RNA–Protein interactions for RNA: ENST00000295549.8

LINC01116-201, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 2 BASIC

Gene LINC01116, Length 1,407 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-201ENST00000295549 IQUBQ8NA54 791 aa25.15■■□□□ 1.62
LINC01116-201ENST00000295549 CAGE1Q8TC20 777 aa25.15■■□□□ 1.62
LINC01116-201ENST00000295549 MRPS27Q92552 414 aaKnown RBP25.15■■□□□ 1.62
LINC01116-201ENST00000295549 LARP4BQ92615 738 aaKnown RBP25.15■■□□□ 1.62
LINC01116-201ENST00000295549 TMEM39AQ9NV64 488 aa25.15■■□□□ 1.62
LINC01116-201ENST00000295549 KAT6AQ92794 2004 aa25.15■■□□□ 1.62
LINC01116-201ENST00000295549 A0A1B0GVL5 298 aa25.14■■□□□ 1.62
LINC01116-201ENST00000295549 EVI5O60447 810 aa25.14■■□□□ 1.62
LINC01116-201ENST00000295549 PFKFB1P16118 471 aa25.14■■□□□ 1.62
LINC01116-201ENST00000295549 TMOD1P28289 359 aa25.14■■□□□ 1.62
LINC01116-201ENST00000295549 STAT6P42226 847 aa25.14■■□□□ 1.62
LINC01116-201ENST00000295549 RBL2Q08999 1139 aa25.14■■□□□ 1.62
LINC01116-201ENST00000295549 EMC2Q15006 297 aa25.14■■□□□ 1.62
LINC01116-201ENST00000295549 KIAA0319LQ8IZA0 1049 aa25.14■■□□□ 1.62
LINC01116-201ENST00000295549 NME8Q8N427 588 aa25.14■■□□□ 1.62
LINC01116-201ENST00000295549 DHX38Q92620 1227 aaKnown RBP25.14■■□□□ 1.62
LINC01116-201ENST00000295549 CUEDC2Q9H467 287 aa25.14■■□□□ 1.62
LINC01116-201ENST00000295549 ATP6V0A4Q9HBG4 840 aa25.14■■□□□ 1.62
LINC01116-201ENST00000295549 KCND2Q9NZV8 630 aa25.14■■□□□ 1.62
LINC01116-201ENST00000295549 POLR2DO15514 142 aaKnown RBP25.13■■□□□ 1.61
LINC01116-201ENST00000295549 CAND2O75155 1236 aa25.13■■□□□ 1.61
LINC01116-201ENST00000295549 CAPN15O75808 1086 aa25.13■■□□□ 1.61
LINC01116-201ENST00000295549 CYP11B2P19099 503 aa25.13■■□□□ 1.61
LINC01116-201ENST00000295549 DNM2P50570 870 aa25.13■■□□□ 1.61
LINC01116-201ENST00000295549 TRIM71Q2Q1W2 868 aaKnown RBP25.13■■□□□ 1.61
LINC01116-201ENST00000295549 CCDC155Q8N6L0 562 aa25.13■■□□□ 1.61
LINC01116-201ENST00000295549 FSIP1Q8NA03 581 aa25.13■■□□□ 1.61
LINC01116-201ENST00000295549 DPF3Q92784 378 aa25.13■■□□□ 1.61
LINC01116-201ENST00000295549 WNT8BQ93098 351 aa25.13■■□□□ 1.61
LINC01116-201ENST00000295549 SUGCTQ9HAC7 445 aa25.13■■□□□ 1.61
LINC01116-201ENST00000295549 PITPNM1O00562 1244 aa25.12■■□□□ 1.61
LINC01116-201ENST00000295549 KIAA0355O15063 1070 aa25.12■■□□□ 1.61
LINC01116-201ENST00000295549 MKRN4PQ13434 485 aaPredicted RBP25.12■■□□□ 1.61
LINC01116-201ENST00000295549 BFSP2Q13515 415 aa25.12■■□□□ 1.61
LINC01116-201ENST00000295549 RINT1Q6NUQ1 792 aa25.12■■□□□ 1.61
LINC01116-201ENST00000295549 C1orf186Q6ZWK4 172 aa25.12■■□□□ 1.61
LINC01116-201ENST00000295549 RSPH3Q86UC2 560 aa25.12■■□□□ 1.61
LINC01116-201ENST00000295549 LRRC71Q8N4P6 559 aa25.12■■□□□ 1.61
LINC01116-201ENST00000295549 MCPH1Q8NEM0 835 aa25.12■■□□□ 1.61
LINC01116-201ENST00000295549 DNAJB3Q8WWF6 145 aa25.12■■□□□ 1.61
LINC01116-201ENST00000295549 MTRQ99707 1265 aa25.12■■□□□ 1.61
LINC01116-201ENST00000295549 NOC4LQ9BVI4 516 aaKnown RBP25.12■■□□□ 1.61
LINC01116-201ENST00000295549 XPNPEP1Q9NQW7 623 aa25.12■■□□□ 1.61
LINC01116-201ENST00000295549 USO1O60763 962 aaKnown RBP25.12■■□□□ 1.61
LINC01116-201ENST00000295549 SSBP05455 408 aaKnown RBP eCLIP25.12■■□□□ 1.61
LINC01116-201ENST00000295549 CLCN3P51790 818 aa25.12■■□□□ 1.61
LINC01116-201ENST00000295549 NDUFA8P51970 172 aa25.12■■□□□ 1.61
LINC01116-201ENST00000295549 MCM6Q14566 821 aa25.12■■□□□ 1.61
LINC01116-201ENST00000295549 SH3RF1Q7Z6J0 888 aa25.12■■□□□ 1.61
LINC01116-201ENST00000295549 C7orf61Q8IZ16 206 aa25.12■■□□□ 1.61
LINC01116-201ENST00000295549 TCP11Q8WWU5 503 aa25.12■■□□□ 1.61
LINC01116-201ENST00000295549 FAM49AQ9H0Q0 323 aaPredicted RBP25.12■■□□□ 1.61
LINC01116-201ENST00000295549 HIPK3Q9H422 1215 aa25.12■■□□□ 1.61
LINC01116-201ENST00000295549 GOLPH3LQ9H4A5 285 aa25.12■■□□□ 1.61
LINC01116-201ENST00000295549 TRIM43BA6NCK2 446 aa25.11■■□□□ 1.61
LINC01116-201ENST00000295549 PRPF40AO75400 957 aaKnown RBP25.11■■□□□ 1.61
LINC01116-201ENST00000295549 THPOP40225 353 aa25.11■■□□□ 1.61
LINC01116-201ENST00000295549 SYKP43405 635 aa25.11■■□□□ 1.61
LINC01116-201ENST00000295549 IER5Q5VY09 327 aa25.11■■□□□ 1.61
LINC01116-201ENST00000295549 SV2BQ7L1I2 683 aa25.11■■□□□ 1.61
LINC01116-201ENST00000295549 ZNF710Q8N1W2 664 aa25.11■■□□□ 1.61
LINC01116-201ENST00000295549 TRIM43Q96BQ3 446 aaPredicted RBP25.11■■□□□ 1.61
LINC01116-201ENST00000295549 DHX58Q96C10 678 aa25.11■■□□□ 1.61
LINC01116-201ENST00000295549 MAP7D2Q96T17 732 aa25.11■■□□□ 1.61
LINC01116-201ENST00000295549 RUSC1Q9BVN2 902 aa25.11■■□□□ 1.61
LINC01116-201ENST00000295549 USP25Q9UHP3 1055 aa25.11■■□□□ 1.61
LINC01116-201ENST00000295549 TRIP12Q14669 1992 aaPredicted RBP25.1■■□□□ 1.61
LINC01116-201ENST00000295549 GADD45BO75293 160 aaPredicted RBP25.1■■□□□ 1.61
LINC01116-201ENST00000295549 CKBP12277 381 aa25.1■■□□□ 1.61
LINC01116-201ENST00000295549 GUCY2CP25092 1073 aa25.1■■□□□ 1.61
LINC01116-201ENST00000295549 UBE2HP62256 183 aa25.1■■□□□ 1.61
LINC01116-201ENST00000295549 DRP2Q13474 957 aa25.1■■□□□ 1.61
LINC01116-201ENST00000295549 TPRNQ4KMQ1 711 aa25.1■■□□□ 1.61
LINC01116-201ENST00000295549 TIPINQ9BVW5 301 aa25.1■■□□□ 1.61
LINC01116-201ENST00000295549 MAGEF1Q9HAY2 307 aa25.1■■□□□ 1.61
LINC01116-201ENST00000295549 PRDM5Q9NQX1 630 aaPredicted RBP25.1■■□□□ 1.61
LINC01116-201ENST00000295549 BMP2KQ9NSY1 1161 aaPredicted RBP25.1■■□□□ 1.61
LINC01116-201ENST00000295549 PRKAG2Q9UGJ0 569 aa25.1■■□□□ 1.61
LINC01116-201ENST00000295549 SLFN14P0C7P3 912 aa25.09■■□□□ 1.61
LINC01116-201ENST00000295549 CDC42EP1Q00587 391 aa25.09■■□□□ 1.61
LINC01116-201ENST00000295549 ARSHQ5FYA8 562 aa25.09■■□□□ 1.61
LINC01116-201ENST00000295549 TMEM143Q96AN5 459 aa25.09■■□□□ 1.61
LINC01116-201ENST00000295549 KBTBD4Q9NVX7 518 aa25.09■■□□□ 1.61
LINC01116-201ENST00000295549 SUCLA2Q9P2R7 463 aaPredicted RBP25.09■■□□□ 1.61
LINC01116-201ENST00000295549 AKT3Q9Y243 479 aa25.09■■□□□ 1.61
LINC01116-201ENST00000295549 ALPK3Q96L96 1907 aa25.08■■□□□ 1.61
LINC01116-201ENST00000295549 TIMP1P01033 207 aa25.08■■□□□ 1.61
LINC01116-201ENST00000295549 SELPP16109 830 aa25.08■■□□□ 1.61
LINC01116-201ENST00000295549 ARL2P36404 184 aa25.08■■□□□ 1.61
LINC01116-201ENST00000295549 DHX8Q14562 1220 aaKnown RBP25.08■■□□□ 1.61
LINC01116-201ENST00000295549 FAM26DQ5JW98 314 aa25.08■■□□□ 1.61
LINC01116-201ENST00000295549 GPBP1Q86WP2 473 aa25.08■■□□□ 1.61
LINC01116-201ENST00000295549 PSPC1Q8WXF1 523 aaKnown RBP25.08■■□□□ 1.61
LINC01116-201ENST00000295549 TNMDQ9H2S6 317 aa25.08■■□□□ 1.61
LINC01116-201ENST00000295549 NR2E3Q9Y5X4 410 aa25.08■■□□□ 1.61
LINC01116-201ENST00000295549 GOLGA6L22H0YM25 854 aa25.07■■□□□ 1.6
LINC01116-201ENST00000295549 ASAP2O43150 1006 aa25.07■■□□□ 1.6
LINC01116-201ENST00000295549 ACTN4O43707 911 aaKnown RBP25.07■■□□□ 1.6
LINC01116-201ENST00000295549 ZNF202O95125 648 aa25.07■■□□□ 1.6
LINC01116-201ENST00000295549 MRPS6P82932 125 aaKnown RBP25.07■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms