RNA–Protein interactions for RNA: ENST00000296682.3

PRDM9-201, Transcript of PR/SET domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM9, Length 3,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-201ENST00000296682 TRIM58Q8NG06 486 aa10.17□□□□□ -0.78
PRDM9-201ENST00000296682 C7orf43Q8WVR3 580 aa10.17□□□□□ -0.78
PRDM9-201ENST00000296682 CAMKK2Q96RR4 588 aa10.17□□□□□ -0.78
PRDM9-201ENST00000296682 EIF3CQ99613 913 aaKnown RBP10.17□□□□□ -0.78
PRDM9-201ENST00000296682 AP1M1Q9BXS5 423 aa10.17□□□□□ -0.78
PRDM9-201ENST00000296682 RNF146Q9NTX7 359 aa10.17□□□□□ -0.78
PRDM9-201ENST00000296682 LARSQ9P2J5 1176 aaKnown RBP10.17□□□□□ -0.78
PRDM9-201ENST00000296682 RBAK-RBAKDNI3L0D1 243 aa10.16□□□□□ -0.78
PRDM9-201ENST00000296682 VIL1P09327 827 aaKnown RBP10.16□□□□□ -0.78
PRDM9-201ENST00000296682 ITGB5P18084 799 aa10.16□□□□□ -0.78
PRDM9-201ENST00000296682 PTK2Q05397 1052 aa10.16□□□□□ -0.78
PRDM9-201ENST00000296682 TNFAIP1Q13829 316 aa10.16□□□□□ -0.78
PRDM9-201ENST00000296682 GLYCTKQ8IVS8 523 aa10.16□□□□□ -0.78
PRDM9-201ENST00000296682 WNK4Q96J92 1243 aa10.16□□□□□ -0.78
PRDM9-201ENST00000296682 CEP170P1Q96L14 293 aa10.16□□□□□ -0.78
PRDM9-201ENST00000296682 CEP89Q96ST8 783 aa10.16□□□□□ -0.78
PRDM9-201ENST00000296682 BCCIPQ9P287 314 aaKnown RBP eCLIP10.16□□□□□ -0.78
PRDM9-201ENST00000296682 SIK3Q9Y2K2 1263 aa10.16□□□□□ -0.78
PRDM9-201ENST00000296682 ATRNL1Q5VV63 1379 aa10.16□□□□□ -0.78
PRDM9-201ENST00000296682 EIF3JO75822 258 aaKnown RBP10.16□□□□□ -0.78
PRDM9-201ENST00000296682 TNFAIP3P21580 790 aa10.16□□□□□ -0.78
PRDM9-201ENST00000296682 GJC1P36383 396 aa10.16□□□□□ -0.78
PRDM9-201ENST00000296682 STAT1P42224 750 aa10.16□□□□□ -0.78
PRDM9-201ENST00000296682 CDK17Q00537 523 aa10.16□□□□□ -0.78
PRDM9-201ENST00000296682 CKAP4Q07065 602 aaKnown RBP10.16□□□□□ -0.78
PRDM9-201ENST00000296682 FIGNQ5HY92 759 aa10.16□□□□□ -0.78
PRDM9-201ENST00000296682 ALKBH5Q6P6C2 394 aaKnown RBP10.16□□□□□ -0.78
PRDM9-201ENST00000296682 ANKRD35Q8N283 1001 aa10.16□□□□□ -0.78
PRDM9-201ENST00000296682 HDAC7Q8WUI4 952 aa10.16□□□□□ -0.78
PRDM9-201ENST00000296682 PPP1R16BQ96T49 567 aa10.16□□□□□ -0.78
PRDM9-201ENST00000296682 UBE2TQ9NPD8 197 aaPredicted RBP10.16□□□□□ -0.78
PRDM9-201ENST00000296682 COL20A1Q9P218 1284 aa10.16□□□□□ -0.78
PRDM9-201ENST00000296682 WRAP73Q9P2S5 460 aaPredicted RBP10.16□□□□□ -0.78
PRDM9-201ENST00000296682 FEM1BQ9UK73 627 aa10.16□□□□□ -0.78
PRDM9-201ENST00000296682 PDE2AO00408 941 aaPredicted RBP10.15□□□□□ -0.78
PRDM9-201ENST00000296682 ATP9AO75110 1047 aa10.15□□□□□ -0.78
PRDM9-201ENST00000296682 GNA14O95837 355 aa10.15□□□□□ -0.78
PRDM9-201ENST00000296682 UCHL3P15374 230 aa10.15□□□□□ -0.78
PRDM9-201ENST00000296682 PSMC2P35998 433 aaKnown RBP10.15□□□□□ -0.78
PRDM9-201ENST00000296682 SF3A3Q12874 501 aaKnown RBP eCLIP10.15□□□□□ -0.78
PRDM9-201ENST00000296682 MTERF2Q49AM1 385 aa10.15□□□□□ -0.78
PRDM9-201ENST00000296682 SWSAP1Q6NVH7 229 aa10.15□□□□□ -0.78
PRDM9-201ENST00000296682 RSRC2Q7L4I2 434 aaKnown RBP10.15□□□□□ -0.78
PRDM9-201ENST00000296682 HDXQ7Z353 690 aa10.15□□□□□ -0.78
PRDM9-201ENST00000296682 DAAM2Q86T65 1068 aa10.15□□□□□ -0.78
PRDM9-201ENST00000296682 FAM160B2Q86V87 743 aa10.15□□□□□ -0.78
PRDM9-201ENST00000296682 SMAP1Q8IYB5 467 aaPredicted RBP10.15□□□□□ -0.78
PRDM9-201ENST00000296682 LRRC1Q9BTT6 524 aa10.15□□□□□ -0.78
PRDM9-201ENST00000296682 ACP6Q9NPH0 428 aa10.15□□□□□ -0.78
PRDM9-201ENST00000296682 SALL4Q9UJQ4 1053 aa10.15□□□□□ -0.78
PRDM9-201ENST00000296682 RIPK3Q9Y572 518 aa10.15□□□□□ -0.78
PRDM9-201ENST00000296682 KRT5P13647 590 aa10.15□□□□□ -0.78
PRDM9-201ENST00000296682 KCNA4P22459 653 aa10.15□□□□□ -0.78
PRDM9-201ENST00000296682 PLA2G4AP47712 749 aa10.15□□□□□ -0.78
PRDM9-201ENST00000296682 MAP2K1Q02750 393 aaPredicted RBP10.15□□□□□ -0.78
PRDM9-201ENST00000296682 C8orf74Q6P047 294 aa10.15□□□□□ -0.78
PRDM9-201ENST00000296682 LENG9Q96B70 501 aa10.15□□□□□ -0.78
PRDM9-201ENST00000296682 KRT12Q99456 494 aa10.15□□□□□ -0.78
PRDM9-201ENST00000296682 POP1Q99575 1024 aaKnown RBP10.15□□□□□ -0.78
PRDM9-201ENST00000296682 SEPT9Q9UHD8 586 aaPredicted RBP10.15□□□□□ -0.78
PRDM9-201ENST00000296682 DNAJC12Q9UKB3 198 aa10.15□□□□□ -0.78
PRDM9-201ENST00000296682 SERPING1P05155 500 aa10.15□□□□□ -0.78
PRDM9-201ENST00000296682 MARK3P27448 753 aa10.15□□□□□ -0.78
PRDM9-201ENST00000296682 HNRNPH3P31942 346 aaKnown RBP10.15□□□□□ -0.78
PRDM9-201ENST00000296682 MMP14P50281 582 aa10.15□□□□□ -0.78
PRDM9-201ENST00000296682 CETN1Q12798 172 aa10.15□□□□□ -0.78
PRDM9-201ENST00000296682 TUBB2AQ13885 445 aa10.15□□□□□ -0.78
PRDM9-201ENST00000296682 MEA1Q16626 185 aa10.15□□□□□ -0.78
PRDM9-201ENST00000296682 GADL1Q6ZQY3 521 aa10.15□□□□□ -0.78
PRDM9-201ENST00000296682 NCAPG2Q86XI2 1143 aa10.15□□□□□ -0.78
PRDM9-201ENST00000296682 TUBB2BQ9BVA1 445 aa10.15□□□□□ -0.78
PRDM9-201ENST00000296682 TSGA10Q9BZW7 698 aa10.15□□□□□ -0.78
PRDM9-201ENST00000296682 ANKZF1Q9H8Y5 726 aa10.15□□□□□ -0.78
PRDM9-201ENST00000296682 TMOD4Q9NZQ9 345 aa10.15□□□□□ -0.78
PRDM9-201ENST00000296682 GABBR1Q9UBS5 961 aa10.15□□□□□ -0.78
PRDM9-201ENST00000296682 ZRANB2O95218 330 aaKnown RBP eCLIP10.14□□□□□ -0.79
PRDM9-201ENST00000296682 CALCAP01258 141 aa10.14□□□□□ -0.79
PRDM9-201ENST00000296682 GUCY2DQ02846 1103 aa10.14□□□□□ -0.79
PRDM9-201ENST00000296682 BIRC3Q13489 604 aa10.14□□□□□ -0.79
PRDM9-201ENST00000296682 IQCEQ6IPM2 695 aa10.14□□□□□ -0.79
PRDM9-201ENST00000296682 CBWD1Q9BRT8 395 aa10.14□□□□□ -0.79
PRDM9-201ENST00000296682 TYW1Q9NV66 732 aaKnown RBP10.14□□□□□ -0.79
PRDM9-201ENST00000296682 CEP72Q9P209 647 aa10.14□□□□□ -0.79
PRDM9-201ENST00000296682 TBC1D8O95759 1140 aa10.14□□□□□ -0.79
PRDM9-201ENST00000296682 VCAM1P19320 739 aa10.14□□□□□ -0.79
PRDM9-201ENST00000296682 CASP8Q14790 479 aa10.14□□□□□ -0.79
PRDM9-201ENST00000296682 RPS6KA1Q15418 735 aa10.14□□□□□ -0.79
PRDM9-201ENST00000296682 EPC2Q52LR7 807 aa10.14□□□□□ -0.79
PRDM9-201ENST00000296682 PEX26Q7Z412 305 aa10.14□□□□□ -0.79
PRDM9-201ENST00000296682 TRIM59Q8IWR1 403 aa10.14□□□□□ -0.79
PRDM9-201ENST00000296682 OSBPL9Q96SU4 736 aa10.14□□□□□ -0.79
PRDM9-201ENST00000296682 MXRA8Q9BRK3 442 aa10.14□□□□□ -0.79
PRDM9-201ENST00000296682 GGA3Q9NZ52 723 aa10.14□□□□□ -0.79
PRDM9-201ENST00000296682 GINS2Q9Y248 185 aa10.14□□□□□ -0.79
PRDM9-201ENST00000296682 FAN1Q9Y2M0 1017 aa10.14□□□□□ -0.79
PRDM9-201ENST00000296682 JRKLQ9Y4A0 524 aa10.14□□□□□ -0.79
PRDM9-201ENST00000296682 SMCHD1A6NHR9 2005 aa10.14□□□□□ -0.79
PRDM9-201ENST00000296682 CYP3A7-CYP3A51PA0A087WV96 503 aa10.14□□□□□ -0.79
PRDM9-201ENST00000296682 ATP8B1O43520 1251 aa10.14□□□□□ -0.79
PRDM9-201ENST00000296682 CYP3A7P24462 503 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms