RNA–Protein interactions for RNA: ENST00000310015.10

SP3-201, Transcript of Sp3 transcription factor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SP3, Length 6,359 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP3-201ENST00000310015 SNX25Q9H3E2 840 aa12.41□□□□□ -0.42
SP3-201ENST00000310015 PRDM5Q9NQX1 630 aaPredicted RBP12.41□□□□□ -0.42
SP3-201ENST00000310015 EHD2Q9NZN4 543 aa12.41□□□□□ -0.42
SP3-201ENST00000310015 PCDHA12Q9UN75 941 aa12.41□□□□□ -0.42
SP3-201ENST00000310015 MYO1GB0I1T2 1018 aa12.41□□□□□ -0.42
SP3-201ENST00000310015 RASA4BC9J798 803 aa12.41□□□□□ -0.42
SP3-201ENST00000310015 RASA4O43374 803 aa12.41□□□□□ -0.42
SP3-201ENST00000310015 NLRP9Q7RTR0 991 aa12.41□□□□□ -0.42
SP3-201ENST00000310015 TLK2Q86UE8 772 aa12.41□□□□□ -0.42
SP3-201ENST00000310015 ZFYVE1Q9HBF4 777 aa12.41□□□□□ -0.42
SP3-201ENST00000310015 GCNT4Q9P109 453 aa12.41□□□□□ -0.42
SP3-201ENST00000310015 GOLGA8IPA6NC78 632 aa12.4□□□□□ -0.42
SP3-201ENST00000310015 GMNCA6NCL1 334 aa12.4□□□□□ -0.42
SP3-201ENST00000310015 TMEM247A6NEH6 219 aa12.4□□□□□ -0.42
SP3-201ENST00000310015 GOLGA8JA6NMD2 632 aa12.4□□□□□ -0.42
SP3-201ENST00000310015 USP17L12C9JPN9 530 aa12.4□□□□□ -0.42
SP3-201ENST00000310015 USP17L21D6R901 530 aa12.4□□□□□ -0.42
SP3-201ENST00000310015 TRIM66O15016 1216 aa12.4□□□□□ -0.42
SP3-201ENST00000310015 TRIM16O95361 564 aa12.4□□□□□ -0.42
SP3-201ENST00000310015 CYP27A1Q02318 531 aa12.4□□□□□ -0.42
SP3-201ENST00000310015 NLRP14Q86W24 1093 aa12.4□□□□□ -0.42
SP3-201ENST00000310015 NXF1Q9UBU9 619 aaKnown RBP12.4□□□□□ -0.42
SP3-201ENST00000310015 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.4□□□□□ -0.42
SP3-201ENST00000310015 SUN2Q9UH99 717 aa12.4□□□□□ -0.42
SP3-201ENST00000310015 TTC7AQ9ULT0 858 aaPredicted RBP12.4□□□□□ -0.42
SP3-201ENST00000310015 TRPM2O94759 1503 aa12.4□□□□□ -0.42
SP3-201ENST00000310015 NCK2O43639 380 aa12.4□□□□□ -0.42
SP3-201ENST00000310015 TOM1O60784 492 aa12.4□□□□□ -0.42
SP3-201ENST00000310015 IMPDH2P12268 514 aa12.4□□□□□ -0.42
SP3-201ENST00000310015 EAPPQ56P03 285 aaPredicted RBP12.4□□□□□ -0.42
SP3-201ENST00000310015 HDDC2Q7Z4H3 204 aa12.4□□□□□ -0.42
SP3-201ENST00000310015 NCAPG2Q86XI2 1143 aa12.4□□□□□ -0.42
SP3-201ENST00000310015 EXOC8Q8IYI6 725 aa12.4□□□□□ -0.42
SP3-201ENST00000310015 PDCD6IPQ8WUM4 868 aaKnown RBP12.4□□□□□ -0.42
SP3-201ENST00000310015 OLFM3Q96PB7 478 aa12.4□□□□□ -0.42
SP3-201ENST00000310015 PLEKHF1Q96S99 279 aa12.4□□□□□ -0.42
SP3-201ENST00000310015 TEKT3Q9BXF9 490 aa12.4□□□□□ -0.42
SP3-201ENST00000310015 THAP9Q9H5L6 903 aa12.4□□□□□ -0.42
SP3-201ENST00000310015 V9GYQ6 96 aa12.4□□□□□ -0.42
SP3-201ENST00000310015 TCP10L2B9ZVM9 353 aa12.4□□□□□ -0.42
SP3-201ENST00000310015 HSPA6P17066 643 aa12.4□□□□□ -0.42
SP3-201ENST00000310015 CENPAP49450 140 aa12.4□□□□□ -0.42
SP3-201ENST00000310015 GALNT17Q6IS24 598 aa12.4□□□□□ -0.42
SP3-201ENST00000310015 LONP2Q86WA8 852 aa12.4□□□□□ -0.42
SP3-201ENST00000310015 CCNYL1Q8N7R7 359 aa12.4□□□□□ -0.42
SP3-201ENST00000310015 EYA3Q99504 573 aa12.4□□□□□ -0.42
SP3-201ENST00000310015 USE1Q9NZ43 259 aa12.4□□□□□ -0.42
SP3-201ENST00000310015 YTHDC2Q9H6S0 1430 aaKnown RBP12.4□□□□□ -0.42
SP3-201ENST00000310015 TPD52L2O43399 206 aaKnown RBP12.4□□□□□ -0.42
SP3-201ENST00000310015 HAUS5O94927 633 aa12.4□□□□□ -0.42
SP3-201ENST00000310015 WASHC5Q12768 1159 aa12.4□□□□□ -0.42
SP3-201ENST00000310015 RSRC2Q7L4I2 434 aaKnown RBP12.4□□□□□ -0.42
SP3-201ENST00000310015 NEK8Q86SG6 692 aa12.4□□□□□ -0.42
SP3-201ENST00000310015 PASD1Q8IV76 773 aa12.4□□□□□ -0.42
SP3-201ENST00000310015 CNBD1Q8NA66 436 aa12.4□□□□□ -0.42
SP3-201ENST00000310015 IL17RAQ96F46 866 aa12.4□□□□□ -0.42
SP3-201ENST00000310015 TNKSO95271 1327 aa12.4□□□□□ -0.42
SP3-201ENST00000310015 FMNL1O95466 1100 aaPredicted RBP12.4□□□□□ -0.43
SP3-201ENST00000310015 CCDC103Q8IW40 242 aa12.4□□□□□ -0.43
SP3-201ENST00000310015 OR9Q1Q8NGQ5 310 aa12.4□□□□□ -0.43
SP3-201ENST00000310015 THAP11Q96EK4 314 aa12.4□□□□□ -0.43
SP3-201ENST00000310015 HEXIM2Q96MH2 286 aaKnown RBP12.4□□□□□ -0.43
SP3-201ENST00000310015 GGA1Q9UJY5 639 aa12.4□□□□□ -0.43
SP3-201ENST00000310015 PABPC4Q13310 644 aaKnown RBP eCLIP12.39□□□□□ -0.432e-6■□□□□ 9.8
SP3-201ENST00000310015 SPARCL1Q14515 664 aa12.39□□□□□ -0.43
SP3-201ENST00000310015 DNAJC24Q6P3W2 148 aa12.39□□□□□ -0.43
SP3-201ENST00000310015 ZNF589Q86UQ0 364 aaPredicted RBP12.39□□□□□ -0.43
SP3-201ENST00000310015 WDR75Q8IWA0 830 aaKnown RBP12.39□□□□□ -0.43
SP3-201ENST00000310015 HACE1Q8IYU2 909 aa12.39□□□□□ -0.43
SP3-201ENST00000310015 TEX12Q9BXU0 123 aa12.39□□□□□ -0.43
SP3-201ENST00000310015 BRD8Q9H0E9 1235 aa12.39□□□□□ -0.43
SP3-201ENST00000310015 CPSF3Q9UKF6 684 aaKnown RBP12.39□□□□□ -0.43
SP3-201ENST00000310015 SNX24Q9Y343 169 aa12.39□□□□□ -0.43
SP3-201ENST00000310015 ANO9A1A5B4 782 aa12.39□□□□□ -0.43
SP3-201ENST00000310015 GCP02774 474 aa12.39□□□□□ -0.43
SP3-201ENST00000310015 SIRT2Q8IXJ6 389 aa12.39□□□□□ -0.43
SP3-201ENST00000310015 SRRM1Q8IYB3 904 aaKnown RBP12.39□□□□□ -0.43
SP3-201ENST00000310015 CNBD2Q96M20 576 aa12.39□□□□□ -0.43
SP3-201ENST00000310015 STMN3Q9NZ72 180 aa12.39□□□□□ -0.43
SP3-201ENST00000310015 DENND4BO75064 1496 aaPredicted RBP12.39□□□□□ -0.43
SP3-201ENST00000310015 SH3TC1Q8TE82 1336 aa12.39□□□□□ -0.43
SP3-201ENST00000310015 CTIFO43310 598 aaKnown RBP12.39□□□□□ -0.43
SP3-201ENST00000310015 IRX1P78414 480 aaPredicted RBP12.39□□□□□ -0.43
SP3-201ENST00000310015 NT5C1BQ96P26 610 aa12.39□□□□□ -0.43
SP3-201ENST00000310015 NDEL1Q9GZM8 345 aa12.39□□□□□ -0.43
SP3-201ENST00000310015 KCNF1Q9H3M0 494 aa12.39□□□□□ -0.43
SP3-201ENST00000310015 PCDH11XQ9BZA7 1347 aa12.39□□□□□ -0.43
SP3-201ENST00000310015 PCDH11YQ9BZA8 1340 aa12.39□□□□□ -0.43
SP3-201ENST00000310015 PRPSAP2O60256 369 aa12.39□□□□□ -0.43
SP3-201ENST00000310015 ATP5HO75947 161 aa12.39□□□□□ -0.43
SP3-201ENST00000310015 NR2F2P24468 414 aa12.39□□□□□ -0.43
SP3-201ENST00000310015 POLR2BP30876 1174 aaKnown RBP12.39□□□□□ -0.43
SP3-201ENST00000310015 ARL4AP40617 200 aa12.39□□□□□ -0.43
SP3-201ENST00000310015 LMCD1Q9NZU5 365 aa12.39□□□□□ -0.43
SP3-201ENST00000310015 SEMA3EO15041 775 aa12.38□□□□□ -0.43
SP3-201ENST00000310015 PALMO75781 387 aa12.38□□□□□ -0.43
SP3-201ENST00000310015 KPNA2P52292 529 aaKnown RBP12.38□□□□□ -0.43
SP3-201ENST00000310015 COPS2P61201 443 aa12.38□□□□□ -0.43
SP3-201ENST00000310015 CENPUQ71F23 418 aa12.38□□□□□ -0.43
SP3-201ENST00000310015 CARD9Q9H257 536 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms