RNA–Protein interactions for RNA: ENST00000296302.11

PBRM1-201, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 5,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-201ENST00000296302 RFFLQ8WZ73 363 aa11.8□□□□□ -0.52
PBRM1-201ENST00000296302 GFM2Q969S9 779 aaKnown RBP11.8□□□□□ -0.52
PBRM1-201ENST00000296302 FAM161BQ96MY7 647 aa11.8□□□□□ -0.52
PBRM1-201ENST00000296302 KLC2Q9H0B6 622 aa11.8□□□□□ -0.52
PBRM1-201ENST00000296302 SAMD9LQ8IVG5 1584 aa11.8□□□□□ -0.52
PBRM1-201ENST00000296302 S100BP04271 92 aaPredicted RBP11.8□□□□□ -0.52
PBRM1-201ENST00000296302 RFX1P22670 979 aa11.8□□□□□ -0.52
PBRM1-201ENST00000296302 CDC27P30260 824 aa11.8□□□□□ -0.52
PBRM1-201ENST00000296302 LSP1P33241 339 aa11.8□□□□□ -0.52
PBRM1-201ENST00000296302 ATP2C1P98194 919 aaPredicted RBP11.8□□□□□ -0.52
PBRM1-201ENST00000296302 IL1RL1Q01638 556 aa11.8□□□□□ -0.52
PBRM1-201ENST00000296302 LARGE2Q8N3Y3 721 aa11.8□□□□□ -0.52
PBRM1-201ENST00000296302 PRPF31Q8WWY3 499 aaKnown RBP11.8□□□□□ -0.52
PBRM1-201ENST00000296302 SNF8Q96H20 258 aa11.8□□□□□ -0.52
PBRM1-201ENST00000296302 SERPINB13Q9UIV8 391 aa11.8□□□□□ -0.52
PBRM1-201ENST00000296302 H0YIN7 160 aa11.8□□□□□ -0.52
PBRM1-201ENST00000296302 COASYQ13057 564 aa11.8□□□□□ -0.52
PBRM1-201ENST00000296302 AP3B2Q13367 1082 aa11.8□□□□□ -0.52
PBRM1-201ENST00000296302 RSPH3Q86UC2 560 aa11.8□□□□□ -0.52
PBRM1-201ENST00000296302 AGGF1Q8N302 714 aaeCLIP11.8□□□□□ -0.52
PBRM1-201ENST00000296302 TEX9Q8N6V9 391 aa11.8□□□□□ -0.52
PBRM1-201ENST00000296302 KIFC3Q9BVG8 833 aa11.8□□□□□ -0.52
PBRM1-201ENST00000296302 ANO3Q9BYT9 981 aa11.8□□□□□ -0.52
PBRM1-201ENST00000296302 USP42Q9H9J4 1324 aaKnown RBP11.8□□□□□ -0.52
PBRM1-201ENST00000296302 MLXIPLQ9NP71 852 aa11.8□□□□□ -0.52
PBRM1-201ENST00000296302 ADD3Q9UEY8 706 aaKnown RBP11.8□□□□□ -0.52
PBRM1-201ENST00000296302 SEPT9Q9UHD8 586 aaPredicted RBP11.8□□□□□ -0.52
PBRM1-201ENST00000296302 FBXO2Q9UK22 296 aaPredicted RBP11.8□□□□□ -0.52
PBRM1-201ENST00000296302 M0QZ92 97 aa11.8□□□□□ -0.52
PBRM1-201ENST00000296302 CCDC22O60826 627 aa11.8□□□□□ -0.52
PBRM1-201ENST00000296302 CCND1P24385 295 aa11.8□□□□□ -0.52
PBRM1-201ENST00000296302 ANXA13P27216 316 aa11.8□□□□□ -0.52
PBRM1-201ENST00000296302 EXOSC10Q01780 885 aaKnown RBP11.8□□□□□ -0.52
PBRM1-201ENST00000296302 SURF1Q15526 300 aa11.8□□□□□ -0.52
PBRM1-201ENST00000296302 CCDC137Q6PK04 289 aaKnown RBP11.8□□□□□ -0.52
PBRM1-201ENST00000296302 BZW1Q7L1Q6 419 aaKnown RBP11.8□□□□□ -0.52
PBRM1-201ENST00000296302 SH2D3CQ8N5H7 860 aa11.8□□□□□ -0.52
PBRM1-201ENST00000296302 DCTN4Q9UJW0 460 aa11.8□□□□□ -0.52
PBRM1-201ENST00000296302 CYP2D7A0A087X1C5 515 aa11.79□□□□□ -0.52
PBRM1-201ENST00000296302 SSU72P8A0A1W2PR75 194 aa11.79□□□□□ -0.52
PBRM1-201ENST00000296302 TLR3O15455 904 aaKnown RBP11.79□□□□□ -0.52
PBRM1-201ENST00000296302 CASP2P42575 452 aa11.79□□□□□ -0.52
PBRM1-201ENST00000296302 THOC5Q13769 683 aaKnown RBP11.79□□□□□ -0.52
PBRM1-201ENST00000296302 TNFAIP1Q13829 316 aa11.79□□□□□ -0.52
PBRM1-201ENST00000296302 STAT4Q14765 748 aa11.79□□□□□ -0.52
PBRM1-201ENST00000296302 LRRC14Q15048 493 aa11.79□□□□□ -0.52
PBRM1-201ENST00000296302 UBE2SQ16763 222 aa11.79□□□□□ -0.52
PBRM1-201ENST00000296302 SLC30A9Q6PML9 568 aa11.79□□□□□ -0.52
PBRM1-201ENST00000296302 RGS9BPQ6ZS82 235 aa11.79□□□□□ -0.52
PBRM1-201ENST00000296302 DCLK2Q8N568 766 aa11.79□□□□□ -0.52
PBRM1-201ENST00000296302 IL17RAQ96F46 866 aa11.79□□□□□ -0.52
PBRM1-201ENST00000296302 ADAM22Q9P0K1 906 aa11.79□□□□□ -0.52
PBRM1-201ENST00000296302 G3BP2Q9UN86 482 aaKnown RBP11.79□□□□□ -0.52
PBRM1-201ENST00000296302 GSTA4O15217 222 aa11.79□□□□□ -0.52
PBRM1-201ENST00000296302 USP17L8P0C7I0 530 aa11.79□□□□□ -0.52
PBRM1-201ENST00000296302 SLC16A2P36021 539 aa11.79□□□□□ -0.52
PBRM1-201ENST00000296302 TFDP2Q14188 446 aa11.79□□□□□ -0.52
PBRM1-201ENST00000296302 FAF2Q96CS3 445 aa11.79□□□□□ -0.52
PBRM1-201ENST00000296302 ERVV-1B6SEH8 477 aa11.79□□□□□ -0.52
PBRM1-201ENST00000296302 SESTD1Q86VW0 696 aa11.79□□□□□ -0.52
PBRM1-201ENST00000296302 ICA1LQ8NDH6 482 aa11.79□□□□□ -0.52
PBRM1-201ENST00000296302 CEP170P1Q96L14 293 aa11.79□□□□□ -0.52
PBRM1-201ENST00000296302 SLC38A10Q9HBR0 1119 aa11.79□□□□□ -0.52
PBRM1-201ENST00000296302 TRIM33Q9UPN9 1127 aa11.79□□□□□ -0.52
PBRM1-201ENST00000296302 USP15Q9Y4E8 981 aaPredicted RBP11.79□□□□□ -0.52
PBRM1-201ENST00000296302 UNC13AQ9UPW8 1703 aa11.79□□□□□ -0.52
PBRM1-201ENST00000296302 KPNA7A9QM74 516 aa11.79□□□□□ -0.52
PBRM1-201ENST00000296302 H2AFXP16104 143 aaPredicted RBP11.79□□□□□ -0.52
PBRM1-201ENST00000296302 RANBP1P43487 201 aa11.79□□□□□ -0.52
PBRM1-201ENST00000296302 STAT2P52630 851 aa11.79□□□□□ -0.52
PBRM1-201ENST00000296302 KLC1Q07866 573 aa11.79□□□□□ -0.52
PBRM1-201ENST00000296302 ZNF211Q13398 564 aaPredicted RBP11.79□□□□□ -0.52
PBRM1-201ENST00000296302 ERICH1Q86X53 443 aa11.79□□□□□ -0.52
PBRM1-201ENST00000296302 TRIM59Q8IWR1 403 aa11.79□□□□□ -0.52
PBRM1-201ENST00000296302 ZNF564Q8TBZ8 553 aaPredicted RBP11.79□□□□□ -0.52
PBRM1-201ENST00000296302 XPO6Q96QU8 1125 aaKnown RBP11.79□□□□□ -0.52
PBRM1-201ENST00000296302 TTC1Q99614 292 aa11.79□□□□□ -0.52
PBRM1-201ENST00000296302 CHP1Q99653 195 aa11.79□□□□□ -0.52
PBRM1-201ENST00000296302 AMACRQ9UHK6 382 aa11.79□□□□□ -0.52
PBRM1-201ENST00000296302 NCOA3Q9Y6Q9 1424 aa11.79□□□□□ -0.52
PBRM1-201ENST00000296302 HEG1Q9ULI3 1381 aa11.79□□□□□ -0.52
PBRM1-201ENST00000296302 XPOTO43592 962 aaKnown RBP11.78□□□□□ -0.52
PBRM1-201ENST00000296302 TOM1O60784 492 aa11.78□□□□□ -0.52
PBRM1-201ENST00000296302 DIAPH2O60879 1101 aa11.78□□□□□ -0.52
PBRM1-201ENST00000296302 FAM107AO95990 144 aa11.78□□□□□ -0.52
PBRM1-201ENST00000296302 IGKV5-2P06315 115 aa11.78□□□□□ -0.52
PBRM1-201ENST00000296302 SRGNP10124 158 aa11.78□□□□□ -0.52
PBRM1-201ENST00000296302 BMP3P12645 472 aa11.78□□□□□ -0.52
PBRM1-201ENST00000296302 SCNN1DP51172 638 aa11.78□□□□□ -0.52
PBRM1-201ENST00000296302 KNOP1Q1ED39 458 aaKnown RBP11.78□□□□□ -0.52
PBRM1-201ENST00000296302 C16orf87Q6PH81 154 aa11.78□□□□□ -0.52
PBRM1-201ENST00000296302 ACAD11Q709F0 780 aa11.78□□□□□ -0.52
PBRM1-201ENST00000296302 SFR1Q86XK3 245 aa11.78□□□□□ -0.52
PBRM1-201ENST00000296302 SEC16BQ96JE7 1060 aa11.78□□□□□ -0.52
PBRM1-201ENST00000296302 SMYD3Q9H7B4 428 aa11.78□□□□□ -0.52
PBRM1-201ENST00000296302 SEC31BQ9NQW1 1179 aa11.78□□□□□ -0.52
PBRM1-201ENST00000296302 NOD1Q9Y239 953 aa11.78□□□□□ -0.52
PBRM1-201ENST00000296302 NCAPD2Q15021 1401 aa11.78□□□□□ -0.52
PBRM1-201ENST00000296302 LAMC1P11047 1609 aa11.78□□□□□ -0.52
PBRM1-201ENST00000296302 ZNF233A6NK53 670 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms