RTN4-201ENST00000317610 KCTD17Q8N5Z5 321 aa20.73■□□□□ 0.91
RTN4-201ENST00000317610 POLR3CQ9BUI4 534 aaPredicted RBP20.73■□□□□ 0.91
RTN4-201ENST00000317610 RUSC1Q9BVN2 902 aa20.73■□□□□ 0.91
RTN4-201ENST00000317610 FRMPD4Q14CM0 1322 aa20.73■□□□□ 0.91
RTN4-201ENST00000317610 CLIC2O15247 247 aa20.72■□□□□ 0.91
RTN4-201ENST00000317610 TBCAO75347 108 aaKnown RBP20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms