RNA–Protein interactions for RNA: ENST00000297350.8

TNFRSF11B-201, Transcript of TNF receptor superfamily member 11b, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF11B, Length 2,402 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11B-201ENST00000297350 SLC9A1P19634 815 aa10.92□□□□□ -0.66
TNFRSF11B-201ENST00000297350 SKOR1P84550 965 aa10.92□□□□□ -0.66
TNFRSF11B-201ENST00000297350 CEP55Q53EZ4 464 aa10.92□□□□□ -0.66
TNFRSF11B-201ENST00000297350 DCAF17Q5H9S7 520 aaPredicted RBP10.92□□□□□ -0.66
TNFRSF11B-201ENST00000297350 SLC17A8Q8NDX2 589 aa10.92□□□□□ -0.66
TNFRSF11B-201ENST00000297350 SLITRK6Q9H5Y7 841 aa10.92□□□□□ -0.66
TNFRSF11B-201ENST00000297350 DMAC2Q9NW81 257 aa10.92□□□□□ -0.66
TNFRSF11B-201ENST00000297350 ZMYM2Q9UBW7 1377 aa10.92□□□□□ -0.66
TNFRSF11B-201ENST00000297350 MEIS1O00470 390 aa10.92□□□□□ -0.66
TNFRSF11B-201ENST00000297350 MAPK13O15264 365 aa10.92□□□□□ -0.66
TNFRSF11B-201ENST00000297350 GAS7O60861 476 aa10.92□□□□□ -0.66
TNFRSF11B-201ENST00000297350 PHACTR2O75167 634 aa10.92□□□□□ -0.66
TNFRSF11B-201ENST00000297350 ZMYND10O75800 440 aa10.92□□□□□ -0.66
TNFRSF11B-201ENST00000297350 GDF11O95390 407 aa10.92□□□□□ -0.66
TNFRSF11B-201ENST00000297350 CXCR5P32302 372 aa10.92□□□□□ -0.66
TNFRSF11B-201ENST00000297350 LRIG3Q6UXM1 1119 aa10.92□□□□□ -0.66
TNFRSF11B-201ENST00000297350 MYCT1Q8N699 235 aa10.92□□□□□ -0.66
TNFRSF11B-201ENST00000297350 HDAC7Q8WUI4 952 aa10.92□□□□□ -0.66
TNFRSF11B-201ENST00000297350 FAM151AQ8WW52 585 aa10.92□□□□□ -0.66
TNFRSF11B-201ENST00000297350 NAP1L3Q99457 506 aaPredicted RBP10.92□□□□□ -0.66
TNFRSF11B-201ENST00000297350 TEKT3Q9BXF9 490 aa10.92□□□□□ -0.66
TNFRSF11B-201ENST00000297350 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.92□□□□□ -0.66
TNFRSF11B-201ENST00000297350 FEM1BQ9UK73 627 aa10.92□□□□□ -0.66
TNFRSF11B-201ENST00000297350 FAM196BA6NMK8 535 aa10.91□□□□□ -0.66
TNFRSF11B-201ENST00000297350 TGFB1I1O43294 461 aa10.91□□□□□ -0.66
TNFRSF11B-201ENST00000297350 SLITRK3O94933 977 aa10.91□□□□□ -0.66
TNFRSF11B-201ENST00000297350 FTCDO95954 541 aa10.91□□□□□ -0.66
TNFRSF11B-201ENST00000297350 TMEM253P0C7T8 217 aa10.91□□□□□ -0.66
TNFRSF11B-201ENST00000297350 SOX5P35711 763 aa10.91□□□□□ -0.66
TNFRSF11B-201ENST00000297350 MATR3P43243 847 aaKnown RBP eCLIP10.91□□□□□ -0.66
TNFRSF11B-201ENST00000297350 CACNB3P54284 484 aa10.91□□□□□ -0.66
TNFRSF11B-201ENST00000297350 GHRHRQ02643 423 aa10.91□□□□□ -0.66
TNFRSF11B-201ENST00000297350 ARID5AQ03989 594 aa10.91□□□□□ -0.66
TNFRSF11B-201ENST00000297350 CFAP58Q5T655 872 aa10.91□□□□□ -0.66
TNFRSF11B-201ENST00000297350 TCERG1LQ5VWI1 586 aa10.91□□□□□ -0.66
TNFRSF11B-201ENST00000297350 C12orf56Q8IXR9 622 aa10.91□□□□□ -0.66
TNFRSF11B-201ENST00000297350 RASGEF1CQ8N431 466 aa10.91□□□□□ -0.66
TNFRSF11B-201ENST00000297350 TPCN2Q8NHX9 752 aa10.91□□□□□ -0.66
TNFRSF11B-201ENST00000297350 SCFD2Q8WU76 684 aa10.91□□□□□ -0.66
TNFRSF11B-201ENST00000297350 LRRC45Q96CN5 670 aa10.91□□□□□ -0.66
TNFRSF11B-201ENST00000297350 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.91□□□□□ -0.66
TNFRSF11B-201ENST00000297350 ISCUQ9H1K1 167 aa10.91□□□□□ -0.66
TNFRSF11B-201ENST00000297350 TAF1DQ9H5J8 278 aaPredicted RBP10.91□□□□□ -0.66
TNFRSF11B-201ENST00000297350 MAP3K20Q9NYL2 800 aaKnown RBP10.91□□□□□ -0.66
TNFRSF11B-201ENST00000297350 BHMG1C9JSJ3 638 aaPredicted RBP10.9□□□□□ -0.66
TNFRSF11B-201ENST00000297350 EML1O00423 815 aa10.9□□□□□ -0.66
TNFRSF11B-201ENST00000297350 ZEB2O60315 1214 aa10.9□□□□□ -0.66
TNFRSF11B-201ENST00000297350 ERCC3P19447 782 aa10.9□□□□□ -0.66
TNFRSF11B-201ENST00000297350 HSPA9P38646 679 aaKnown RBP10.9□□□□□ -0.66
TNFRSF11B-201ENST00000297350 FMO5P49326 533 aa10.9□□□□□ -0.66
TNFRSF11B-201ENST00000297350 CYP4A11Q02928 519 aa10.9□□□□□ -0.66
TNFRSF11B-201ENST00000297350 MTMR3Q13615 1198 aa10.9□□□□□ -0.66
TNFRSF11B-201ENST00000297350 TNIP1Q15025 636 aa10.9□□□□□ -0.66
TNFRSF11B-201ENST00000297350 TCEAL1Q15170 157 aa10.9□□□□□ -0.66
TNFRSF11B-201ENST00000297350 SPDYCQ5MJ68 293 aa10.9□□□□□ -0.66
TNFRSF11B-201ENST00000297350 B3GNT9Q6UX72 402 aa10.9□□□□□ -0.66
TNFRSF11B-201ENST00000297350 LRRC31Q6UY01 552 aa10.9□□□□□ -0.66
TNFRSF11B-201ENST00000297350 ZNF720Q7Z2F6 126 aa10.9□□□□□ -0.66
TNFRSF11B-201ENST00000297350 SRLQ86TD4 932 aa10.9□□□□□ -0.66
TNFRSF11B-201ENST00000297350 FAM178BQ8IXR5 827 aa10.9□□□□□ -0.66
TNFRSF11B-201ENST00000297350 GSPT2Q8IYD1 628 aaKnown RBP10.9□□□□□ -0.66
TNFRSF11B-201ENST00000297350 IQCKQ8N0W5 287 aa10.9□□□□□ -0.66
TNFRSF11B-201ENST00000297350 VPS33BQ9H267 617 aa10.9□□□□□ -0.66
TNFRSF11B-201ENST00000297350 VCPKMTQ9H867 229 aa10.9□□□□□ -0.66
TNFRSF11B-201ENST00000297350 F8VZ95 297 aa10.9□□□□□ -0.66
TNFRSF11B-201ENST00000297350 KCNK3O14649 394 aa10.9□□□□□ -0.66
TNFRSF11B-201ENST00000297350 PMM2O15305 246 aa10.9□□□□□ -0.66
TNFRSF11B-201ENST00000297350 HOXA13P31271 388 aaPredicted RBP10.9□□□□□ -0.66
TNFRSF11B-201ENST00000297350 HADHBP55084 474 aaKnown RBP10.9□□□□□ -0.66
TNFRSF11B-201ENST00000297350 CETN1Q12798 172 aa10.9□□□□□ -0.66
TNFRSF11B-201ENST00000297350 PEX26Q7Z412 305 aa10.9□□□□□ -0.66
TNFRSF11B-201ENST00000297350 SPATS2Q86XZ4 545 aaKnown RBP10.9□□□□□ -0.66
TNFRSF11B-201ENST00000297350 SLC30A5Q8TAD4 765 aa10.9□□□□□ -0.66
TNFRSF11B-201ENST00000297350 RBM46Q8TBY0 533 aaKnown RBP10.9□□□□□ -0.66
TNFRSF11B-201ENST00000297350 RFFLQ8WZ73 363 aa10.9□□□□□ -0.66
TNFRSF11B-201ENST00000297350 PSMB7Q99436 277 aa10.9□□□□□ -0.66
TNFRSF11B-201ENST00000297350 WDR18Q9BV38 432 aa10.9□□□□□ -0.66
TNFRSF11B-201ENST00000297350 STRA6Q9BX79 667 aa10.9□□□□□ -0.66
TNFRSF11B-201ENST00000297350 CAPS2Q9BXY5 557 aa10.9□□□□□ -0.66
TNFRSF11B-201ENST00000297350 TDRD3Q9H7E2 651 aaKnown RBP10.9□□□□□ -0.66
TNFRSF11B-201ENST00000297350 TMEM206Q9H813 350 aa10.9□□□□□ -0.66
TNFRSF11B-201ENST00000297350 GINM1Q9NU53 330 aa10.9□□□□□ -0.66
TNFRSF11B-201ENST00000297350 ZBTB21Q9ULJ3 1066 aa10.9□□□□□ -0.66
TNFRSF11B-201ENST00000297350 PFASO15067 1338 aa10.9□□□□□ -0.66
TNFRSF11B-201ENST00000297350 MYH11P35749 1972 aa10.9□□□□□ -0.67
TNFRSF11B-201ENST00000297350 A0A1W2PRG0 241 aa10.89□□□□□ -0.67
TNFRSF11B-201ENST00000297350 SPDYE2BA6NHP3 402 aa10.89□□□□□ -0.67
TNFRSF11B-201ENST00000297350 RSPH10B2B2RC85 870 aa10.89□□□□□ -0.67
TNFRSF11B-201ENST00000297350 HMGB1P1B2RPK0 211 aaPredicted RBP10.89□□□□□ -0.67
TNFRSF11B-201ENST00000297350 GLI1P08151 1106 aa10.89□□□□□ -0.67
TNFRSF11B-201ENST00000297350 RSPH10BP0C881 870 aa10.89□□□□□ -0.67
TNFRSF11B-201ENST00000297350 SPDYE6P0CI01 402 aa10.89□□□□□ -0.67
TNFRSF11B-201ENST00000297350 ACTN1P12814 892 aa10.89□□□□□ -0.67
TNFRSF11B-201ENST00000297350 NOP2P46087 812 aaKnown RBP10.89□□□□□ -0.67
TNFRSF11B-201ENST00000297350 MCCD1P59942 119 aaPredicted RBP10.89□□□□□ -0.67
TNFRSF11B-201ENST00000297350 SLC7A5Q01650 507 aa10.89□□□□□ -0.67
TNFRSF11B-201ENST00000297350 GUCY2DQ02846 1103 aa10.89□□□□□ -0.67
TNFRSF11B-201ENST00000297350 PAXIP1Q6ZW49 1069 aaPredicted RBP10.89□□□□□ -0.67
TNFRSF11B-201ENST00000297350 MAATS1Q7Z4T9 603 aa10.89□□□□□ -0.67
TNFRSF11B-201ENST00000297350 TPH2Q8IWU9 490 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms