RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 ARHGEF35A5YM69 484 aa8.34□□□□□ -1.07
TRIM55-202ENST00000315962 SPDYE16A6NNV3 312 aaPredicted RBP8.34□□□□□ -1.07
TRIM55-202ENST00000315962 PPP1R12BO60237 982 aaPredicted RBP8.34□□□□□ -1.07
TRIM55-202ENST00000315962 HIP1RO75146 1068 aa8.34□□□□□ -1.07
TRIM55-202ENST00000315962 RGS20O76081 388 aa8.34□□□□□ -1.07
TRIM55-202ENST00000315962 USP14P54578 494 aa8.34□□□□□ -1.07
TRIM55-202ENST00000315962 POLR2FP61218 127 aaKnown RBP8.34□□□□□ -1.07
TRIM55-202ENST00000315962 SP2Q02086 613 aa8.34□□□□□ -1.07
TRIM55-202ENST00000315962 KNOP1Q1ED39 458 aaKnown RBP8.34□□□□□ -1.07
TRIM55-202ENST00000315962 TSR1Q2NL82 804 aaKnown RBP8.34□□□□□ -1.07
TRIM55-202ENST00000315962 SUPT20HL1Q3ZLR7 823 aa8.34□□□□□ -1.07
TRIM55-202ENST00000315962 CT47A1Q5JQC4 288 aaPredicted RBP8.34□□□□□ -1.07
TRIM55-202ENST00000315962 HYIQ5T013 277 aa8.34□□□□□ -1.07
TRIM55-202ENST00000315962 GJB7Q6PEY0 223 aa8.34□□□□□ -1.07
TRIM55-202ENST00000315962 MOXD1Q6UVY6 613 aa8.34□□□□□ -1.07
TRIM55-202ENST00000315962 KIAA1328Q86T90 577 aa8.34□□□□□ -1.07
TRIM55-202ENST00000315962 MCF2L2Q86YR7 1114 aa8.34□□□□□ -1.07
TRIM55-202ENST00000315962 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.34□□□□□ -1.07
TRIM55-202ENST00000315962 ZNF668Q96K58 619 aaPredicted RBP8.34□□□□□ -1.07
TRIM55-202ENST00000315962 CCDC43Q96MW1 224 aaKnown RBP8.34□□□□□ -1.07
TRIM55-202ENST00000315962 AGO4Q9HCK5 861 aaKnown RBP8.34□□□□□ -1.07
TRIM55-202ENST00000315962 JADE2Q9NQC1 790 aa8.34□□□□□ -1.07
TRIM55-202ENST00000315962 BTBD7Q9P203 1132 aa8.34□□□□□ -1.07
TRIM55-202ENST00000315962 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.34□□□□□ -1.07
TRIM55-202ENST00000315962 COL4A3BPQ9Y5P4 624 aa8.34□□□□□ -1.07
TRIM55-202ENST00000315962 RGPD3A6NKT7 1758 aaPredicted RBP8.34□□□□□ -1.07
TRIM55-202ENST00000315962 RGPD4Q7Z3J3 1758 aa8.34□□□□□ -1.07
TRIM55-202ENST00000315962 LRRC53A6NM62 1247 aa8.34□□□□□ -1.07
TRIM55-202ENST00000315962 EIF3CLB5ME19 914 aaKnown RBP8.34□□□□□ -1.07
TRIM55-202ENST00000315962 EIF3JO75822 258 aaKnown RBP8.34□□□□□ -1.07
TRIM55-202ENST00000315962 NDUFA10O95299 355 aa8.34□□□□□ -1.07
TRIM55-202ENST00000315962 EYA4O95677 639 aa8.34□□□□□ -1.07
TRIM55-202ENST00000315962 SLC9A1P19634 815 aa8.34□□□□□ -1.07
TRIM55-202ENST00000315962 GGCXP38435 758 aa8.34□□□□□ -1.07
TRIM55-202ENST00000315962 RNASE9P60153 205 aaKnown RBP8.34□□□□□ -1.07
TRIM55-202ENST00000315962 HERVK_113P62684 666 aa8.34□□□□□ -1.07
TRIM55-202ENST00000315962 PPP2R5CQ13362 524 aa8.34□□□□□ -1.07
TRIM55-202ENST00000315962 TMEM63BQ5T3F8 832 aa8.34□□□□□ -1.07
TRIM55-202ENST00000315962 SWSAP1Q6NVH7 229 aa8.34□□□□□ -1.07
TRIM55-202ENST00000315962 PADI6Q6TGC4 694 aa8.34□□□□□ -1.07
TRIM55-202ENST00000315962 C1orf186Q6ZWK4 172 aa8.34□□□□□ -1.07
TRIM55-202ENST00000315962 CACNA2D4Q7Z3S7 1137 aa8.34□□□□□ -1.07
TRIM55-202ENST00000315962 FAM178BQ8IXR5 827 aa8.34□□□□□ -1.07
TRIM55-202ENST00000315962 EIF3CQ99613 913 aaKnown RBP8.34□□□□□ -1.07
TRIM55-202ENST00000315962 AS3MTQ9HBK9 375 aa8.34□□□□□ -1.07
TRIM55-202ENST00000315962 CWC15Q9P013 229 aaKnown RBP8.34□□□□□ -1.07
TRIM55-202ENST00000315962 CSADQ9Y600 493 aa8.34□□□□□ -1.07
TRIM55-202ENST00000315962 EPN1Q9Y6I3 576 aaPredicted RBP8.34□□□□□ -1.07
TRIM55-202ENST00000315962 COL2A1P02458 1487 aaPredicted RBP8.33□□□□□ -1.08
TRIM55-202ENST00000315962 LTBP3Q9NS15 1303 aa8.33□□□□□ -1.08
TRIM55-202ENST00000315962 ATP8B1O43520 1251 aa8.33□□□□□ -1.08
TRIM55-202ENST00000315962 CYP2C8P10632 490 aa8.33□□□□□ -1.08
TRIM55-202ENST00000315962 YWHABP31946 246 aaKnown RBP8.33□□□□□ -1.08
TRIM55-202ENST00000315962 DSG3P32926 999 aa8.33□□□□□ -1.08
TRIM55-202ENST00000315962 KCNMA1Q12791 1236 aa8.33□□□□□ -1.08
TRIM55-202ENST00000315962 FAM102BQ5T8I3 360 aa8.33□□□□□ -1.08
TRIM55-202ENST00000315962 CATSPERGQ6ZRH7 1159 aa8.33□□□□□ -1.08
TRIM55-202ENST00000315962 CYFIP1Q7L576 1253 aa8.33□□□□□ -1.08
TRIM55-202ENST00000315962 SYCP3Q8IZU3 236 aa8.33□□□□□ -1.08
TRIM55-202ENST00000315962 MSANTD4Q8NCY6 345 aa8.33□□□□□ -1.08
TRIM55-202ENST00000315962 ZBTB10Q96DT7 871 aa8.33□□□□□ -1.08
TRIM55-202ENST00000315962 LRRC27Q9C0I9 530 aa8.33□□□□□ -1.08
TRIM55-202ENST00000315962 NHEJ1Q9H9Q4 299 aaPredicted RBP8.33□□□□□ -1.08
TRIM55-202ENST00000315962 SSC5DA1L4H1 1573 aa8.33□□□□□ -1.08
TRIM55-202ENST00000315962 GOLGA8IPA6NC78 632 aa8.33□□□□□ -1.08
TRIM55-202ENST00000315962 GOLGA8JA6NMD2 632 aa8.33□□□□□ -1.08
TRIM55-202ENST00000315962 CCDC169A6NNP5 214 aa8.33□□□□□ -1.08
TRIM55-202ENST00000315962 BACH1O14867 736 aa8.33□□□□□ -1.08
TRIM55-202ENST00000315962 NCK2O43639 380 aa8.33□□□□□ -1.08
TRIM55-202ENST00000315962 SYF2O95926 243 aaKnown RBP8.33□□□□□ -1.08
TRIM55-202ENST00000315962 TRIM49P0CI25 452 aa8.33□□□□□ -1.08
TRIM55-202ENST00000315962 TRIM49CP0CI26 452 aa8.33□□□□□ -1.08
TRIM55-202ENST00000315962 LIG3P49916 1009 aa8.33□□□□□ -1.08
TRIM55-202ENST00000315962 LRRC63Q05C16 580 aa8.33□□□□□ -1.08
TRIM55-202ENST00000315962 KCNH2Q12809 1159 aa8.33□□□□□ -1.08
TRIM55-202ENST00000315962 Q3C1V9 767 aa8.33□□□□□ -1.08
TRIM55-202ENST00000315962 ZCWPW2Q504Y3 356 aa8.33□□□□□ -1.08
TRIM55-202ENST00000315962 XKR9Q5GH70 373 aa8.33□□□□□ -1.08
TRIM55-202ENST00000315962 PCNX4Q63HM2 1172 aa8.33□□□□□ -1.08
TRIM55-202ENST00000315962 CYP26C1Q6V0L0 522 aa8.33□□□□□ -1.08
TRIM55-202ENST00000315962 DAW1Q8N136 415 aa8.33□□□□□ -1.08
TRIM55-202ENST00000315962 EHMT1Q9H9B1 1298 aa8.33□□□□□ -1.08
TRIM55-202ENST00000315962 PARVGQ9HBI0 331 aa8.33□□□□□ -1.08
TRIM55-202ENST00000315962 TXNRD2Q9NNW7 524 aa8.33□□□□□ -1.08
TRIM55-202ENST00000315962 ADARB2Q9NS39 739 aaKnown RBP8.33□□□□□ -1.08
TRIM55-202ENST00000315962 CYP39A1Q9NYL5 469 aa8.33□□□□□ -1.08
TRIM55-202ENST00000315962 GABBR1Q9UBS5 961 aa8.33□□□□□ -1.08
TRIM55-202ENST00000315962 ZNF112Q9UJU3 913 aa8.33□□□□□ -1.08
TRIM55-202ENST00000315962 RAB21Q9UL25 225 aa8.33□□□□□ -1.08
TRIM55-202ENST00000315962 ASTN1O14525 1302 aa8.33□□□□□ -1.08
TRIM55-202ENST00000315962 SLC16A4O15374 487 aa8.33□□□□□ -1.08
TRIM55-202ENST00000315962 TGFB1I1O43294 461 aa8.33□□□□□ -1.08
TRIM55-202ENST00000315962 CCT5P48643 541 aa8.33□□□□□ -1.08
TRIM55-202ENST00000315962 PEX3P56589 373 aa8.33□□□□□ -1.08
TRIM55-202ENST00000315962 AMPD2Q01433 879 aa8.33□□□□□ -1.08
TRIM55-202ENST00000315962 GFPT1Q06210 699 aaPredicted RBP8.33□□□□□ -1.08
TRIM55-202ENST00000315962 PSMD2Q13200 908 aa8.33□□□□□ -1.08
TRIM55-202ENST00000315962 TDRD12Q587J7 1177 aaKnown RBP8.33□□□□□ -1.08
TRIM55-202ENST00000315962 KCTD16Q68DU8 428 aa8.33□□□□□ -1.08
TRIM55-202ENST00000315962 DPY19L2Q6NUT2 758 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms