RNA–Protein interactions for RNA: ENST00000297423.8

SPIDR-201, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPIDR, Length 3,988 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-201ENST00000297423 ATP8A2Q9NTI2 1148 aa16.09■□□□□ 0.17
SPIDR-201ENST00000297423 COL4A3BPQ9Y5P4 624 aa16.09■□□□□ 0.17
SPIDR-201ENST00000297423 NQO1P15559 274 aaKnown RBP16.09■□□□□ 0.17
SPIDR-201ENST00000297423 GBP1P32455 592 aa16.09■□□□□ 0.17
SPIDR-201ENST00000297423 GJC1P36383 396 aa16.09■□□□□ 0.17
SPIDR-201ENST00000297423 PMS2P54278 862 aa16.09■□□□□ 0.17
SPIDR-201ENST00000297423 TROAPQ12815 778 aa16.09■□□□□ 0.17
SPIDR-201ENST00000297423 PLS1Q14651 629 aa16.09■□□□□ 0.17
SPIDR-201ENST00000297423 SEPT7Q16181 437 aaKnown RBP16.09■□□□□ 0.17
SPIDR-201ENST00000297423 LONRF1Q17RB8 773 aa16.09■□□□□ 0.17
SPIDR-201ENST00000297423 KIAA0895Q8NCT3 520 aa16.09■□□□□ 0.17
SPIDR-201ENST00000297423 LARP4BQ92615 738 aaKnown RBP16.09■□□□□ 0.17
SPIDR-201ENST00000297423 CNOT10Q9H9A5 744 aaKnown RBP16.09■□□□□ 0.17
SPIDR-201ENST00000297423 LY75O60449 1722 aa16.09■□□□□ 0.17
SPIDR-201ENST00000297423 ANKRD62A6NC57 917 aa16.09■□□□□ 0.17
SPIDR-201ENST00000297423 KLRC4O43908 158 aa16.09■□□□□ 0.17
SPIDR-201ENST00000297423 TRAPPC10P48553 1259 aa16.09■□□□□ 0.17
SPIDR-201ENST00000297423 SETDB1Q15047 1291 aa16.09■□□□□ 0.17
SPIDR-201ENST00000297423 CALCRLQ16602 461 aa16.09■□□□□ 0.17
SPIDR-201ENST00000297423 ARL6IP4Q66PJ3 421 aaKnown RBP16.09■□□□□ 0.17
SPIDR-201ENST00000297423 CCT6BQ92526 530 aa16.09■□□□□ 0.17
SPIDR-201ENST00000297423 DDX12PQ92771 950 aa16.09■□□□□ 0.17
SPIDR-201ENST00000297423 RAB17Q9H0T7 212 aa16.09■□□□□ 0.17
SPIDR-201ENST00000297423 RASAL2Q9UJF2 1139 aa16.09■□□□□ 0.17
SPIDR-201ENST00000297423 MYMKA6NI61 221 aa16.08■□□□□ 0.17
SPIDR-201ENST00000297423 FLOT1O75955 427 aa16.08■□□□□ 0.17
SPIDR-201ENST00000297423 PLCG2P16885 1265 aa16.08■□□□□ 0.17
SPIDR-201ENST00000297423 NAB2Q15742 525 aa16.08■□□□□ 0.17
SPIDR-201ENST00000297423 SEPT14Q6ZU15 432 aa16.08■□□□□ 0.17
SPIDR-201ENST00000297423 TBCKQ8TEA7 893 aa16.08■□□□□ 0.17
SPIDR-201ENST00000297423 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.08■□□□□ 0.171e-7■■□□□ 11.5
SPIDR-201ENST00000297423 USH1CQ9Y6N9 552 aa16.08■□□□□ 0.17
SPIDR-201ENST00000297423 DOK7Q18PE1 504 aa16.08■□□□□ 0.16
SPIDR-201ENST00000297423 TMED8Q6PL24 325 aaPredicted RBP16.08■□□□□ 0.16
SPIDR-201ENST00000297423 ZNF483Q8TF39 744 aaPredicted RBP16.08■□□□□ 0.16
SPIDR-201ENST00000297423 RIOK1Q9BRS2 568 aaKnown RBP16.08■□□□□ 0.16
SPIDR-201ENST00000297423 ASIC3Q9UHC3 531 aa16.08■□□□□ 0.16
SPIDR-201ENST00000297423 SERPINA10Q9UK55 444 aa16.08■□□□□ 0.16
SPIDR-201ENST00000297423 PTK2Q05397 1052 aa16.08■□□□□ 0.16
SPIDR-201ENST00000297423 PPP2R5BQ15173 497 aa16.08■□□□□ 0.16
SPIDR-201ENST00000297423 PFKFB3Q16875 520 aaPredicted RBP16.08■□□□□ 0.16
SPIDR-201ENST00000297423 C6orf89Q6UWU4 347 aa16.08■□□□□ 0.16
SPIDR-201ENST00000297423 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.08■□□□□ 0.164e-7■■■■■ 38.1
SPIDR-201ENST00000297423 TMEM260Q9NX78 707 aa16.08■□□□□ 0.16
SPIDR-201ENST00000297423 POLLQ9UGP5 575 aa16.08■□□□□ 0.16
SPIDR-201ENST00000297423 TAF1P21675 1872 aa16.07■□□□□ 0.16
SPIDR-201ENST00000297423 CLIC2O15247 247 aa16.07■□□□□ 0.16
SPIDR-201ENST00000297423 SLC9A1P19634 815 aa16.07■□□□□ 0.16
SPIDR-201ENST00000297423 CALCOCO2Q13137 446 aa16.07■□□□□ 0.16
SPIDR-201ENST00000297423 SLC18A3Q16572 532 aa16.07■□□□□ 0.16
SPIDR-201ENST00000297423 EAPPQ56P03 285 aaPredicted RBP16.07■□□□□ 0.16
SPIDR-201ENST00000297423 FAM26FQ5R3K3 315 aa16.07■□□□□ 0.16
SPIDR-201ENST00000297423 SLC51AQ86UW1 340 aa16.07■□□□□ 0.16
SPIDR-201ENST00000297423 RAB34Q9BZG1 259 aa16.07■□□□□ 0.16
SPIDR-201ENST00000297423 TTYH3Q9C0H2 523 aa16.07■□□□□ 0.16
SPIDR-201ENST00000297423 hCG_2014768A0A024R1R8 64 aa16.07■□□□□ 0.16
SPIDR-201ENST00000297423 CETN3O15182 167 aa16.07■□□□□ 0.16
SPIDR-201ENST00000297423 USP17L8P0C7I0 530 aa16.07■□□□□ 0.16
SPIDR-201ENST00000297423 MSH2P43246 934 aa16.07■□□□□ 0.16
SPIDR-201ENST00000297423 FKBP3Q00688 224 aaKnown RBP16.07■□□□□ 0.16
SPIDR-201ENST00000297423 GJB7Q6PEY0 223 aa16.07■□□□□ 0.16
SPIDR-201ENST00000297423 TAOK1Q7L7X3 1001 aa16.07■□□□□ 0.16
SPIDR-201ENST00000297423 TGFBRAP1Q8WUH2 860 aa16.07■□□□□ 0.16
SPIDR-201ENST00000297423 TAOK3Q9H2K8 898 aa16.07■□□□□ 0.16
SPIDR-201ENST00000297423 FAM114A2Q9NRY5 505 aa16.07■□□□□ 0.16
SPIDR-201ENST00000297423 HOMER3Q9NSC5 361 aa16.07■□□□□ 0.16
SPIDR-201ENST00000297423 NKIRAS1Q9NYS0 192 aa16.07■□□□□ 0.16
SPIDR-201ENST00000297423 CTTNBP2NLQ9P2B4 639 aa16.07■□□□□ 0.16
SPIDR-201ENST00000297423 AGAP1Q9UPQ3 857 aa16.07■□□□□ 0.16
SPIDR-201ENST00000297423 NPHP3-ACAD11A0A0J9YXS1 232 aa16.07■□□□□ 0.16
SPIDR-201ENST00000297423 XRCC4Q13426 336 aa16.07■□□□□ 0.16
SPIDR-201ENST00000297423 LRIG3Q6UXM1 1119 aa16.07■□□□□ 0.16
SPIDR-201ENST00000297423 PURBQ96QR8 312 aaKnown RBP16.07■□□□□ 0.16
SPIDR-201ENST00000297423 FAM129AQ9BZQ8 928 aa16.07■□□□□ 0.16
SPIDR-201ENST00000297423 KDM4CQ9H3R0 1056 aa16.07■□□□□ 0.16
SPIDR-201ENST00000297423 C6orf50Q9HD87 102 aa16.07■□□□□ 0.16
SPIDR-201ENST00000297423 DLGAP2Q9P1A6 1054 aa16.07■□□□□ 0.16
SPIDR-201ENST00000297423 CNTNAP5Q8WYK1 1306 aa16.07■□□□□ 0.16
SPIDR-201ENST00000297423 F8VZ95 297 aa16.06■□□□□ 0.16
SPIDR-201ENST00000297423 KRT16P08779 473 aa16.06■□□□□ 0.16
SPIDR-201ENST00000297423 ANKRD20A2Q5SQ80 823 aa16.06■□□□□ 0.16
SPIDR-201ENST00000297423 MEI1Q5TIA1 1274 aa16.06■□□□□ 0.16
SPIDR-201ENST00000297423 ANKRD20A1Q5TYW2 823 aa16.06■□□□□ 0.16
SPIDR-201ENST00000297423 ANKRD20A3Q5VUR7 823 aa16.06■□□□□ 0.16
SPIDR-201ENST00000297423 FBXO25Q8TCJ0 367 aa16.06■□□□□ 0.16
SPIDR-201ENST00000297423 CNKSR1Q969H4 720 aa16.06■□□□□ 0.16
SPIDR-201ENST00000297423 MTFR1LQ9H019 292 aa16.06■□□□□ 0.16
SPIDR-201ENST00000297423 SEMA4AQ9H3S1 761 aa16.06■□□□□ 0.16
SPIDR-201ENST00000297423 BATF3Q9NR55 127 aa16.06■□□□□ 0.16
SPIDR-201ENST00000297423 LRRN2O75325 713 aa16.06■□□□□ 0.16
SPIDR-201ENST00000297423 KCNJ1P48048 391 aa16.06■□□□□ 0.16
SPIDR-201ENST00000297423 PDE6CP51160 858 aa16.06■□□□□ 0.16
SPIDR-201ENST00000297423 RBM5P52756 815 aaKnown RBP eCLIP16.06■□□□□ 0.16
SPIDR-201ENST00000297423 SLC44A5Q8NCS7 719 aa16.06■□□□□ 0.16
SPIDR-201ENST00000297423 PBKQ96KB5 322 aa16.06■□□□□ 0.16
SPIDR-201ENST00000297423 COA1Q9GZY4 146 aa16.06■□□□□ 0.16
SPIDR-201ENST00000297423 ZNF287Q9HBT7 754 aa16.06■□□□□ 0.16
SPIDR-201ENST00000297423 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.06■□□□□ 0.167e-6■■■■□ 20.5
SPIDR-201ENST00000297423 SLC12A6Q9UHW9 1150 aa16.06■□□□□ 0.16
SPIDR-201ENST00000297423 TAF1LQ8IZX4 1826 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms