RNA–Protein interactions for RNA: ENST00000306853.1

CSPG4P2Y-201, Transcript of CSPG4 pseudogene 2 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P2Y, Length 795 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P2Y-201ENST00000306853 BMP2KQ9NSY1 1161 aaPredicted RBP12.27□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 GINS2Q9Y248 185 aa12.27□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 ATP6V1DQ9Y5K8 247 aa12.27□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 ARHGEF35A5YM69 484 aa12.26□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 PP2D1A8MPX8 630 aa12.26□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 NBNO60934 754 aa12.26□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 DGAT1O75907 488 aa12.26□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 VTNP04004 478 aa12.26□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 SPATA31C1P0DKV0 1188 aa12.26□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 GHRP10912 638 aa12.26□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 XRCC6P12956 609 aaKnown RBP eCLIP12.26□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 MARCKSP29966 332 aaPredicted RBP12.26□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 UBA7P41226 1012 aa12.26□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 RARRES1P49788 294 aa12.26□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 EPHB4P54760 987 aa12.26□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 EMC2Q15006 297 aa12.26□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 IL17AQ16552 155 aa12.26□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 TMEM240Q5SV17 173 aa12.26□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 ODR4Q5SWX8 454 aa12.26□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 ATL3Q6DD88 541 aa12.26□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 TSHZ1Q6ZSZ6 1077 aa12.26□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 OTOP2Q7RTS6 562 aa12.26□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 PIGOQ8TEQ8 1089 aa12.26□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 TCP11Q8WWU5 503 aa12.26□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 SEPT8Q92599 483 aa12.26□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 CALML4Q96GE6 196 aa12.26□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 PPP1R16BQ96T49 567 aa12.26□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 CELF4Q9BZC1 486 aaKnown RBP12.26□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 NT5C3AQ9H0P0 336 aa12.26□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 PRO3102Q9H379 93 aa12.26□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 DDX19AQ9NUU7 478 aaKnown RBP12.26□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 DBR1Q9UK59 544 aaKnown RBP12.26□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 CFAP45Q9UL16 551 aa12.26□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 KIAA1024Q9UPX6 916 aa12.26□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 SLC26A4O43511 780 aa12.25□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 USO1O60763 962 aaKnown RBP12.25□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 EFCAB14O75071 495 aa12.25□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 MAFO75444 373 aaPredicted RBP12.25□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 BAIAP3O94812 1187 aa12.25□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 YEATS4O95619 227 aa12.25□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 BRD1O95696 1058 aa12.25□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 CHRNA1P02708 482 aa12.25□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 CXCL10P02778 98 aa12.25□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 NCLP19338 710 aaKnown RBP12.25□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 CDC25AP30304 524 aa12.25□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 KCNJ6P48051 423 aa12.25□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 NASPP49321 788 aaPredicted RBP12.25□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 NUCB2P80303 420 aa12.25□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 CDC42EP1Q00587 391 aa12.25□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 SLC39A14Q15043 492 aa12.25□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 PTPAQ15257 358 aa12.25□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 SHHQ15465 462 aa12.25□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 KIZQ2M2Z5 673 aa12.25□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 C9orf50Q5SZB4 431 aa12.25□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 TRAF7Q6Q0C0 670 aa12.25□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 CABP7Q86V35 215 aa12.25□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 KIAA0319LQ8IZA0 1049 aa12.25□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 USP38Q8NB14 1042 aa12.25□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 NLRP7Q8WX94 980 aa12.25□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 PSPC1Q8WXF1 523 aaKnown RBP12.25□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 HERVK_113Q902F9 699 aa12.25□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 APBB2Q92870 758 aa12.25□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 IFIH1Q9BYX4 1025 aaKnown RBP12.25□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 DHX33Q9H6R0 707 aaKnown RBP12.25□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 DNM3Q9UQ16 869 aa12.25□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 SRPRBQ9Y5M8 271 aaKnown RBP12.25□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 IGKV6-21A0A0C4DH24 114 aa12.24□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 ZBTB39O15060 712 aa12.24□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 SPTLC2O15270 562 aa12.24□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 GPC3P51654 580 aa12.24□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 CRYBB1P53674 252 aaPredicted RBP12.24□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 NLRP11P59045 1033 aaKnown RBP12.24□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 KRT85P78386 507 aa12.24□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 PAK2Q13177 524 aa12.24□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 IKBKEQ14164 716 aa12.24□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 FBXO47Q5MNV8 452 aa12.24□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 RHPN2Q8IUC4 686 aa12.24□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 KCTD17Q8N5Z5 321 aa12.24□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 LINC01465Q8N7H1 131 aa12.24□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 KRI1Q8N9T8 703 aaKnown RBP12.24□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 LINC00301Q8NCQ3 95 aa12.24□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 MCPH1Q8NEM0 835 aa12.24□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 KCNG4Q8TDN1 519 aa12.24□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 NLRP4Q96MN2 994 aa12.24□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 CEP89Q96ST8 783 aa12.24□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 OSMRQ99650 979 aa12.24□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 BHMT2Q9H2M3 363 aa12.24□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 SUCLA2Q9P2R7 463 aaPredicted RBP12.24□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 TFIP11Q9UBB9 837 aaKnown RBP12.24□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 CCDC39Q9UFE4 941 aa12.24□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 SQORQ9Y6N5 450 aa12.24□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 MORC2Q9Y6X9 1032 aaPredicted RBP12.24□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 ABHD14A-ACY1A0A1B0GW23 586 aa12.23□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 PPP6R2O75170 966 aa12.23□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 RPS6KA5O75582 802 aa12.23□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 EYA4O95677 639 aa12.23□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 DNM1Q05193 864 aaKnown RBP12.23□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 LPIN1Q14693 890 aa12.23□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 MBTPS1Q14703 1052 aa12.23□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 ECM1Q16610 540 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms