RNA–Protein interactions for RNA: ENST00000305409.2

SCG2-201, Transcript of secretogranin II, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCG2, Length 2,576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2-201ENST00000305409 FOXR2Q6PJQ5 311 aa12.49□□□□□ -0.41
SCG2-201ENST00000305409 EEPD1Q7L9B9 569 aa12.49□□□□□ -0.41
SCG2-201ENST00000305409 NIPA1Q7RTP0 329 aa12.49□□□□□ -0.41
SCG2-201ENST00000305409 FRMD5Q7Z6J6 570 aa12.49□□□□□ -0.41
SCG2-201ENST00000305409 CAPZA3Q96KX2 299 aa12.49□□□□□ -0.41
SCG2-201ENST00000305409 C12orf42Q96LP6 360 aa12.49□□□□□ -0.41
SCG2-201ENST00000305409 SYT17Q9BSW7 474 aa12.49□□□□□ -0.41
SCG2-201ENST00000305409 GBP3Q9H0R5 595 aa12.49□□□□□ -0.41
SCG2-201ENST00000305409 HAUS4Q9H6D7 363 aa12.49□□□□□ -0.41
SCG2-201ENST00000305409 ACAD9Q9H845 621 aa12.49□□□□□ -0.41
SCG2-201ENST00000305409 BTBD7Q9P203 1132 aa12.49□□□□□ -0.41
SCG2-201ENST00000305409 CEP72Q9P209 647 aa12.49□□□□□ -0.41
SCG2-201ENST00000305409 SALL4Q9UJQ4 1053 aa12.49□□□□□ -0.41
SCG2-201ENST00000305409 ADAMTS5Q9UNA0 930 aa12.49□□□□□ -0.41
SCG2-201ENST00000305409 CENPFP49454 3210 aa12.49□□□□□ -0.41
SCG2-201ENST00000305409 ZNF862O60290 1169 aa12.48□□□□□ -0.41
SCG2-201ENST00000305409 MOCS3O95396 460 aa12.48□□□□□ -0.41
SCG2-201ENST00000305409 GUCY2CP25092 1073 aa12.48□□□□□ -0.41
SCG2-201ENST00000305409 RPL13P26373 211 aaKnown RBP12.48□□□□□ -0.41
SCG2-201ENST00000305409 HNRNPH3P31942 346 aaKnown RBP12.48□□□□□ -0.41
SCG2-201ENST00000305409 SP2Q02086 613 aa12.48□□□□□ -0.41
SCG2-201ENST00000305409 SEPT14Q6ZU15 432 aa12.48□□□□□ -0.41
SCG2-201ENST00000305409 ANO5Q75V66 913 aa12.48□□□□□ -0.41
SCG2-201ENST00000305409 ANKRD35Q8N283 1001 aa12.48□□□□□ -0.41
SCG2-201ENST00000305409 NSUN6Q8TEA1 469 aaKnown RBP12.48□□□□□ -0.41
SCG2-201ENST00000305409 PSMB7Q99436 277 aa12.48□□□□□ -0.41
SCG2-201ENST00000305409 CBWD1Q9BRT8 395 aa12.48□□□□□ -0.41
SCG2-201ENST00000305409 GANQ9H2C0 597 aa12.48□□□□□ -0.41
SCG2-201ENST00000305409 HOXC10Q9NYD6 342 aa12.48□□□□□ -0.41
SCG2-201ENST00000305409 CDC23Q9UJX2 597 aa12.48□□□□□ -0.41
SCG2-201ENST00000305409 FAM184BQ9ULE4 1060 aa12.48□□□□□ -0.41
SCG2-201ENST00000305409 USP20Q9Y2K6 914 aa12.48□□□□□ -0.41
SCG2-201ENST00000305409 A0A0U1RQG5 324 aaPredicted RBP12.48□□□□□ -0.41
SCG2-201ENST00000305409 WDR64B1ANS9 1081 aa12.48□□□□□ -0.41
SCG2-201ENST00000305409 BUB1O43683 1085 aa12.48□□□□□ -0.41
SCG2-201ENST00000305409 CBX1P83916 185 aa12.48□□□□□ -0.41
SCG2-201ENST00000305409 KIF5AQ12840 1032 aa12.48□□□□□ -0.41
SCG2-201ENST00000305409 HS2ST1Q7LGA3 356 aa12.48□□□□□ -0.41
SCG2-201ENST00000305409 TEX2Q8IWB9 1127 aa12.48□□□□□ -0.41
SCG2-201ENST00000305409 ADARB2Q9NS39 739 aaKnown RBP12.48□□□□□ -0.41
SCG2-201ENST00000305409 RNF216Q9NWF9 866 aaPredicted RBP12.48□□□□□ -0.41
SCG2-201ENST00000305409 GCNT4Q9P109 453 aa12.48□□□□□ -0.41
SCG2-201ENST00000305409 ADAMTS1Q9UHI8 967 aa12.48□□□□□ -0.41
SCG2-201ENST00000305409 ODF2LQ9ULJ1 636 aa12.48□□□□□ -0.41
SCG2-201ENST00000305409 CSADQ9Y600 493 aa12.48□□□□□ -0.41
SCG2-201ENST00000305409 CAPN6Q9Y6Q1 641 aa12.48□□□□□ -0.41
SCG2-201ENST00000305409 GOLGA8IPA6NC78 632 aa12.47□□□□□ -0.41
SCG2-201ENST00000305409 GOLGA8JA6NMD2 632 aa12.47□□□□□ -0.41
SCG2-201ENST00000305409 CCDC169A6NNP5 214 aa12.47□□□□□ -0.41
SCG2-201ENST00000305409 ZNF185O15231 689 aa12.47□□□□□ -0.41
SCG2-201ENST00000305409 EIF3DO15371 548 aaKnown RBP eCLIP12.47□□□□□ -0.41
SCG2-201ENST00000305409 KRT86O43790 486 aa12.47□□□□□ -0.41
SCG2-201ENST00000305409 EXOC3O60645 756 aa12.47□□□□□ -0.41
SCG2-201ENST00000305409 UCHL3P15374 230 aa12.47□□□□□ -0.41
SCG2-201ENST00000305409 ZSCAN20P17040 1043 aaPredicted RBP12.47□□□□□ -0.41
SCG2-201ENST00000305409 HOXA7P31268 230 aaPredicted RBP12.47□□□□□ -0.41
SCG2-201ENST00000305409 MAGEA1P43355 309 aa12.47□□□□□ -0.41
SCG2-201ENST00000305409 VAV2P52735 878 aa12.47□□□□□ -0.41
SCG2-201ENST00000305409 PSMC5P62195 406 aa12.47□□□□□ -0.41
SCG2-201ENST00000305409 DLG4P78352 724 aa12.47□□□□□ -0.41
SCG2-201ENST00000305409 CBWD6Q4V339 395 aa12.47□□□□□ -0.41
SCG2-201ENST00000305409 CBWD3Q5JTY5 395 aa12.47□□□□□ -0.41
SCG2-201ENST00000305409 CBWD5Q5RIA9 395 aa12.47□□□□□ -0.41
SCG2-201ENST00000305409 DPY19L2P1Q6NXN4 242 aa12.47□□□□□ -0.41
SCG2-201ENST00000305409 ZNF526Q8TF50 670 aaPredicted RBP12.47□□□□□ -0.41
SCG2-201ENST00000305409 ELMO3Q96BJ8 720 aa12.47□□□□□ -0.41
SCG2-201ENST00000305409 PACSIN1Q9BY11 444 aa12.47□□□□□ -0.41
SCG2-201ENST00000305409 CGNQ9P2M7 1197 aaKnown RBP12.47□□□□□ -0.41
SCG2-201ENST00000305409 DOCK1Q14185 1865 aa12.47□□□□□ -0.41
SCG2-201ENST00000305409 PPP1R12BO60237 982 aaPredicted RBP12.47□□□□□ -0.41
SCG2-201ENST00000305409 SEC31AO94979 1220 aaKnown RBP12.47□□□□□ -0.41
SCG2-201ENST00000305409 KCNA2P16389 499 aa12.47□□□□□ -0.41
SCG2-201ENST00000305409 PSMC2P35998 433 aaKnown RBP12.47□□□□□ -0.41
SCG2-201ENST00000305409 DNA2P51530 1060 aa12.47□□□□□ -0.41
SCG2-201ENST00000305409 CHMP4BP1P59074 171 aa12.47□□□□□ -0.41
SCG2-201ENST00000305409 KLHDC7AQ5VTJ3 777 aa12.47□□□□□ -0.41
SCG2-201ENST00000305409 CYFIP1Q7L576 1253 aa12.47□□□□□ -0.41
SCG2-201ENST00000305409 NCAPG2Q86XI2 1143 aa12.47□□□□□ -0.41
SCG2-201ENST00000305409 RBM46Q8TBY0 533 aaKnown RBP12.47□□□□□ -0.41
SCG2-201ENST00000305409 BORCS6Q96GS4 357 aa12.47□□□□□ -0.41
SCG2-201ENST00000305409 INPP4AQ96PE3 977 aaPredicted RBP12.47□□□□□ -0.41
SCG2-201ENST00000305409 SPAG5Q96R06 1193 aa12.47□□□□□ -0.41
SCG2-201ENST00000305409 MOV10L1Q9BXT6 1211 aaKnown RBP12.47□□□□□ -0.41
SCG2-201ENST00000305409 MAP3K20Q9NYL2 800 aaKnown RBP12.47□□□□□ -0.41
SCG2-201ENST00000305409 COL11A1P12107 1806 aaPredicted RBP12.47□□□□□ -0.41
SCG2-201ENST00000305409 EFCAB8A8MWE9 144 aa12.46□□□□□ -0.41
SCG2-201ENST00000305409 CLCN6P51797 869 aa12.46□□□□□ -0.41
SCG2-201ENST00000305409 NAP1L1P55209 391 aaKnown RBP12.46□□□□□ -0.41
SCG2-201ENST00000305409 CDK17Q00537 523 aa12.46□□□□□ -0.41
SCG2-201ENST00000305409 KLHL30Q0D2K2 578 aa12.46□□□□□ -0.41
SCG2-201ENST00000305409 ASTE1Q2TB18 679 aaPredicted RBP12.46□□□□□ -0.41
SCG2-201ENST00000305409 SLC9C1Q4G0N8 1177 aa12.46□□□□□ -0.41
SCG2-201ENST00000305409 EAPPQ56P03 285 aaPredicted RBP12.46□□□□□ -0.41
SCG2-201ENST00000305409 CCDC60Q8IWA6 550 aaPredicted RBP12.46□□□□□ -0.41
SCG2-201ENST00000305409 NEK9Q8TD19 979 aa12.46□□□□□ -0.41
SCG2-201ENST00000305409 FAM84AQ96KN4 292 aa12.46□□□□□ -0.41
SCG2-201ENST00000305409 CEP170P1Q96L14 293 aa12.46□□□□□ -0.41
SCG2-201ENST00000305409 HINFPQ9BQA5 517 aa12.46□□□□□ -0.41
SCG2-201ENST00000305409 ZNF446Q9NWS9 450 aa12.46□□□□□ -0.41
SCG2-201ENST00000305409 LARSQ9P2J5 1176 aaKnown RBP12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms