RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 TEKT4Q8WW24 435 aa16.51■□□□□ 0.23
HCFC1-201ENST00000310441 A0A0G2JND7 137 aa16.51■□□□□ 0.23
HCFC1-201ENST00000310441 SLC9A1P19634 815 aa16.51■□□□□ 0.23
HCFC1-201ENST00000310441 TAP1Q03518 808 aa16.51■□□□□ 0.23
HCFC1-201ENST00000310441 IFT43Q96FT9 208 aa16.51■□□□□ 0.23
HCFC1-201ENST00000310441 GOLPH3LQ9H4A5 285 aa16.51■□□□□ 0.23
HCFC1-201ENST00000310441 ZNF229Q9UJW7 825 aa16.51■□□□□ 0.23
HCFC1-201ENST00000310441 ATP7AQ04656 1500 aa16.51■□□□□ 0.23
HCFC1-201ENST00000310441 KRT7P08729 469 aa16.51■□□□□ 0.23
HCFC1-201ENST00000310441 GNAT1P11488 350 aa16.51■□□□□ 0.23
HCFC1-201ENST00000310441 NUMA1Q14980 2115 aa16.51■□□□□ 0.23
HCFC1-201ENST00000310441 FAM47AQ5JRC9 791 aa16.51■□□□□ 0.23
HCFC1-201ENST00000310441 TSPYL6Q8N831 410 aa16.51■□□□□ 0.23
HCFC1-201ENST00000310441 PBXIP1Q96AQ6 731 aa16.51■□□□□ 0.23
HCFC1-201ENST00000310441 PPCSQ9HAB8 311 aa16.51■□□□□ 0.23
HCFC1-201ENST00000310441 POLR1AO95602 1720 aaPredicted RBP16.51■□□□□ 0.23
HCFC1-201ENST00000310441 MYBL1P10243 752 aa16.51■□□□□ 0.23
HCFC1-201ENST00000310441 KRT72Q14CN4 511 aa16.51■□□□□ 0.23
HCFC1-201ENST00000310441 ANKS3Q6ZW76 656 aa16.51■□□□□ 0.23
HCFC1-201ENST00000310441 CYTH2Q99418 400 aa16.51■□□□□ 0.23
HCFC1-201ENST00000310441 ASNSD1Q9NWL6 643 aa16.51■□□□□ 0.23
HCFC1-201ENST00000310441 CHL1O00533 1208 aa16.51■□□□□ 0.23
HCFC1-201ENST00000310441 ECM2O94769 699 aaPredicted RBP16.51■□□□□ 0.23
HCFC1-201ENST00000310441 WDR47O94967 919 aa16.51■□□□□ 0.23
HCFC1-201ENST00000310441 ORC2Q13416 577 aaPredicted RBP16.51■□□□□ 0.23
HCFC1-201ENST00000310441 HACD3Q9P035 362 aa16.51■□□□□ 0.23
HCFC1-201ENST00000310441 JAK3P52333 1124 aa16.51■□□□□ 0.23
HCFC1-201ENST00000310441 FAM133AQ8N9E0 248 aa16.51■□□□□ 0.23
HCFC1-201ENST00000310441 ZBTB12Q9Y330 459 aaPredicted RBP16.51■□□□□ 0.23
HCFC1-201ENST00000310441 RPAP1Q9BWH6 1393 aaPredicted RBP16.51■□□□□ 0.23
HCFC1-201ENST00000310441 ACAP3Q96P50 834 aa16.5■□□□□ 0.23
HCFC1-201ENST00000310441 TBC1D23Q9NUY8 699 aa16.5■□□□□ 0.23
HCFC1-201ENST00000310441 PCDHGB4Q9UN71 923 aa16.5■□□□□ 0.23
HCFC1-201ENST00000310441 TNFAIP2Q03169 654 aa16.5■□□□□ 0.23
HCFC1-201ENST00000310441 SLFNL1Q499Z3 407 aa16.5■□□□□ 0.23
HCFC1-201ENST00000310441 ZNF594Q96JF6 807 aaPredicted RBP16.5■□□□□ 0.23
HCFC1-201ENST00000310441 SYTL2Q9HCH5 934 aa16.5■□□□□ 0.23
HCFC1-201ENST00000310441 ELF1P32519 619 aa16.5■□□□□ 0.23
HCFC1-201ENST00000310441 TTC23LQ6PF05 361 aa16.5■□□□□ 0.23
HCFC1-201ENST00000310441 SESN1Q9Y6P5 492 aa16.5■□□□□ 0.23
HCFC1-201ENST00000310441 NNMTP40261 264 aa16.5■□□□□ 0.23
HCFC1-201ENST00000310441 DEPDC1Q5TB30 811 aa16.5■□□□□ 0.23
HCFC1-201ENST00000310441 PNMA3Q9UL41 463 aa16.5■□□□□ 0.23
HCFC1-201ENST00000310441 MRFAP1Q9Y605 127 aa16.5■□□□□ 0.23
HCFC1-201ENST00000310441 SCFD1Q8WVM8 642 aa16.5■□□□□ 0.23
HCFC1-201ENST00000310441 MICAL3Q7RTP6 2002 aa16.5■□□□□ 0.23
HCFC1-201ENST00000310441 M0R2C6 588 aa16.5■□□□□ 0.23
HCFC1-201ENST00000310441 MXD4Q14582 209 aaPredicted RBP16.5■□□□□ 0.23
HCFC1-201ENST00000310441 SLFN13Q68D06 897 aa16.5■□□□□ 0.23
HCFC1-201ENST00000310441 UHMK1Q8TAS1 419 aaKnown RBP16.5■□□□□ 0.23
HCFC1-201ENST00000310441 BTG4Q9NY30 223 aa16.5■□□□□ 0.23
HCFC1-201ENST00000310441 PCDHB8Q9UN66 801 aa16.5■□□□□ 0.23
HCFC1-201ENST00000310441 POTEAQ6S8J7 498 aa16.5■□□□□ 0.23
HCFC1-201ENST00000310441 TRIM72Q6ZMU5 477 aa16.5■□□□□ 0.23
HCFC1-201ENST00000310441 HEXIM2Q96MH2 286 aaKnown RBP16.5■□□□□ 0.23
HCFC1-201ENST00000310441 KANSL2Q9H9L4 492 aa16.5■□□□□ 0.23
HCFC1-201ENST00000310441 KLHL8Q9P2G9 620 aaPredicted RBP16.5■□□□□ 0.23
HCFC1-201ENST00000310441 hCG_1642624A0A1W2PR95 340 aa16.49■□□□□ 0.23
HCFC1-201ENST00000310441 AARS2Q5JTZ9 985 aaKnown RBP16.49■□□□□ 0.23
HCFC1-201ENST00000310441 TBC1D4O60343 1298 aa16.49■□□□□ 0.23
HCFC1-201ENST00000310441 MOCS3O95396 460 aa16.49■□□□□ 0.23
HCFC1-201ENST00000310441 DDX56Q9NY93 547 aaKnown RBP16.49■□□□□ 0.23
HCFC1-201ENST00000310441 NFU1Q9UMS0 254 aa16.49■□□□□ 0.23
HCFC1-201ENST00000310441 XDHP47989 1333 aa16.49■□□□□ 0.23
HCFC1-201ENST00000310441 GOLGA8SH3BPF8 625 aa16.49■□□□□ 0.23
HCFC1-201ENST00000310441 ENC1O14682 589 aa16.49■□□□□ 0.23
HCFC1-201ENST00000310441 PTPROQ16827 1216 aa16.49■□□□□ 0.23
HCFC1-201ENST00000310441 LRRC47Q8N1G4 583 aaKnown RBP16.49■□□□□ 0.23
HCFC1-201ENST00000310441 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.49■□□□□ 0.23
HCFC1-201ENST00000310441 SMYD3Q9H7B4 428 aa16.49■□□□□ 0.23
HCFC1-201ENST00000310441 MTMR6Q9Y217 621 aa16.49■□□□□ 0.23
HCFC1-201ENST00000310441 CTIFO43310 598 aaKnown RBP16.49■□□□□ 0.23
HCFC1-201ENST00000310441 ARIH2O95376 493 aa16.49■□□□□ 0.23
HCFC1-201ENST00000310441 RWDD4Q6NW29 188 aaKnown RBP16.49■□□□□ 0.23
HCFC1-201ENST00000310441 ZNF556Q9HAH1 456 aa16.49■□□□□ 0.23
HCFC1-201ENST00000310441 LMTK3Q96Q04 1460 aa16.49■□□□□ 0.23
HCFC1-201ENST00000310441 TFDP2Q14188 446 aa16.49■□□□□ 0.23
HCFC1-201ENST00000310441 KYAT1Q16773 422 aa16.49■□□□□ 0.23
HCFC1-201ENST00000310441 AASDHQ4L235 1098 aaPredicted RBP16.49■□□□□ 0.23
HCFC1-201ENST00000310441 FASTKD5Q7L8L6 764 aaKnown RBP16.49■□□□□ 0.23
HCFC1-201ENST00000310441 VSTM4Q8IW00 320 aa16.49■□□□□ 0.23
HCFC1-201ENST00000310441 APLFQ8IW19 511 aaPredicted RBP16.49■□□□□ 0.23
HCFC1-201ENST00000310441 MRPS26Q9BYN8 205 aaKnown RBP16.49■□□□□ 0.23
HCFC1-201ENST00000310441 GFPT2O94808 682 aa16.49■□□□□ 0.23
HCFC1-201ENST00000310441 GPKOWQ92917 476 aaPredicted RBP eCLIP16.49■□□□□ 0.23
HCFC1-201ENST00000310441 GTSE1Q9NYZ3 720 aa16.49■□□□□ 0.23
HCFC1-201ENST00000310441 ADA2Q9NZK5 511 aa16.49■□□□□ 0.23
HCFC1-201ENST00000310441 THRAP3Q9Y2W1 955 aaKnown RBP16.49■□□□□ 0.23
HCFC1-201ENST00000310441 HNRNPCP07910 306 aaKnown RBP eCLIP16.48■□□□□ 0.23
HCFC1-201ENST00000310441 SUPT20HL1Q3ZLR7 823 aa16.48■□□□□ 0.23
HCFC1-201ENST00000310441 PHACTR3Q96KR7 559 aa16.48■□□□□ 0.23
HCFC1-201ENST00000310441 DHX36Q9H2U1 1008 aaKnown RBP16.48■□□□□ 0.23
HCFC1-201ENST00000310441 C10orf88Q9H8K7 445 aa16.48■□□□□ 0.23
HCFC1-201ENST00000310441 SEC24BO95487 1268 aa16.48■□□□□ 0.23
HCFC1-201ENST00000310441 KCNA1Q09470 495 aa16.48■□□□□ 0.23
HCFC1-201ENST00000310441 FAM167AQ96KS9 214 aa16.48■□□□□ 0.23
HCFC1-201ENST00000310441 PLAAQ9Y263 795 aa16.48■□□□□ 0.23
HCFC1-201ENST00000310441 FGGP02679 453 aa16.48■□□□□ 0.23
HCFC1-201ENST00000310441 CCDC85BQ15834 202 aaPredicted RBP16.48■□□□□ 0.23
HCFC1-201ENST00000310441 ERICH1Q86X53 443 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms