RNA–Protein interactions for RNA: ENST00000300107.7

CLPX-201, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPX, Length 4,695 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-201ENST00000300107 FAM149B1Q96BN6 582 aa13.75□□□□□ -0.21
CLPX-201ENST00000300107 GRAMD1AQ96CP6 724 aa13.75□□□□□ -0.21
CLPX-201ENST00000300107 TTC25Q96NG3 672 aa13.75□□□□□ -0.21
CLPX-201ENST00000300107 MED10Q9BTT4 135 aa13.75□□□□□ -0.21
CLPX-201ENST00000300107 AMACRQ9UHK6 382 aa13.75□□□□□ -0.21
CLPX-201ENST00000300107 CDR2Q01850 454 aa13.74□□□□□ -0.21
CLPX-201ENST00000300107 LRRC14Q15048 493 aa13.74□□□□□ -0.21
CLPX-201ENST00000300107 TBC1D9BQ66K14 1250 aa13.74□□□□□ -0.21
CLPX-201ENST00000300107 KRT27Q7Z3Y8 459 aa13.74□□□□□ -0.21
CLPX-201ENST00000300107 SEPT9Q9UHD8 586 aaPredicted RBP13.74□□□□□ -0.21
CLPX-201ENST00000300107 SYNJ2BP-COX16A0A087WUM0 186 aa13.74□□□□□ -0.21
CLPX-201ENST00000300107 ZNF185O15231 689 aa13.74□□□□□ -0.21
CLPX-201ENST00000300107 RAD23BP54727 409 aa13.74□□□□□ -0.21
CLPX-201ENST00000300107 PRPSAP1Q14558 356 aa13.74□□□□□ -0.21
CLPX-201ENST00000300107 HACE1Q8IYU2 909 aa13.74□□□□□ -0.21
CLPX-201ENST00000300107 HNRNPLLQ8WVV9 542 aaKnown RBP13.74□□□□□ -0.21
CLPX-201ENST00000300107 HEMGNQ9BXL5 484 aa13.74□□□□□ -0.21
CLPX-201ENST00000300107 COX16Q9P0S2 106 aa13.74□□□□□ -0.21
CLPX-201ENST00000300107 AXIN2Q9Y2T1 843 aa13.74□□□□□ -0.21
CLPX-201ENST00000300107 ITIH6Q6UXX5 1313 aa13.74□□□□□ -0.21
CLPX-201ENST00000300107 SFI1A8K8P3 1242 aa13.74□□□□□ -0.21
CLPX-201ENST00000300107 CREB3O43889 395 aa13.74□□□□□ -0.21
CLPX-201ENST00000300107 CDK8P49336 464 aa13.74□□□□□ -0.21
CLPX-201ENST00000300107 COASYQ13057 564 aa13.74□□□□□ -0.21
CLPX-201ENST00000300107 SFR1Q86XK3 245 aa13.74□□□□□ -0.21
CLPX-201ENST00000300107 MORC4Q8TE76 937 aa13.74□□□□□ -0.21
CLPX-201ENST00000300107 RAD54LQ92698 747 aa13.74□□□□□ -0.21
CLPX-201ENST00000300107 DYDC2Q96IM9 177 aa13.74□□□□□ -0.21
CLPX-201ENST00000300107 DCTN4Q9UJW0 460 aa13.74□□□□□ -0.21
CLPX-201ENST00000300107 HPCAL4Q9UM19 191 aa13.74□□□□□ -0.21
CLPX-201ENST00000300107 TARBP1Q13395 1621 aaKnown RBP13.74□□□□□ -0.21
CLPX-201ENST00000300107 SAMD9LQ8IVG5 1584 aa13.73□□□□□ -0.21
CLPX-201ENST00000300107 PFDN6O15212 129 aa13.73□□□□□ -0.21
CLPX-201ENST00000300107 ITKQ08881 620 aa13.73□□□□□ -0.21
CLPX-201ENST00000300107 PDXDC1Q6P996 788 aa13.73□□□□□ -0.21
CLPX-201ENST00000300107 RBM41Q96IZ5 413 aaKnown RBP13.73□□□□□ -0.21
CLPX-201ENST00000300107 NUDCD1Q96RS6 583 aa13.73□□□□□ -0.21
CLPX-201ENST00000300107 OSBPL1AQ9BXW6 950 aa13.73□□□□□ -0.21
CLPX-201ENST00000300107 CXorf56Q9H5V9 222 aa13.73□□□□□ -0.21
CLPX-201ENST00000300107 ADAM22Q9P0K1 906 aa13.73□□□□□ -0.21
CLPX-201ENST00000300107 ABCA8O94911 1581 aa13.73□□□□□ -0.21
CLPX-201ENST00000300107 LOC102724159A0A0B4J2E5 919 aa13.73□□□□□ -0.21
CLPX-201ENST00000300107 ZBED1O96006 694 aa13.73□□□□□ -0.21
CLPX-201ENST00000300107 PWP2Q15269 919 aaKnown RBP13.73□□□□□ -0.21
CLPX-201ENST00000300107 SEPT12Q8IYM1 358 aa13.73□□□□□ -0.21
CLPX-201ENST00000300107 IPO11Q9UI26 975 aaKnown RBP13.73□□□□□ -0.21
CLPX-201ENST00000300107 PP2D1A8MPX8 630 aa13.73□□□□□ -0.21
CLPX-201ENST00000300107 MED7O43513 233 aa13.73□□□□□ -0.21
CLPX-201ENST00000300107 RAD17O75943 681 aa13.73□□□□□ -0.21
CLPX-201ENST00000300107 EEF1B2P24534 225 aaKnown RBP13.73□□□□□ -0.21
CLPX-201ENST00000300107 ABCD1P33897 745 aa13.73□□□□□ -0.21
CLPX-201ENST00000300107 ARL4AP40617 200 aa13.73□□□□□ -0.21
CLPX-201ENST00000300107 KPNA2P52292 529 aaKnown RBP13.73□□□□□ -0.21
CLPX-201ENST00000300107 TFAMQ00059 246 aaKnown RBP13.73□□□□□ -0.21
CLPX-201ENST00000300107 C1orf146Q5VVC0 180 aa13.73□□□□□ -0.21
CLPX-201ENST00000300107 DPY19L2Q6NUT2 758 aa13.73□□□□□ -0.21
CLPX-201ENST00000300107 CFAP36Q96G28 342 aa13.73□□□□□ -0.21
CLPX-201ENST00000300107 ANKRD36BP1Q96IX9 119 aa13.73□□□□□ -0.21
CLPX-201ENST00000300107 UPF3AQ9H1J1 476 aaKnown RBP13.73□□□□□ -0.21
CLPX-201ENST00000300107 ANLNQ9NQW6 1124 aa13.73□□□□□ -0.21
CLPX-201ENST00000300107 APOBEC2Q9Y235 224 aaKnown RBP13.73□□□□□ -0.21
CLPX-201ENST00000300107 GOLGA8IPA6NC78 632 aa13.73□□□□□ -0.21
CLPX-201ENST00000300107 GOLGA8JA6NMD2 632 aa13.73□□□□□ -0.21
CLPX-201ENST00000300107 PPEF1O14829 653 aaPredicted RBP13.73□□□□□ -0.21
CLPX-201ENST00000300107 KRT38O76015 456 aa13.73□□□□□ -0.21
CLPX-201ENST00000300107 RXRBP28702 533 aa13.73□□□□□ -0.21
CLPX-201ENST00000300107 MKRN3Q13064 507 aaKnown RBP13.73□□□□□ -0.21
CLPX-201ENST00000300107 DYNC1I2Q13409 638 aaKnown RBP13.73□□□□□ -0.21
CLPX-201ENST00000300107 DHX34Q14147 1143 aaKnown RBP13.73□□□□□ -0.21
CLPX-201ENST00000300107 CTTNQ14247 550 aaKnown RBP13.73□□□□□ -0.21
CLPX-201ENST00000300107 GPR101Q96P66 508 aaPredicted RBP13.73□□□□□ -0.21
CLPX-201ENST00000300107 BATF3Q9NR55 127 aa13.73□□□□□ -0.21
CLPX-201ENST00000300107 NXF1Q9UBU9 619 aaKnown RBP13.73□□□□□ -0.21
CLPX-201ENST00000300107 USP42Q9H9J4 1324 aaKnown RBP13.73□□□□□ -0.21
CLPX-201ENST00000300107 TTI1O43156 1089 aa13.72□□□□□ -0.21
CLPX-201ENST00000300107 PRPSAP2O60256 369 aa13.72□□□□□ -0.21
CLPX-201ENST00000300107 ORC2Q13416 577 aaPredicted RBP13.72□□□□□ -0.21
CLPX-201ENST00000300107 SPOPLQ6IQ16 392 aa13.72□□□□□ -0.21
CLPX-201ENST00000300107 TRIM59Q8IWR1 403 aa13.72□□□□□ -0.21
CLPX-201ENST00000300107 NOA1Q8NC60 698 aaKnown RBP13.72□□□□□ -0.21
CLPX-201ENST00000300107 CEP70Q8NHQ1 597 aa13.72□□□□□ -0.21
CLPX-201ENST00000300107 E9PMD0 336 aa13.72□□□□□ -0.21
CLPX-201ENST00000300107 ARFIP2P53365 341 aa13.72□□□□□ -0.21
CLPX-201ENST00000300107 CORO7P57737 925 aa13.72□□□□□ -0.21
CLPX-201ENST00000300107 KNOP1Q1ED39 458 aaKnown RBP13.72□□□□□ -0.21
CLPX-201ENST00000300107 CCDC137Q6PK04 289 aaKnown RBP13.72□□□□□ -0.21
CLPX-201ENST00000300107 RFFLQ8WZ73 363 aa13.72□□□□□ -0.21
CLPX-201ENST00000300107 TMEM47Q9BQJ4 181 aa13.72□□□□□ -0.21
CLPX-201ENST00000300107 ZNF233A6NK53 670 aa13.72□□□□□ -0.21
CLPX-201ENST00000300107 RASSF10A6NK89 507 aa13.72□□□□□ -0.21
CLPX-201ENST00000300107 SRGAP2BP0DMP2 458 aa13.72□□□□□ -0.21
CLPX-201ENST00000300107 ELF1P32519 619 aa13.72□□□□□ -0.21
CLPX-201ENST00000300107 LSP1P33241 339 aa13.72□□□□□ -0.21
CLPX-201ENST00000300107 DRAP1Q14919 205 aaPredicted RBP13.72□□□□□ -0.21
CLPX-201ENST00000300107 RAB44Q7Z6P3 723 aaPredicted RBP13.72□□□□□ -0.21
CLPX-201ENST00000300107 SULF1Q8IWU6 871 aa13.72□□□□□ -0.21
CLPX-201ENST00000300107 NRBF2Q96F24 287 aa13.72□□□□□ -0.21
CLPX-201ENST00000300107 AS3MTQ9HBK9 375 aa13.72□□□□□ -0.21
CLPX-201ENST00000300107 HLFQ16534 295 aa13.72□□□□□ -0.21
CLPX-201ENST00000300107 SUSD4Q5VX71 490 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms