RNA–Protein interactions for RNA: ENST00000289448.2

HMHB1-201, Transcript of histocompatibility minor HB-1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HMHB1, Length 384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMHB1-201ENST00000289448 LOXHD1Q8IVV2 1947 aa10.77□□□□□ -0.69
HMHB1-201ENST00000289448 C9IYK1 514 aa10.76□□□□□ -0.69
HMHB1-201ENST00000289448 EML1O00423 815 aa10.76□□□□□ -0.69
HMHB1-201ENST00000289448 MAGEB2O15479 319 aa10.76□□□□□ -0.69
HMHB1-201ENST00000289448 SEC24BO95487 1268 aa10.76□□□□□ -0.69
HMHB1-201ENST00000289448 RB1P06400 928 aa10.76□□□□□ -0.69
HMHB1-201ENST00000289448 FDPSP14324 419 aaKnown RBP10.76□□□□□ -0.69
HMHB1-201ENST00000289448 DNAJB1P25685 340 aa10.76□□□□□ -0.69
HMHB1-201ENST00000289448 SFNP31947 248 aa10.76□□□□□ -0.69
HMHB1-201ENST00000289448 SARSP49591 514 aaKnown RBP10.76□□□□□ -0.69
HMHB1-201ENST00000289448 JAK3P52333 1124 aa10.76□□□□□ -0.69
HMHB1-201ENST00000289448 NLRP11P59045 1033 aaKnown RBP10.76□□□□□ -0.69
HMHB1-201ENST00000289448 ANAPC15P60006 121 aa10.76□□□□□ -0.69
HMHB1-201ENST00000289448 DRP2Q13474 957 aa10.76□□□□□ -0.69
HMHB1-201ENST00000289448 CAMK1Q14012 370 aa10.76□□□□□ -0.69
HMHB1-201ENST00000289448 DSC3Q14574 896 aa10.76□□□□□ -0.69
HMHB1-201ENST00000289448 COL19A1Q14993 1142 aa10.76□□□□□ -0.69
HMHB1-201ENST00000289448 NONOQ15233 471 aaKnown RBP eCLIP10.76□□□□□ -0.69
HMHB1-201ENST00000289448 LEXMQ3ZCV2 418 aa10.76□□□□□ -0.69
HMHB1-201ENST00000289448 TIGD5Q53EQ6 642 aa10.76□□□□□ -0.69
HMHB1-201ENST00000289448 GALNT17Q6IS24 598 aa10.76□□□□□ -0.69
HMHB1-201ENST00000289448 CPLX2Q6PUV4 134 aaKnown RBP10.76□□□□□ -0.69
HMHB1-201ENST00000289448 MOXD1Q6UVY6 613 aa10.76□□□□□ -0.69
HMHB1-201ENST00000289448 CMTR2Q8IYT2 770 aaKnown RBP10.76□□□□□ -0.69
HMHB1-201ENST00000289448 FAM177A1Q8N128 213 aaPredicted RBP10.76□□□□□ -0.69
HMHB1-201ENST00000289448 NECAB1Q8N987 351 aa10.76□□□□□ -0.69
HMHB1-201ENST00000289448 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.76□□□□□ -0.69
HMHB1-201ENST00000289448 FAM167AQ96KS9 214 aa10.76□□□□□ -0.69
HMHB1-201ENST00000289448 SH2D3AQ9BRG2 576 aa10.76□□□□□ -0.69
HMHB1-201ENST00000289448 C11orf84Q9BUA3 381 aaPredicted RBP10.76□□□□□ -0.69
HMHB1-201ENST00000289448 C22orf23Q9BZE7 217 aa10.76□□□□□ -0.69
HMHB1-201ENST00000289448 NSUN3Q9H649 340 aaKnown RBP10.76□□□□□ -0.69
HMHB1-201ENST00000289448 ALG13Q9NP73 1137 aaKnown RBP10.76□□□□□ -0.69
HMHB1-201ENST00000289448 CD320Q9NPF0 282 aa10.76□□□□□ -0.69
HMHB1-201ENST00000289448 RGS18Q9NS28 235 aa10.76□□□□□ -0.69
HMHB1-201ENST00000289448 NRBP2Q9NSY0 501 aa10.76□□□□□ -0.69
HMHB1-201ENST00000289448 PLAGL2Q9UPG8 496 aa10.76□□□□□ -0.69
HMHB1-201ENST00000289448 MYH9P35579 1960 aaKnown RBP10.76□□□□□ -0.69
HMHB1-201ENST00000289448 FAM205CA6NFA0 338 aa10.75□□□□□ -0.69
HMHB1-201ENST00000289448 H3BQ06 376 aaPredicted RBP10.75□□□□□ -0.69
HMHB1-201ENST00000289448 GPR182O15218 404 aa10.75□□□□□ -0.69
HMHB1-201ENST00000289448 CSPG5O95196 566 aa10.75□□□□□ -0.69
HMHB1-201ENST00000289448 ITGB1P05556 798 aa10.75□□□□□ -0.69
HMHB1-201ENST00000289448 STAG3L1P0CL83 205 aa10.75□□□□□ -0.69
HMHB1-201ENST00000289448 GTF2F1P35269 517 aaKnown RBP eCLIP10.75□□□□□ -0.69
HMHB1-201ENST00000289448 FAM189BP81408 668 aa10.75□□□□□ -0.69
HMHB1-201ENST00000289448 ME3Q16798 604 aa10.75□□□□□ -0.69
HMHB1-201ENST00000289448 LETM2Q2VYF4 491 aa10.75□□□□□ -0.69
HMHB1-201ENST00000289448 FAM102BQ5T8I3 360 aa10.75□□□□□ -0.69
HMHB1-201ENST00000289448 MIER3Q7Z3K6 550 aa10.75□□□□□ -0.69
HMHB1-201ENST00000289448 KRT25Q7Z3Z0 450 aa10.75□□□□□ -0.69
HMHB1-201ENST00000289448 NEK9Q8TD19 979 aa10.75□□□□□ -0.69
HMHB1-201ENST00000289448 KHSRPQ92945 711 aaKnown RBP eCLIP10.75□□□□□ -0.69
HMHB1-201ENST00000289448 ORC3Q9UBD5 711 aaPredicted RBP10.75□□□□□ -0.69
HMHB1-201ENST00000289448 HCSTQ9UBK5 93 aa10.75□□□□□ -0.69
HMHB1-201ENST00000289448 DDX25Q9UHL0 483 aaKnown RBP10.75□□□□□ -0.69
HMHB1-201ENST00000289448 VAV3Q9UKW4 847 aa10.75□□□□□ -0.69
HMHB1-201ENST00000289448 CEP131Q9UPN4 1083 aa10.75□□□□□ -0.69
HMHB1-201ENST00000289448 AKT3Q9Y243 479 aa10.75□□□□□ -0.69
HMHB1-201ENST00000289448 RWDD3Q9Y3V2 267 aa10.75□□□□□ -0.69
HMHB1-201ENST00000289448 STK36Q9NRP7 1315 aa10.75□□□□□ -0.69
HMHB1-201ENST00000289448 NLRC5Q86WI3 1866 aa10.74□□□□□ -0.69
HMHB1-201ENST00000289448 DENND3A2RUS2 1198 aa10.74□□□□□ -0.69
HMHB1-201ENST00000289448 CDKL5O76039 1030 aa10.74□□□□□ -0.69
HMHB1-201ENST00000289448 MMP1P03956 469 aa10.74□□□□□ -0.69
HMHB1-201ENST00000289448 FGFR1P11362 822 aa10.74□□□□□ -0.69
HMHB1-201ENST00000289448 IL9P15248 144 aa10.74□□□□□ -0.69
HMHB1-201ENST00000289448 FGFR4P22455 802 aa10.74□□□□□ -0.69
HMHB1-201ENST00000289448 LTBRP36941 435 aa10.74□□□□□ -0.69
HMHB1-201ENST00000289448 GPC3P51654 580 aa10.74□□□□□ -0.69
HMHB1-201ENST00000289448 ST3GAL1Q11201 340 aa10.74□□□□□ -0.69
HMHB1-201ENST00000289448 HYAL1Q12794 435 aa10.74□□□□□ -0.69
HMHB1-201ENST00000289448 XKR3Q5GH77 459 aa10.74□□□□□ -0.69
HMHB1-201ENST00000289448 PIK3AP1Q6ZUJ8 805 aa10.74□□□□□ -0.69
HMHB1-201ENST00000289448 SLC24A5Q71RS6 500 aa10.74□□□□□ -0.69
HMHB1-201ENST00000289448 KLHL23Q8NBE8 558 aa10.74□□□□□ -0.69
HMHB1-201ENST00000289448 RDM1Q8NG50 284 aa10.74□□□□□ -0.69
HMHB1-201ENST00000289448 SPPL3Q8TCT6 385 aa10.74□□□□□ -0.69
HMHB1-201ENST00000289448 HAS1Q92839 578 aa10.74□□□□□ -0.69
HMHB1-201ENST00000289448 TNFRSF25Q93038 417 aa10.74□□□□□ -0.69
HMHB1-201ENST00000289448 PABPC5Q96DU9 382 aaKnown RBP10.74□□□□□ -0.69
HMHB1-201ENST00000289448 PLVAPQ9BX97 442 aa10.74□□□□□ -0.69
HMHB1-201ENST00000289448 NIFKQ9BYG3 293 aaKnown RBP10.74□□□□□ -0.69
HMHB1-201ENST00000289448 KCNMB3Q9NPA1 279 aa10.74□□□□□ -0.69
HMHB1-201ENST00000289448 C1orf112Q9NSG2 853 aa10.74□□□□□ -0.69
HMHB1-201ENST00000289448 RNF19AQ9NV58 838 aa10.74□□□□□ -0.69
HMHB1-201ENST00000289448 WRAP73Q9P2S5 460 aaPredicted RBP10.74□□□□□ -0.69
HMHB1-201ENST00000289448 LRFN2Q9ULH4 789 aa10.74□□□□□ -0.69
HMHB1-201ENST00000289448 PCDHB7Q9Y5E2 793 aa10.74□□□□□ -0.69
HMHB1-201ENST00000289448 RALGAPA2Q2PPJ7 1873 aa10.74□□□□□ -0.69
HMHB1-201ENST00000289448 WDR81Q562E7 1941 aa10.74□□□□□ -0.69
HMHB1-201ENST00000289448 IGKV6-21A0A0C4DH24 114 aa10.73□□□□□ -0.69
HMHB1-201ENST00000289448 CCDC194A0A1B0GVG4 234 aa10.73□□□□□ -0.69
HMHB1-201ENST00000289448 GRXCR2A6NFK2 248 aa10.73□□□□□ -0.69
HMHB1-201ENST00000289448 TBKBP1A7MCY6 615 aa10.73□□□□□ -0.69
HMHB1-201ENST00000289448 DDX11L8A8MPP1 907 aa10.73□□□□□ -0.69
HMHB1-201ENST00000289448 JAK2O60674 1132 aa10.73□□□□□ -0.69
HMHB1-201ENST00000289448 CSDE1O75534 798 aaKnown RBP10.73□□□□□ -0.69
HMHB1-201ENST00000289448 DARSP14868 501 aaKnown RBP10.73□□□□□ -0.69
HMHB1-201ENST00000289448 EIF4BP23588 611 aaKnown RBP10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms