RNA–Protein interactions for RNA: ENST00000294172.6

NXF1-201, Transcript of nuclear RNA export factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NXF1, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-201ENST00000294172 GBP6Q6ZN66 633 aa15.33■□□□□ 0.05
NXF1-201ENST00000294172 TRPM4Q8TD43 1214 aa15.33■□□□□ 0.05
NXF1-201ENST00000294172 ALS2CR12Q96Q35 445 aa15.33■□□□□ 0.05
NXF1-201ENST00000294172 PDCD2LQ9BRP1 358 aa15.33■□□□□ 0.05
NXF1-201ENST00000294172 GBP3Q9H0R5 595 aa15.33■□□□□ 0.05
NXF1-201ENST00000294172 PXMP2Q9NR77 195 aa15.33■□□□□ 0.05
NXF1-201ENST00000294172 AGPAT3Q9NRZ7 376 aa15.33■□□□□ 0.05
NXF1-201ENST00000294172 TBC1D22BQ9NU19 505 aa15.33■□□□□ 0.05
NXF1-201ENST00000294172 RNF216Q9NWF9 866 aaPredicted RBP15.33■□□□□ 0.05
NXF1-201ENST00000294172 MAP3K20Q9NYL2 800 aaKnown RBP15.33■□□□□ 0.05
NXF1-201ENST00000294172 AIPL1Q9NZN9 384 aa15.33■□□□□ 0.05
NXF1-201ENST00000294172 GCNT4Q9P109 453 aa15.33■□□□□ 0.05
NXF1-201ENST00000294172 ADAMTS1Q9UHI8 967 aa15.33■□□□□ 0.05
NXF1-201ENST00000294172 SALL4Q9UJQ4 1053 aa15.33■□□□□ 0.05
NXF1-201ENST00000294172 JRKLQ9Y4A0 524 aa15.33■□□□□ 0.05
NXF1-201ENST00000294172 RBBP6Q7Z6E9 1792 aaKnown RBP15.33■□□□□ 0.04
NXF1-201ENST00000294172 LTBP3Q9NS15 1303 aa15.33■□□□□ 0.04
NXF1-201ENST00000294172 K7ENM7 598 aa15.33■□□□□ 0.04
NXF1-201ENST00000294172 BUB1O43683 1085 aa15.33■□□□□ 0.04
NXF1-201ENST00000294172 TUBB4BP68371 445 aa15.33■□□□□ 0.04
NXF1-201ENST00000294172 MAPK7Q13164 816 aa15.33■□□□□ 0.04
NXF1-201ENST00000294172 PRKG1Q13976 671 aa15.33■□□□□ 0.04
NXF1-201ENST00000294172 SNRNP48Q6IEG0 339 aaKnown RBP15.33■□□□□ 0.04
NXF1-201ENST00000294172 PLCB1Q9NQ66 1216 aa15.33■□□□□ 0.04
NXF1-201ENST00000294172 FRMD4BQ9Y2L6 1034 aa15.33■□□□□ 0.04
NXF1-201ENST00000294172 BRCA1P38398 1863 aaKnown RBP15.33■□□□□ 0.04
NXF1-201ENST00000294172 SRCAPQ6ZRS2 3230 aa15.32■□□□□ 0.04
NXF1-201ENST00000294172 POTEB2H3BUK9 544 aa15.32■□□□□ 0.04
NXF1-201ENST00000294172 RARRES1P49788 294 aa15.32■□□□□ 0.04
NXF1-201ENST00000294172 DPY19L2P1Q6NXN4 242 aa15.32■□□□□ 0.04
NXF1-201ENST00000294172 GJB7Q6PEY0 223 aa15.32■□□□□ 0.04
NXF1-201ENST00000294172 TXLNBQ8N3L3 684 aa15.32■□□□□ 0.04
NXF1-201ENST00000294172 RDH13Q8NBN7 331 aa15.32■□□□□ 0.04
NXF1-201ENST00000294172 BORCS6Q96GS4 357 aa15.32■□□□□ 0.04
NXF1-201ENST00000294172 FAM53CQ9NYF3 392 aa15.32■□□□□ 0.04
NXF1-201ENST00000294172 A0A087X0T9 212 aa15.32■□□□□ 0.04
NXF1-201ENST00000294172 RBAK-RBAKDNI3L0D1 243 aa15.32■□□□□ 0.04
NXF1-201ENST00000294172 FAM228BP0C875 321 aa15.32■□□□□ 0.04
NXF1-201ENST00000294172 YWHABP31946 246 aaKnown RBP15.32■□□□□ 0.04
NXF1-201ENST00000294172 SLC18A3Q16572 532 aa15.32■□□□□ 0.04
NXF1-201ENST00000294172 UGCGQ16739 394 aa15.32■□□□□ 0.04
NXF1-201ENST00000294172 APOBEC3FQ8IUX4 373 aaKnown RBP15.32■□□□□ 0.04
NXF1-201ENST00000294172 NLGN2Q8NFZ4 835 aa15.32■□□□□ 0.04
NXF1-201ENST00000294172 PSMB7Q99436 277 aa15.32■□□□□ 0.04
NXF1-201ENST00000294172 LUC7LQ9NQ29 371 aaKnown RBP15.32■□□□□ 0.04
NXF1-201ENST00000294172 GGA3Q9NZ52 723 aa15.32■□□□□ 0.04
NXF1-201ENST00000294172 ZNF112Q9UJU3 913 aa15.32■□□□□ 0.04
NXF1-201ENST00000294172 UBE4BO95155 1302 aa15.31■□□□□ 0.04
NXF1-201ENST00000294172 CCDC151A5D8V7 595 aa15.31■□□□□ 0.04
NXF1-201ENST00000294172 PJA2O43164 708 aa15.31■□□□□ 0.04
NXF1-201ENST00000294172 EXOC3O60645 756 aa15.31■□□□□ 0.04
NXF1-201ENST00000294172 PTK2Q05397 1052 aa15.31■□□□□ 0.04
NXF1-201ENST00000294172 CKAP4Q07065 602 aaKnown RBP15.31■□□□□ 0.04
NXF1-201ENST00000294172 BRD3Q15059 726 aa15.31■□□□□ 0.04
NXF1-201ENST00000294172 MSANTD4Q8NCY6 345 aa15.31■□□□□ 0.04
NXF1-201ENST00000294172 NOX5Q96PH1 765 aa15.31■□□□□ 0.04
NXF1-201ENST00000294172 LARSQ9P2J5 1176 aaKnown RBP15.31■□□□□ 0.04
NXF1-201ENST00000294172 PNMA2Q9UL42 364 aa15.31■□□□□ 0.04
NXF1-201ENST00000294172 SASH3O75995 380 aa15.31■□□□□ 0.04
NXF1-201ENST00000294172 TBC1D8O95759 1140 aa15.31■□□□□ 0.04
NXF1-201ENST00000294172 FDX1P10109 184 aa15.31■□□□□ 0.04
NXF1-201ENST00000294172 IRF2BP2Q7Z5L9 587 aa15.31■□□□□ 0.04
NXF1-201ENST00000294172 SAMD3Q8N6K7 520 aa15.31■□□□□ 0.04
NXF1-201ENST00000294172 RBM46Q8TBY0 533 aaKnown RBP15.31■□□□□ 0.04
NXF1-201ENST00000294172 DBR1Q9UK59 544 aaKnown RBP15.31■□□□□ 0.04
NXF1-201ENST00000294172 AJAP1Q9UKB5 411 aaPredicted RBP15.31■□□□□ 0.04
NXF1-201ENST00000294172 SNX12Q9UMY4 172 aa15.31■□□□□ 0.04
NXF1-201ENST00000294172 TULP1O00294 542 aaPredicted RBP15.3■□□□□ 0.04
NXF1-201ENST00000294172 NCK2O43639 380 aa15.3■□□□□ 0.04
NXF1-201ENST00000294172 CCNE2O96020 404 aa15.3■□□□□ 0.04
NXF1-201ENST00000294172 TRIM49P0CI25 452 aa15.3■□□□□ 0.04
NXF1-201ENST00000294172 TRIM49CP0CI26 452 aa15.3■□□□□ 0.04
NXF1-201ENST00000294172 CXCR5P32302 372 aa15.3■□□□□ 0.04
NXF1-201ENST00000294172 NFIL3Q16649 462 aa15.3■□□□□ 0.04
NXF1-201ENST00000294172 LONRF2Q1L5Z9 754 aa15.3■□□□□ 0.04
NXF1-201ENST00000294172 KIAA0753Q2KHM9 967 aa15.3■□□□□ 0.04
NXF1-201ENST00000294172 PCIF1Q9H4Z3 704 aa15.3■□□□□ 0.04
NXF1-201ENST00000294172 SIX2Q9NPC8 291 aa15.3■□□□□ 0.04
NXF1-201ENST00000294172 ST7Q9NRC1 585 aa15.3■□□□□ 0.04
NXF1-201ENST00000294172 ZHX1Q9UKY1 873 aaPredicted RBP15.3■□□□□ 0.04
NXF1-201ENST00000294172 WDR64B1ANS9 1081 aa15.29■□□□□ 0.04
NXF1-201ENST00000294172 TISP43B9A030 160 aa15.29■□□□□ 0.04
NXF1-201ENST00000294172 PDE2AO00408 941 aaPredicted RBP15.29■□□□□ 0.04
NXF1-201ENST00000294172 BACH1O14867 736 aa15.29■□□□□ 0.04
NXF1-201ENST00000294172 NR3C2P08235 984 aa15.29■□□□□ 0.04
NXF1-201ENST00000294172 VSNL1P62760 191 aa15.29■□□□□ 0.04
NXF1-201ENST00000294172 PLA2G4FQ68DD2 849 aa15.29■□□□□ 0.04
NXF1-201ENST00000294172 NFRKBQ6P4R8 1299 aa15.29■□□□□ 0.04
NXF1-201ENST00000294172 ZNF571Q7Z3V5 609 aaPredicted RBP15.29■□□□□ 0.04
NXF1-201ENST00000294172 CCDC125Q86Z20 511 aa15.29■□□□□ 0.04
NXF1-201ENST00000294172 GOLGA5Q8TBA6 731 aa15.29■□□□□ 0.04
NXF1-201ENST00000294172 SGIP1Q9BQI5 828 aa15.29■□□□□ 0.04
NXF1-201ENST00000294172 MKNK1Q9BUB5 465 aa15.29■□□□□ 0.04
NXF1-201ENST00000294172 PACSIN1Q9BY11 444 aa15.29■□□□□ 0.04
NXF1-201ENST00000294172 GPRC5CQ9NQ84 441 aa15.29■□□□□ 0.04
NXF1-201ENST00000294172 DMAC2Q9NW81 257 aa15.29■□□□□ 0.04
NXF1-201ENST00000294172 RAB21Q9UL25 225 aa15.29■□□□□ 0.04
NXF1-201ENST00000294172 MYH10P35580 1976 aa15.29■□□□□ 0.04
NXF1-201ENST00000294172 PPP1R37O75864 691 aa15.29■□□□□ 0.04
NXF1-201ENST00000294172 PLS3P13797 630 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms