RNA–Protein interactions for RNA: ENST00000306071.6

CHRNB1-201, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNB1, Length 2,557 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-201ENST00000306071 ATP4AP20648 1035 aa20.43■□□□□ 0.86
CHRNB1-201ENST00000306071 CTCFP49711 727 aaPredicted RBP20.43■□□□□ 0.86
CHRNB1-201ENST00000306071 UBAP2Q5T6F2 1119 aaKnown RBP20.43■□□□□ 0.86
CHRNB1-201ENST00000306071 NUGGCQ68CJ6 796 aa20.43■□□□□ 0.86
CHRNB1-201ENST00000306071 U2AF1L4Q8WU68 220 aaKnown RBP20.43■□□□□ 0.86
CHRNB1-201ENST00000306071 MCM9Q9NXL9 1143 aa20.43■□□□□ 0.86
CHRNB1-201ENST00000306071 RPTORQ8N122 1335 aa20.43■□□□□ 0.86
CHRNB1-201ENST00000306071 USP17L3A6NCW0 530 aa20.43■□□□□ 0.86
CHRNB1-201ENST00000306071 USP17L4A6NCW7 530 aa20.43■□□□□ 0.86
CHRNB1-201ENST00000306071 IL2RBP14784 551 aa20.43■□□□□ 0.86
CHRNB1-201ENST00000306071 SUSD4Q5VX71 490 aa20.43■□□□□ 0.86
CHRNB1-201ENST00000306071 SLC30A9Q6PML9 568 aa20.43■□□□□ 0.86
CHRNB1-201ENST00000306071 USP17L1Q7RTZ2 530 aa20.43■□□□□ 0.86
CHRNB1-201ENST00000306071 JAMLQ86YT9 394 aa20.43■□□□□ 0.86
CHRNB1-201ENST00000306071 ATP8A2Q9NTI2 1148 aa20.43■□□□□ 0.86
CHRNB1-201ENST00000306071 RASAL2Q9UJF2 1139 aa20.43■□□□□ 0.86
CHRNB1-201ENST00000306071 TTC7AQ9ULT0 858 aaPredicted RBP20.43■□□□□ 0.86
CHRNB1-201ENST00000306071 COL1A1P02452 1464 aaPredicted RBP20.43■□□□□ 0.86
CHRNB1-201ENST00000306071 ZNF804BA4D1E1 1349 aa20.43■□□□□ 0.86
CHRNB1-201ENST00000306071 A0A0A6YYK5 440 aaPredicted RBP20.42■□□□□ 0.86
CHRNB1-201ENST00000306071 MPHOSPH10O00566 681 aaKnown RBP20.42■□□□□ 0.86
CHRNB1-201ENST00000306071 HIP1RO75146 1068 aa20.42■□□□□ 0.86
CHRNB1-201ENST00000306071 FGFR4P22455 802 aa20.42■□□□□ 0.86
CHRNB1-201ENST00000306071 FXR2P51116 673 aaKnown RBP eCLIP20.42■□□□□ 0.86
CHRNB1-201ENST00000306071 MARSP56192 900 aaKnown RBP20.42■□□□□ 0.86
CHRNB1-201ENST00000306071 PPP2R5EQ16537 467 aa20.42■□□□□ 0.86
CHRNB1-201ENST00000306071 ZDHHC24Q6UX98 284 aa20.42■□□□□ 0.86
CHRNB1-201ENST00000306071 ZNF34Q8IZ26 560 aa20.42■□□□□ 0.86
CHRNB1-201ENST00000306071 PIGBQ92521 554 aa20.42■□□□□ 0.86
CHRNB1-201ENST00000306071 MTMR9Q96QG7 549 aa20.42■□□□□ 0.86
CHRNB1-201ENST00000306071 NAP1L3Q99457 506 aaPredicted RBP20.42■□□□□ 0.86
CHRNB1-201ENST00000306071 ERVK-5Q9HDB9 667 aa20.42■□□□□ 0.86
CHRNB1-201ENST00000306071 CNOT7Q9UIV1 285 aaKnown RBP20.42■□□□□ 0.86
CHRNB1-201ENST00000306071 STX8Q9UNK0 236 aa20.42■□□□□ 0.86
CHRNB1-201ENST00000306071 ARL2BPQ9Y2Y0 163 aa20.42■□□□□ 0.86
CHRNB1-201ENST00000306071 NUP98P52948 1817 aa20.42■□□□□ 0.86
CHRNB1-201ENST00000306071 FAM187AA6NFU0 413 aa20.42■□□□□ 0.86
CHRNB1-201ENST00000306071 KLRF2D3W0D1 207 aa20.42■□□□□ 0.86
CHRNB1-201ENST00000306071 CCNG1P51959 295 aa20.42■□□□□ 0.86
CHRNB1-201ENST00000306071 MKRN4PQ13434 485 aaPredicted RBP20.42■□□□□ 0.86
CHRNB1-201ENST00000306071 FITM2Q8N6M3 262 aa20.42■□□□□ 0.86
CHRNB1-201ENST00000306071 TEX9Q8N6V9 391 aa20.42■□□□□ 0.86
CHRNB1-201ENST00000306071 RBM46Q8TBY0 533 aaKnown RBP20.42■□□□□ 0.86
CHRNB1-201ENST00000306071 DNAJC19Q96DA6 116 aa20.42■□□□□ 0.86
CHRNB1-201ENST00000306071 OSGEPQ9NPF4 335 aa20.42■□□□□ 0.86
CHRNB1-201ENST00000306071 BMP2KQ9NSY1 1161 aaPredicted RBP20.42■□□□□ 0.86
CHRNB1-201ENST00000306071 TMEM260Q9NX78 707 aa20.42■□□□□ 0.86
CHRNB1-201ENST00000306071 HDAC9Q9UKV0 1011 aa20.42■□□□□ 0.86
CHRNB1-201ENST00000306071 KIAA0391O15091 583 aaKnown RBP20.41■□□□□ 0.86
CHRNB1-201ENST00000306071 AHCYL1O43865 530 aa20.41■□□□□ 0.86
CHRNB1-201ENST00000306071 FESP07332 822 aa20.41■□□□□ 0.86
CHRNB1-201ENST00000306071 USP17L8P0C7I0 530 aa20.41■□□□□ 0.86
CHRNB1-201ENST00000306071 GNPTABQ3T906 1256 aa20.41■□□□□ 0.86
CHRNB1-201ENST00000306071 CAVIN4Q5BKX8 364 aa20.41■□□□□ 0.86
CHRNB1-201ENST00000306071 OTUD6AQ7L8S5 288 aa20.41■□□□□ 0.86
CHRNB1-201ENST00000306071 SPATA21Q7Z572 469 aa20.41■□□□□ 0.86
CHRNB1-201ENST00000306071 REXO1Q8N1G1 1221 aaKnown RBP20.41■□□□□ 0.86
CHRNB1-201ENST00000306071 TSC22D3Q99576 134 aa20.41■□□□□ 0.86
CHRNB1-201ENST00000306071 RXFP1Q9HBX9 757 aa20.41■□□□□ 0.86
CHRNB1-201ENST00000306071 MTRF1LQ9UGC7 380 aaKnown RBP20.41■□□□□ 0.86
CHRNB1-201ENST00000306071 PPP1R9AQ9ULJ8 1098 aa20.41■□□□□ 0.86
CHRNB1-201ENST00000306071 CETN3O15182 167 aa20.41■□□□□ 0.86
CHRNB1-201ENST00000306071 SMIM24O75264 130 aa20.41■□□□□ 0.86
CHRNB1-201ENST00000306071 MECOMQ03112 1051 aa20.41■□□□□ 0.86
CHRNB1-201ENST00000306071 ZNF211Q13398 564 aaPredicted RBP20.41■□□□□ 0.86
CHRNB1-201ENST00000306071 AUHQ13825 339 aaKnown RBP20.41■□□□□ 0.86
CHRNB1-201ENST00000306071 DHX34Q14147 1143 aaKnown RBP20.41■□□□□ 0.86
CHRNB1-201ENST00000306071 EXOC3L4Q17RC7 722 aa20.41■□□□□ 0.86
CHRNB1-201ENST00000306071 DCAF12L1Q5VU92 463 aa20.41■□□□□ 0.86
CHRNB1-201ENST00000306071 ASRGL1Q7L266 308 aa20.41■□□□□ 0.86
CHRNB1-201ENST00000306071 TBC1D16Q8TBP0 767 aa20.41■□□□□ 0.86
CHRNB1-201ENST00000306071 TRIM7Q9C029 511 aa20.41■□□□□ 0.86
CHRNB1-201ENST00000306071 MKNK2Q9HBH9 465 aa20.41■□□□□ 0.86
CHRNB1-201ENST00000306071 VAT1LQ9HCJ6 419 aa20.41■□□□□ 0.86
CHRNB1-201ENST00000306071 SLC37A4O43826 429 aa20.41■□□□□ 0.86
CHRNB1-201ENST00000306071 GBP1P32455 592 aa20.41■□□□□ 0.86
CHRNB1-201ENST00000306071 NPEPPSP55786 919 aa20.41■□□□□ 0.86
CHRNB1-201ENST00000306071 BARGINQ6ZT62 677 aa20.41■□□□□ 0.86
CHRNB1-201ENST00000306071 NSUN4Q96CB9 384 aaKnown RBP20.41■□□□□ 0.86
CHRNB1-201ENST00000306071 O00370 1275 aa20.4■□□□□ 0.86
CHRNB1-201ENST00000306071 ADAMTS2O95450 1211 aa20.4■□□□□ 0.86
CHRNB1-201ENST00000306071 GALCP54803 685 aa20.4■□□□□ 0.86
CHRNB1-201ENST00000306071 MAPK7Q13164 816 aa20.4■□□□□ 0.86
CHRNB1-201ENST00000306071 DYNLL2Q96FJ2 89 aa20.4■□□□□ 0.86
CHRNB1-201ENST00000306071 PLCD4Q9BRC7 762 aa20.4■□□□□ 0.86
CHRNB1-201ENST00000306071 MLXIPLQ9NP71 852 aa20.4■□□□□ 0.86
CHRNB1-201ENST00000306071 FAM170AA1A519 330 aa20.4■□□□□ 0.86
CHRNB1-201ENST00000306071 DPPA5A6NC42 116 aa20.4■□□□□ 0.86
CHRNB1-201ENST00000306071 PALM3A6NDB9 673 aaPredicted RBP20.4■□□□□ 0.86
CHRNB1-201ENST00000306071 ERVV-1B6SEH8 477 aa20.4■□□□□ 0.86
CHRNB1-201ENST00000306071 TSPY3P0CV98 308 aa20.4■□□□□ 0.86
CHRNB1-201ENST00000306071 TSPY8P0CW00 308 aa20.4■□□□□ 0.86
CHRNB1-201ENST00000306071 CYP19A1P11511 503 aaPredicted RBP20.4■□□□□ 0.86
CHRNB1-201ENST00000306071 PON1P27169 355 aa20.4■□□□□ 0.86
CHRNB1-201ENST00000306071 PRKCIP41743 596 aa20.4■□□□□ 0.86
CHRNB1-201ENST00000306071 CACNB1Q02641 598 aaPredicted RBP20.4■□□□□ 0.86
CHRNB1-201ENST00000306071 SNX1Q13596 522 aa20.4■□□□□ 0.86
CHRNB1-201ENST00000306071 SBK1Q52WX2 424 aa20.4■□□□□ 0.86
CHRNB1-201ENST00000306071 HERC4Q5GLZ8 1057 aaPredicted RBP20.4■□□□□ 0.86
CHRNB1-201ENST00000306071 BTNL9Q6UXG8 535 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms