RNA–Protein interactions for RNA: ENST00000316399.10

SOX6-201, Transcript of SRY-box 6, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SOX6, Length 8,808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-201ENST00000316399 PCDHB4Q9Y5E5 795 aa7.75□□□□□ -1.17
SOX6-201ENST00000316399 TYW5A2RUC4 315 aaKnown RBP7.74□□□□□ -1.17
SOX6-201ENST00000316399 CDKL3Q8IVW4 592 aaPredicted RBP7.74□□□□□ -1.17
SOX6-201ENST00000316399 UPF3AQ9H1J1 476 aaKnown RBP7.74□□□□□ -1.17
SOX6-201ENST00000316399 GMNCA6NCL1 334 aa7.74□□□□□ -1.17
SOX6-201ENST00000316399 MOCS3O95396 460 aa7.74□□□□□ -1.17
SOX6-201ENST00000316399 DLATP10515 647 aaKnown RBP7.74□□□□□ -1.17
SOX6-201ENST00000316399 EFNA5P52803 228 aa7.74□□□□□ -1.17
SOX6-201ENST00000316399 SLC18A3Q16572 532 aa7.74□□□□□ -1.17
SOX6-201ENST00000316399 TMEM47Q9BQJ4 181 aa7.74□□□□□ -1.17
SOX6-201ENST00000316399 C2orf40Q9H1Z8 148 aa7.74□□□□□ -1.17
SOX6-201ENST00000316399 WDR35Q9P2L0 1181 aa7.74□□□□□ -1.17
SOX6-201ENST00000316399 ALAS1P13196 640 aa7.74□□□□□ -1.17
SOX6-201ENST00000316399 TAC1P20366 129 aa7.74□□□□□ -1.17
SOX6-201ENST00000316399 CCDC144BQ3MJ40 725 aa7.74□□□□□ -1.17
SOX6-201ENST00000316399 SLC27A3Q5K4L6 730 aa7.74□□□□□ -1.17
SOX6-201ENST00000316399 KCNV1Q6PIU1 500 aa7.74□□□□□ -1.17
SOX6-201ENST00000316399 TRMT1LQ7Z2T5 733 aaKnown RBP7.74□□□□□ -1.17
SOX6-201ENST00000316399 RFX6Q8HWS3 928 aa7.74□□□□□ -1.17
SOX6-201ENST00000316399 RDM1Q8NG50 284 aa7.74□□□□□ -1.17
SOX6-201ENST00000316399 FTOQ9C0B1 505 aaKnown RBP eCLIP7.74□□□□□ -1.17
SOX6-201ENST00000316399 C2orf54Q08AI8 447 aa7.74□□□□□ -1.17
SOX6-201ENST00000316399 MESDQ14696 234 aa7.74□□□□□ -1.17
SOX6-201ENST00000316399 RPS6KA2Q15349 733 aa7.74□□□□□ -1.17
SOX6-201ENST00000316399 TKFCQ3LXA3 575 aa7.74□□□□□ -1.17
SOX6-201ENST00000316399 KCTD16Q68DU8 428 aa7.74□□□□□ -1.17
SOX6-201ENST00000316399 TRAIPQ9BWF2 469 aa7.74□□□□□ -1.17
SOX6-201ENST00000316399 ASNSD1Q9NWL6 643 aa7.74□□□□□ -1.17
SOX6-201ENST00000316399 DIP2BQ9P265 1576 aa7.74□□□□□ -1.17
SOX6-201ENST00000316399 MROH2AA6NES4 1674 aa7.74□□□□□ -1.17
SOX6-201ENST00000316399 KIDINS220Q9ULH0 1771 aa7.74□□□□□ -1.17
SOX6-201ENST00000316399 CAPN9O14815 690 aa7.74□□□□□ -1.17
SOX6-201ENST00000316399 CA4P22748 312 aa7.74□□□□□ -1.17
SOX6-201ENST00000316399 GUCY2CP25092 1073 aa7.74□□□□□ -1.17
SOX6-201ENST00000316399 SOX5P35711 763 aa7.74□□□□□ -1.17
SOX6-201ENST00000316399 GGCXP38435 758 aa7.74□□□□□ -1.17
SOX6-201ENST00000316399 MAPRE2Q15555 327 aa7.74□□□□□ -1.17
SOX6-201ENST00000316399 ATG9AQ7Z3C6 839 aa7.74□□□□□ -1.17
SOX6-201ENST00000316399 NLRP14Q86W24 1093 aa7.74□□□□□ -1.17
SOX6-201ENST00000316399 PIGBQ92521 554 aa7.74□□□□□ -1.17
SOX6-201ENST00000316399 INO80BQ9C086 356 aaPredicted RBP7.74□□□□□ -1.17
SOX6-201ENST00000316399 HACD3Q9P035 362 aa7.74□□□□□ -1.17
SOX6-201ENST00000316399 CCDC22O60826 627 aa7.74□□□□□ -1.17
SOX6-201ENST00000316399 CDH16O75309 829 aa7.74□□□□□ -1.17
SOX6-201ENST00000316399 CHEK2O96017 543 aa7.74□□□□□ -1.17
SOX6-201ENST00000316399 SPDYCQ5MJ68 293 aa7.74□□□□□ -1.17
SOX6-201ENST00000316399 WDR75Q8IWA0 830 aaKnown RBP7.74□□□□□ -1.17
SOX6-201ENST00000316399 SCYL3Q8IZE3 742 aa7.74□□□□□ -1.17
SOX6-201ENST00000316399 MSL3Q8N5Y2 521 aaKnown RBP7.74□□□□□ -1.17
SOX6-201ENST00000316399 STAMBPL1Q96FJ0 436 aa7.74□□□□□ -1.17
SOX6-201ENST00000316399 EPN3Q9H201 632 aa7.74□□□□□ -1.17
SOX6-201ENST00000316399 TMEM51Q9NW97 253 aa7.74□□□□□ -1.17
SOX6-201ENST00000316399 IP6K2Q9UHH9 426 aa7.74□□□□□ -1.17
SOX6-201ENST00000316399 ERCC6L2Q5T890 1561 aa7.74□□□□□ -1.17
SOX6-201ENST00000316399 ZFXP17010 805 aaPredicted RBP7.74□□□□□ -1.17
SOX6-201ENST00000316399 SUPT20HL1Q3ZLR7 823 aa7.74□□□□□ -1.17
SOX6-201ENST00000316399 TAF1BQ53T94 588 aaPredicted RBP7.74□□□□□ -1.17
SOX6-201ENST00000316399 TRPV6Q9H1D0 765 aa7.74□□□□□ -1.17
SOX6-201ENST00000316399 FRMPD2Q68DX3 1309 aaPredicted RBP7.73□□□□□ -1.17
SOX6-201ENST00000316399 NR1I3Q14994 352 aa7.73□□□□□ -1.17
SOX6-201ENST00000316399 GTF3C2Q8WUA4 911 aaPredicted RBP7.73□□□□□ -1.17
SOX6-201ENST00000316399 ST7Q9NRC1 585 aa7.73□□□□□ -1.17
SOX6-201ENST00000316399 SGK1O00141 431 aa7.73□□□□□ -1.17
SOX6-201ENST00000316399 PALMO75781 387 aa7.73□□□□□ -1.17
SOX6-201ENST00000316399 PPP1R37O75864 691 aa7.73□□□□□ -1.17
SOX6-201ENST00000316399 GOLGA8HP0CJ92 632 aa7.73□□□□□ -1.17
SOX6-201ENST00000316399 CENPCQ03188 943 aa7.73□□□□□ -1.17
SOX6-201ENST00000316399 LAMB3Q13751 1172 aa7.73□□□□□ -1.17
SOX6-201ENST00000316399 TMED2Q15363 201 aa7.73□□□□□ -1.17
SOX6-201ENST00000316399 MIGA2Q7L4E1 593 aa7.73□□□□□ -1.17
SOX6-201ENST00000316399 RHOT1Q8IXI2 618 aa7.73□□□□□ -1.17
SOX6-201ENST00000316399 ENGASEQ8NFI3 743 aa7.73□□□□□ -1.17
SOX6-201ENST00000316399 KRT35Q92764 455 aa7.73□□□□□ -1.17
SOX6-201ENST00000316399 TOPORSQ9NS56 1045 aaPredicted RBP7.73□□□□□ -1.17
SOX6-201ENST00000316399 ADAMTS1Q9UHI8 967 aa7.73□□□□□ -1.17
SOX6-201ENST00000316399 MROH1Q8NDA8 1641 aa7.73□□□□□ -1.17
SOX6-201ENST00000316399 LRRIQ4A6NIV6 560 aa7.73□□□□□ -1.17
SOX6-201ENST00000316399 MGEA5O60502 916 aa7.73□□□□□ -1.17
SOX6-201ENST00000316399 EYA4O95677 639 aa7.73□□□□□ -1.17
SOX6-201ENST00000316399 MX2P20592 715 aa7.73□□□□□ -1.17
SOX6-201ENST00000316399 FNTAP49354 379 aa7.73□□□□□ -1.17
SOX6-201ENST00000316399 SHC4Q6S5L8 630 aa7.73□□□□□ -1.17
SOX6-201ENST00000316399 AGGF1Q8N302 714 aaeCLIP7.73□□□□□ -1.17
SOX6-201ENST00000316399 SPAG7O75391 227 aa7.73□□□□□ -1.17
SOX6-201ENST00000316399 CYFIP1Q7L576 1253 aa7.73□□□□□ -1.17
SOX6-201ENST00000316399 EIF1ADQ8N9N8 165 aaKnown RBP7.73□□□□□ -1.17
SOX6-201ENST00000316399 EIF2AQ9BY44 585 aaKnown RBP7.73□□□□□ -1.17
SOX6-201ENST00000316399 UBE2TQ9NPD8 197 aaPredicted RBP7.73□□□□□ -1.17
SOX6-201ENST00000316399 JAG2Q9Y219 1238 aa7.73□□□□□ -1.17
SOX6-201ENST00000316399 PPME1Q9Y570 386 aa7.73□□□□□ -1.17
SOX6-201ENST00000316399 ARHGAP10A1A4S6 786 aa7.73□□□□□ -1.17
SOX6-201ENST00000316399 EIF3HO15372 352 aaKnown RBP eCLIP7.73□□□□□ -1.17
SOX6-201ENST00000316399 FTCDO95954 541 aa7.73□□□□□ -1.17
SOX6-201ENST00000316399 PAMP19021 973 aa7.73□□□□□ -1.17
SOX6-201ENST00000316399 SP4Q02446 784 aa7.73□□□□□ -1.17
SOX6-201ENST00000316399 PDCD2Q16342 344 aaPredicted RBP7.73□□□□□ -1.17
SOX6-201ENST00000316399 CRLF3Q8IUI8 442 aa7.73□□□□□ -1.17
SOX6-201ENST00000316399 CPXCR1Q8N123 301 aa7.73□□□□□ -1.17
SOX6-201ENST00000316399 CYTH2Q99418 400 aa7.73□□□□□ -1.17
SOX6-201ENST00000316399 USP21Q9UK80 565 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms