RNA–Protein interactions for RNA: ENST00000312547.6

CHMP2A-201, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-201ENST00000312547 TBC1D8BQ0IIM8 1120 aa14.08□□□□□ -0.16
CHMP2A-201ENST00000312547 ARSHQ5FYA8 562 aa14.08□□□□□ -0.16
CHMP2A-201ENST00000312547 FAM47CQ5HY64 1035 aa14.08□□□□□ -0.16
CHMP2A-201ENST00000312547 KRBA2Q6ZNG9 492 aa14.08□□□□□ -0.16
CHMP2A-201ENST00000312547 ANKRD33Q7Z3H0 272 aa14.08□□□□□ -0.16
CHMP2A-201ENST00000312547 SH3RF1Q7Z6J0 888 aa14.08□□□□□ -0.16
CHMP2A-201ENST00000312547 FAM126BQ8IXS8 530 aa14.08□□□□□ -0.16
CHMP2A-201ENST00000312547 ZBTB10Q96DT7 871 aa14.08□□□□□ -0.16
CHMP2A-201ENST00000312547 TIGD1Q96MW7 591 aa14.08□□□□□ -0.16
CHMP2A-201ENST00000312547 TNMDQ9H2S6 317 aa14.08□□□□□ -0.16
CHMP2A-201ENST00000312547 KCND2Q9NZV8 630 aa14.08□□□□□ -0.16
CHMP2A-201ENST00000312547 TUBE1Q9UJT0 475 aa14.08□□□□□ -0.16
CHMP2A-201ENST00000312547 CEP290O15078 2479 aa14.08□□□□□ -0.16
CHMP2A-201ENST00000312547 MYMKA6NI61 221 aa14.07□□□□□ -0.16
CHMP2A-201ENST00000312547 TREHO43280 583 aa14.07□□□□□ -0.16
CHMP2A-201ENST00000312547 CD4P01730 458 aa14.07□□□□□ -0.16
CHMP2A-201ENST00000312547 SSBP05455 408 aaKnown RBP eCLIP14.07□□□□□ -0.16
CHMP2A-201ENST00000312547 GUCY2CP25092 1073 aa14.07□□□□□ -0.16
CHMP2A-201ENST00000312547 ATN1P54259 1190 aaPredicted RBP14.07□□□□□ -0.16
CHMP2A-201ENST00000312547 MKRN4PQ13434 485 aaPredicted RBP14.07□□□□□ -0.16
CHMP2A-201ENST00000312547 EMC2Q15006 297 aa14.07□□□□□ -0.16
CHMP2A-201ENST00000312547 CNNM4Q6P4Q7 775 aa14.07□□□□□ -0.16
CHMP2A-201ENST00000312547 SV2BQ7L1I2 683 aa14.07□□□□□ -0.16
CHMP2A-201ENST00000312547 SERINC5Q86VE9 423 aa14.07□□□□□ -0.16
CHMP2A-201ENST00000312547 GPBP1Q86WP2 473 aa14.07□□□□□ -0.16
CHMP2A-201ENST00000312547 ELOA2Q8IYF1 753 aaPredicted RBP14.07□□□□□ -0.16
CHMP2A-201ENST00000312547 EXOC8Q8IYI6 725 aa14.07□□□□□ -0.16
CHMP2A-201ENST00000312547 GPT2Q8TD30 523 aa14.07□□□□□ -0.16
CHMP2A-201ENST00000312547 SLC7A3Q8WY07 619 aa14.07□□□□□ -0.16
CHMP2A-201ENST00000312547 PAGE5Q96GU1 130 aa14.07□□□□□ -0.16
CHMP2A-201ENST00000312547 CCDC43Q96MW1 224 aaKnown RBP14.07□□□□□ -0.16
CHMP2A-201ENST00000312547 TOX2Q96NM4 488 aa14.07□□□□□ -0.16
CHMP2A-201ENST00000312547 JPH2Q9BR39 696 aaPredicted RBP14.07□□□□□ -0.16
CHMP2A-201ENST00000312547 TRMT13Q9NUP7 481 aaKnown RBP14.07□□□□□ -0.16
CHMP2A-201ENST00000312547 PCDHA2Q9Y5H9 948 aa14.07□□□□□ -0.16
CHMP2A-201ENST00000312547 WDR81Q562E7 1941 aa14.06□□□□□ -0.16
CHMP2A-201ENST00000312547 SMIM35A0A1B0GVV1 85 aa14.06□□□□□ -0.16
CHMP2A-201ENST00000312547 GAS2O43903 313 aaKnown RBP14.06□□□□□ -0.16
CHMP2A-201ENST00000312547 B4GALT4O60513 344 aa14.06□□□□□ -0.16
CHMP2A-201ENST00000312547 USO1O60763 962 aaKnown RBP14.06□□□□□ -0.16
CHMP2A-201ENST00000312547 POLGP54098 1239 aaPredicted RBP14.06□□□□□ -0.16
CHMP2A-201ENST00000312547 MAPK7Q13164 816 aa14.06□□□□□ -0.16
CHMP2A-201ENST00000312547 PTGISQ16647 500 aa14.06□□□□□ -0.16
CHMP2A-201ENST00000312547 LRRC26Q2I0M4 334 aa14.06□□□□□ -0.16
CHMP2A-201ENST00000312547 TAF2Q6P1X5 1199 aa14.06□□□□□ -0.16
CHMP2A-201ENST00000312547 RUFY4Q6ZNE9 571 aa14.06□□□□□ -0.16
CHMP2A-201ENST00000312547 RPAINQ86UA6 219 aa14.06□□□□□ -0.16
CHMP2A-201ENST00000312547 CEP57L1Q8IYX8 460 aa14.06□□□□□ -0.16
CHMP2A-201ENST00000312547 KIAA0319LQ8IZA0 1049 aa14.06□□□□□ -0.16
CHMP2A-201ENST00000312547 CNNM3Q8NE01 707 aa14.06□□□□□ -0.16
CHMP2A-201ENST00000312547 MCPH1Q8NEM0 835 aa14.06□□□□□ -0.16
CHMP2A-201ENST00000312547 TIPINQ9BVW5 301 aa14.06□□□□□ -0.16
CHMP2A-201ENST00000312547 TRPV6Q9H1D0 765 aa14.06□□□□□ -0.16
CHMP2A-201ENST00000312547 ATP6V0A4Q9HBG4 840 aa14.06□□□□□ -0.16
CHMP2A-201ENST00000312547 DACT1Q9NYF0 836 aa14.06□□□□□ -0.16
CHMP2A-201ENST00000312547 MROH7Q68CQ1 1323 aa14.06□□□□□ -0.16
CHMP2A-201ENST00000312547 CYP2C9P11712 490 aa14.05□□□□□ -0.16
CHMP2A-201ENST00000312547 ARL2P36404 184 aa14.05□□□□□ -0.16
CHMP2A-201ENST00000312547 MDM2Q00987 491 aaPredicted RBP14.05□□□□□ -0.16
CHMP2A-201ENST00000312547 TLE2Q04725 743 aa14.05□□□□□ -0.16
CHMP2A-201ENST00000312547 PTK7Q13308 1070 aa14.05□□□□□ -0.16
CHMP2A-201ENST00000312547 DRP2Q13474 957 aa14.05□□□□□ -0.16
CHMP2A-201ENST00000312547 GIT2Q14161 759 aa14.05□□□□□ -0.16
CHMP2A-201ENST00000312547 DHX8Q14562 1220 aaKnown RBP14.05□□□□□ -0.16
CHMP2A-201ENST00000312547 TRIM71Q2Q1W2 868 aaKnown RBP14.05□□□□□ -0.16
CHMP2A-201ENST00000312547 TRIM60Q495X7 471 aa14.05□□□□□ -0.16
CHMP2A-201ENST00000312547 EFCAB12Q6NXP0 572 aa14.05□□□□□ -0.16
CHMP2A-201ENST00000312547 DAW1Q8N136 415 aa14.05□□□□□ -0.16
CHMP2A-201ENST00000312547 RETREG2Q8NC44 543 aa14.05□□□□□ -0.16
CHMP2A-201ENST00000312547 STAMQ92783 540 aa14.05□□□□□ -0.16
CHMP2A-201ENST00000312547 WNT8BQ93098 351 aa14.05□□□□□ -0.16
CHMP2A-201ENST00000312547 DNAJC19Q96DA6 116 aa14.05□□□□□ -0.16
CHMP2A-201ENST00000312547 C7orf25Q9BPX7 421 aa14.05□□□□□ -0.16
CHMP2A-201ENST00000312547 TRIM9Q9C026 710 aa14.05□□□□□ -0.16
CHMP2A-201ENST00000312547 BMP2KQ9NSY1 1161 aaPredicted RBP14.05□□□□□ -0.16
CHMP2A-201ENST00000312547 MYH9P35579 1960 aaKnown RBP14.05□□□□□ -0.16
CHMP2A-201ENST00000312547 NPHP3-ACAD11A0A0J9YXS1 232 aa14.04□□□□□ -0.16
CHMP2A-201ENST00000312547 FRMD3A2A2Y4 597 aa14.04□□□□□ -0.16
CHMP2A-201ENST00000312547 PQBP1O60828 265 aaKnown RBP14.04□□□□□ -0.16
CHMP2A-201ENST00000312547 KINO60870 393 aaKnown RBP14.04□□□□□ -0.16
CHMP2A-201ENST00000312547 MBD3O95983 291 aa14.04□□□□□ -0.16
CHMP2A-201ENST00000312547 CLCN3P51790 818 aa14.04□□□□□ -0.16
CHMP2A-201ENST00000312547 ZNF131P52739 623 aa14.04□□□□□ -0.16
CHMP2A-201ENST00000312547 RTP1P59025 263 aa14.04□□□□□ -0.16
CHMP2A-201ENST00000312547 AMPD3Q01432 767 aa14.04□□□□□ -0.16
CHMP2A-201ENST00000312547 RBL2Q08999 1139 aa14.04□□□□□ -0.16
CHMP2A-201ENST00000312547 IER5Q5VY09 327 aa14.04□□□□□ -0.16
CHMP2A-201ENST00000312547 KANK3Q6NY19 840 aa14.04□□□□□ -0.16
CHMP2A-201ENST00000312547 GRAMD1CQ8IYS0 662 aa14.04□□□□□ -0.16
CHMP2A-201ENST00000312547 LRRC71Q8N4P6 559 aa14.04□□□□□ -0.16
CHMP2A-201ENST00000312547 DHX38Q92620 1227 aaKnown RBP14.04□□□□□ -0.16
CHMP2A-201ENST00000312547 DDX12PQ92771 950 aa14.04□□□□□ -0.16
CHMP2A-201ENST00000312547 TMEM143Q96AN5 459 aa14.04□□□□□ -0.16
CHMP2A-201ENST00000312547 REEP2Q9BRK0 252 aa14.04□□□□□ -0.16
CHMP2A-201ENST00000312547 LRRC27Q9C0I9 530 aa14.04□□□□□ -0.16
CHMP2A-201ENST00000312547 SUGCTQ9HAC7 445 aa14.04□□□□□ -0.16
CHMP2A-201ENST00000312547 GPRC5CQ9NQ84 441 aa14.04□□□□□ -0.16
CHMP2A-201ENST00000312547 ODF2LQ9ULJ1 636 aa14.04□□□□□ -0.16
CHMP2A-201ENST00000312547 GTPBP6O43824 516 aaPredicted RBP14.03□□□□□ -0.16
CHMP2A-201ENST00000312547 HIP1RO75146 1068 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms