RNA–Protein interactions for RNA: ENST00000298173.7

GTF2A1-201, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 2

Gene GTF2A1, Length 1,677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-201ENST00000298173 PPME1Q9Y570 386 aa27.27■■□□□ 1.96
GTF2A1-201ENST00000298173 PSMA7O14818 248 aa27.26■■□□□ 1.95
GTF2A1-201ENST00000298173 AKR1A1P14550 325 aa27.26■■□□□ 1.95
GTF2A1-201ENST00000298173 STX17P56962 302 aa27.26■■□□□ 1.95
GTF2A1-201ENST00000298173 LRRC41Q15345 812 aa27.26■■□□□ 1.95
GTF2A1-201ENST00000298173 SPATA1Q5VX52 437 aa27.26■■□□□ 1.95
GTF2A1-201ENST00000298173 CENPPQ6IPU0 288 aa27.26■■□□□ 1.95
GTF2A1-201ENST00000298173 ZBTB42B2RXF5 422 aa27.25■■□□□ 1.95
GTF2A1-201ENST00000298173 AP5Z1O43299 807 aa27.25■■□□□ 1.95
GTF2A1-201ENST00000298173 CCNE1P24864 410 aa27.25■■□□□ 1.95
GTF2A1-201ENST00000298173 PMS1P54277 932 aaKnown RBP27.25■■□□□ 1.95
GTF2A1-201ENST00000298173 CACNB2Q08289 660 aaPredicted RBP27.25■■□□□ 1.95
GTF2A1-201ENST00000298173 TRIM32Q13049 653 aa27.25■■□□□ 1.95
GTF2A1-201ENST00000298173 DGKDQ16760 1214 aa27.25■■□□□ 1.95
GTF2A1-201ENST00000298173 MAEAQ7L5Y9 396 aa27.25■■□□□ 1.95
GTF2A1-201ENST00000298173 TLK2Q86UE8 772 aa27.25■■□□□ 1.95
GTF2A1-201ENST00000298173 MYOCDQ8IZQ8 938 aa27.25■■□□□ 1.95
GTF2A1-201ENST00000298173 SCFD1Q8WVM8 642 aa27.25■■□□□ 1.95
GTF2A1-201ENST00000298173 RNPEPQ9H4A4 650 aa27.25■■□□□ 1.95
GTF2A1-201ENST00000298173 FANCLQ9NW38 375 aa27.25■■□□□ 1.95
GTF2A1-201ENST00000298173 MARK3P27448 753 aa27.24■■□□□ 1.95
GTF2A1-201ENST00000298173 CASP5P51878 434 aa27.24■■□□□ 1.95
GTF2A1-201ENST00000298173 MCPH1Q8NEM0 835 aa27.24■■□□□ 1.95
GTF2A1-201ENST00000298173 LENG1Q96BZ8 264 aaPredicted RBP27.24■■□□□ 1.95
GTF2A1-201ENST00000298173 DRC1Q96MC2 740 aa27.24■■□□□ 1.95
GTF2A1-201ENST00000298173 SEMA6BQ9H3T3 888 aa27.24■■□□□ 1.95
GTF2A1-201ENST00000298173 GPRC5CQ9NQ84 441 aa27.24■■□□□ 1.95
GTF2A1-201ENST00000298173 NFE2L3Q9Y4A8 694 aa27.24■■□□□ 1.95
GTF2A1-201ENST00000298173 SYNRGQ9UMZ2 1314 aa27.24■■□□□ 1.95
GTF2A1-201ENST00000298173 HBP1O60381 514 aa27.24■■□□□ 1.95
GTF2A1-201ENST00000298173 DUSP11O75319 330 aaKnown RBP27.24■■□□□ 1.95
GTF2A1-201ENST00000298173 PLS3P13797 630 aa27.24■■□□□ 1.95
GTF2A1-201ENST00000298173 TTI2Q6NXR4 508 aa27.24■■□□□ 1.95
GTF2A1-201ENST00000298173 ZNF720Q7Z2F6 126 aa27.24■■□□□ 1.95
GTF2A1-201ENST00000298173 PXYLP1Q8TE99 480 aa27.24■■□□□ 1.95
GTF2A1-201ENST00000298173 P2RX5Q93086 422 aa27.24■■□□□ 1.95
GTF2A1-201ENST00000298173 MRPL44Q9H9J2 332 aaKnown RBP27.24■■□□□ 1.95
GTF2A1-201ENST00000298173 ATP6V0A4Q9HBG4 840 aa27.24■■□□□ 1.95
GTF2A1-201ENST00000298173 LARSQ9P2J5 1176 aaKnown RBP27.24■■□□□ 1.95
GTF2A1-201ENST00000298173 ADCY3O60266 1144 aa27.23■■□□□ 1.95
GTF2A1-201ENST00000298173 MAPTP10636 758 aaKnown RBP27.23■■□□□ 1.95
GTF2A1-201ENST00000298173 ELNP15502 786 aa27.23■■□□□ 1.95
GTF2A1-201ENST00000298173 RFC5P40937 340 aa27.23■■□□□ 1.95
GTF2A1-201ENST00000298173 ARHGEF6Q15052 776 aa27.23■■□□□ 1.95
GTF2A1-201ENST00000298173 ODR4Q5SWX8 454 aa27.23■■□□□ 1.95
GTF2A1-201ENST00000298173 FOXR2Q6PJQ5 311 aa27.23■■□□□ 1.95
GTF2A1-201ENST00000298173 ZNF507Q8TCN5 953 aa27.23■■□□□ 1.95
GTF2A1-201ENST00000298173 STRA6Q9BX79 667 aa27.23■■□□□ 1.95
GTF2A1-201ENST00000298173 TRIM49BA6NDI0 452 aa27.22■■□□□ 1.95
GTF2A1-201ENST00000298173 ZNF18P17022 549 aa27.22■■□□□ 1.95
GTF2A1-201ENST00000298173 RTP1P59025 263 aa27.22■■□□□ 1.95
GTF2A1-201ENST00000298173 BMT2Q1RMZ1 405 aa27.22■■□□□ 1.95
GTF2A1-201ENST00000298173 FAM102BQ5T8I3 360 aa27.22■■□□□ 1.95
GTF2A1-201ENST00000298173 KIFAP3Q92845 792 aa27.22■■□□□ 1.95
GTF2A1-201ENST00000298173 C17orf75Q9HAS0 396 aa27.22■■□□□ 1.95
GTF2A1-201ENST00000298173 H3BRB1 525 aa27.21■■□□□ 1.95
GTF2A1-201ENST00000298173 SEPT4O43236 478 aa27.21■■□□□ 1.95
GTF2A1-201ENST00000298173 MAFO75444 373 aaPredicted RBP27.21■■□□□ 1.95
GTF2A1-201ENST00000298173 NMT1P30419 496 aaKnown RBP27.21■■□□□ 1.95
GTF2A1-201ENST00000298173 HOXD13P35453 343 aa27.21■■□□□ 1.95
GTF2A1-201ENST00000298173 POLGP54098 1239 aaPredicted RBP27.21■■□□□ 1.95
GTF2A1-201ENST00000298173 PRMT2P55345 433 aa27.21■■□□□ 1.95
GTF2A1-201ENST00000298173 EMC2Q15006 297 aa27.21■■□□□ 1.95
GTF2A1-201ENST00000298173 MAP3K21Q5TCX8 1036 aa27.21■■□□□ 1.95
GTF2A1-201ENST00000298173 ANKRD40Q6AI12 368 aa27.21■■□□□ 1.95
GTF2A1-201ENST00000298173 FAM178BQ8IXR5 827 aa27.21■■□□□ 1.95
GTF2A1-201ENST00000298173 NTPCRQ9BSD7 190 aaKnown RBP27.21■■□□□ 1.95
GTF2A1-201ENST00000298173 TUT1Q9H6E5 874 aaKnown RBP27.21■■□□□ 1.95
GTF2A1-201ENST00000298173 WBP1LQ9NX94 342 aa27.21■■□□□ 1.95
GTF2A1-201ENST00000298173 KIF20AO95235 890 aa27.21■■□□□ 1.95
GTF2A1-201ENST00000298173 ZNF286BP0CG31 522 aa27.21■■□□□ 1.95
GTF2A1-201ENST00000298173 MYBP10242 640 aa27.21■■□□□ 1.95
GTF2A1-201ENST00000298173 NKX3-2P78367 333 aa27.21■■□□□ 1.95
GTF2A1-201ENST00000298173 IRX5P78411 483 aaPredicted RBP27.21■■□□□ 1.95
GTF2A1-201ENST00000298173 SARM1Q6SZW1 724 aa27.21■■□□□ 1.95
GTF2A1-201ENST00000298173 DUSP9Q99956 384 aaKnown RBP27.21■■□□□ 1.95
GTF2A1-201ENST00000298173 AP5M1Q9H0R1 490 aa27.21■■□□□ 1.95
GTF2A1-201ENST00000298173 KCTD10Q9H3F6 313 aa27.21■■□□□ 1.95
GTF2A1-201ENST00000298173 SAMSN1Q9NSI8 373 aaKnown RBP27.21■■□□□ 1.95
GTF2A1-201ENST00000298173 IGKV6-21A0A0C4DH24 114 aa27.2■■□□□ 1.94
GTF2A1-201ENST00000298173 BICDL2A1A5D9 508 aa27.2■■□□□ 1.94
GTF2A1-201ENST00000298173 EIF3DO15371 548 aaKnown RBP eCLIP27.2■■□□□ 1.94
GTF2A1-201ENST00000298173 PPP1R37O75864 691 aa27.2■■□□□ 1.94
GTF2A1-201ENST00000298173 HMGCRP04035 888 aa27.2■■□□□ 1.94
GTF2A1-201ENST00000298173 SOX10P56693 466 aa27.2■■□□□ 1.94
GTF2A1-201ENST00000298173 TPM4P67936 248 aa27.2■■□□□ 1.94
GTF2A1-201ENST00000298173 RAET1EQ8TD07 263 aa27.2■■□□□ 1.94
GTF2A1-201ENST00000298173 SLC7A3Q8WY07 619 aa27.2■■□□□ 1.94
GTF2A1-201ENST00000298173 BEGAINQ9BUH8 593 aa27.2■■□□□ 1.94
GTF2A1-201ENST00000298173 ST6GALNAC4Q9H4F1 302 aa27.2■■□□□ 1.94
GTF2A1-201ENST00000298173 ZNF215Q9UL58 517 aaPredicted RBP27.2■■□□□ 1.94
GTF2A1-201ENST00000298173 ARL2P36404 184 aa27.19■■□□□ 1.94
GTF2A1-201ENST00000298173 CPT1AP50416 773 aa27.19■■□□□ 1.94
GTF2A1-201ENST00000298173 GJA9P57773 515 aa27.19■■□□□ 1.94
GTF2A1-201ENST00000298173 ZCWPW2Q504Y3 356 aa27.19■■□□□ 1.94
GTF2A1-201ENST00000298173 ZNF484Q5JVG2 852 aa27.19■■□□□ 1.94
GTF2A1-201ENST00000298173 CDKAL1Q5VV42 579 aa27.19■■□□□ 1.94
GTF2A1-201ENST00000298173 DNAJC5GQ8N7S2 189 aa27.19■■□□□ 1.94
GTF2A1-201ENST00000298173 TSKSQ9UJT2 592 aa27.19■■□□□ 1.94
GTF2A1-201ENST00000298173 TRPC6Q9Y210 931 aa27.19■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms