RNA–Protein interactions for RNA: ENST00000287600.8

PDE6D-201, Transcript of phosphodiesterase 6D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6D, Length 1,175 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6D-201ENST00000287600 MTHFD1LQ6UB35 978 aa17.21■□□□□ 0.35
PDE6D-201ENST00000287600 KRT25Q7Z3Z0 450 aa17.21■□□□□ 0.35
PDE6D-201ENST00000287600 CMTR2Q8IYT2 770 aaKnown RBP17.21■□□□□ 0.35
PDE6D-201ENST00000287600 OXER1Q8TDS5 423 aa17.21■□□□□ 0.35
PDE6D-201ENST00000287600 UIMC1Q96RL1 719 aa17.21■□□□□ 0.35
PDE6D-201ENST00000287600 PLVAPQ9BX97 442 aa17.21■□□□□ 0.35
PDE6D-201ENST00000287600 CELF4Q9BZC1 486 aaKnown RBP17.21■□□□□ 0.35
PDE6D-201ENST00000287600 GINS2Q9Y248 185 aa17.21■□□□□ 0.35
PDE6D-201ENST00000287600 MRPL42Q9Y6G3 142 aaKnown RBP17.21■□□□□ 0.35
PDE6D-201ENST00000287600 CCDC194A0A1B0GVG4 234 aa17.2■□□□□ 0.34
PDE6D-201ENST00000287600 EDIL3O43854 480 aa17.2■□□□□ 0.34
PDE6D-201ENST00000287600 CD2BP2O95400 341 aaKnown RBP17.2■□□□□ 0.34
PDE6D-201ENST00000287600 KRT76Q01546 638 aa17.2■□□□□ 0.34
PDE6D-201ENST00000287600 HYAL1Q12794 435 aa17.2■□□□□ 0.34
PDE6D-201ENST00000287600 CLUL1Q15846 466 aa17.2■□□□□ 0.34
PDE6D-201ENST00000287600 ZNF577Q9BSK1 485 aa17.2■□□□□ 0.34
PDE6D-201ENST00000287600 BRMS1Q9HCU9 246 aa17.2■□□□□ 0.34
PDE6D-201ENST00000287600 ALG13Q9NP73 1137 aaKnown RBP17.2■□□□□ 0.34
PDE6D-201ENST00000287600 LRFN2Q9ULH4 789 aa17.2■□□□□ 0.34
PDE6D-201ENST00000287600 KDM3AQ9Y4C1 1321 aa17.2■□□□□ 0.34
PDE6D-201ENST00000287600 IPO5O00410 1097 aaKnown RBP17.19■□□□□ 0.34
PDE6D-201ENST00000287600 HBP1O60381 514 aa17.19■□□□□ 0.34
PDE6D-201ENST00000287600 ATG7O95352 703 aa17.19■□□□□ 0.34
PDE6D-201ENST00000287600 CCNE2O96020 404 aa17.19■□□□□ 0.34
PDE6D-201ENST00000287600 ALADP13716 330 aa17.19■□□□□ 0.34
PDE6D-201ENST00000287600 CD44P16070 742 aaKnown RBP17.19■□□□□ 0.34
PDE6D-201ENST00000287600 KRT2P35908 639 aa17.19■□□□□ 0.34
PDE6D-201ENST00000287600 SETQ01105 290 aaPredicted RBP17.19■□□□□ 0.34
PDE6D-201ENST00000287600 INF2Q27J81 1249 aa17.19■□□□□ 0.34
PDE6D-201ENST00000287600 TMEM266Q2M3C6 531 aa17.19■□□□□ 0.34
PDE6D-201ENST00000287600 RTN4RL1Q86UN2 441 aaPredicted RBP17.19■□□□□ 0.34
PDE6D-201ENST00000287600 CCDC60Q8IWA6 550 aaPredicted RBP17.19■□□□□ 0.34
PDE6D-201ENST00000287600 NME8Q8N427 588 aa17.19■□□□□ 0.34
PDE6D-201ENST00000287600 ATP8B4Q8TF62 1192 aa17.19■□□□□ 0.34
PDE6D-201ENST00000287600 P2RX5Q93086 422 aa17.19■□□□□ 0.34
PDE6D-201ENST00000287600 PPP2R3CQ969Q6 453 aa17.19■□□□□ 0.34
PDE6D-201ENST00000287600 TMX3Q96JJ7 454 aa17.19■□□□□ 0.34
PDE6D-201ENST00000287600 IGFLR1Q9H665 355 aa17.19■□□□□ 0.34
PDE6D-201ENST00000287600 ZNF302Q9NR11 478 aa17.19■□□□□ 0.34
PDE6D-201ENST00000287600 PRKAG3Q9UGI9 489 aa17.19■□□□□ 0.34
PDE6D-201ENST00000287600 PLAGL2Q9UPG8 496 aa17.19■□□□□ 0.34
PDE6D-201ENST00000287600 MYO7AQ13402 2215 aa17.19■□□□□ 0.34
PDE6D-201ENST00000287600 COL1A2P08123 1366 aa17.18■□□□□ 0.34
PDE6D-201ENST00000287600 IGKV6D-21A0A0A0MT36 114 aa17.18■□□□□ 0.34
PDE6D-201ENST00000287600 KLRC1P26715 233 aa17.18■□□□□ 0.34
PDE6D-201ENST00000287600 LTBRP36941 435 aa17.18■□□□□ 0.34
PDE6D-201ENST00000287600 MCM2P49736 904 aa17.18■□□□□ 0.34
PDE6D-201ENST00000287600 HMGN5P82970 282 aaKnown RBP17.18■□□□□ 0.34
PDE6D-201ENST00000287600 ZP2Q05996 745 aa17.18■□□□□ 0.34
PDE6D-201ENST00000287600 NFX1Q12986 1120 aaKnown RBP17.18■□□□□ 0.34
PDE6D-201ENST00000287600 MIS18BP1Q6P0N0 1132 aa17.18■□□□□ 0.34
PDE6D-201ENST00000287600 PDXDC2PQ6P474 469 aa17.18■□□□□ 0.34
PDE6D-201ENST00000287600 ABHD15Q6UXT9 468 aa17.18■□□□□ 0.34
PDE6D-201ENST00000287600 PIK3AP1Q6ZUJ8 805 aa17.18■□□□□ 0.34
PDE6D-201ENST00000287600 CKAP2LQ8IYA6 745 aa17.18■□□□□ 0.34
PDE6D-201ENST00000287600 FAM184AQ8NB25 1140 aa17.18■□□□□ 0.34
PDE6D-201ENST00000287600 LENG9Q96B70 501 aa17.18■□□□□ 0.34
PDE6D-201ENST00000287600 TBC1D22BQ9NU19 505 aa17.18■□□□□ 0.34
PDE6D-201ENST00000287600 TCEAL9Q9UHQ7 104 aa17.18■□□□□ 0.34
PDE6D-201ENST00000287600 ARIH1Q9Y4X5 557 aaPredicted RBP17.18■□□□□ 0.34
PDE6D-201ENST00000287600 PRR33A8MZF0 331 aa17.17■□□□□ 0.34
PDE6D-201ENST00000287600 BTBD18B2RXH4 712 aa17.17■□□□□ 0.34
PDE6D-201ENST00000287600 DHX15O43143 795 aaKnown RBP17.17■□□□□ 0.34
PDE6D-201ENST00000287600 TBX10O75333 385 aa17.17■□□□□ 0.34
PDE6D-201ENST00000287600 RPS6KA5O75582 802 aa17.17■□□□□ 0.34
PDE6D-201ENST00000287600 TDP2O95551 362 aa17.17■□□□□ 0.34
PDE6D-201ENST00000287600 ITGB1P05556 798 aa17.17■□□□□ 0.34
PDE6D-201ENST00000287600 GTF2F1P35269 517 aaKnown RBP eCLIP17.17■□□□□ 0.348e-7■■■■□ 24.7
PDE6D-201ENST00000287600 GATMP50440 423 aa17.17■□□□□ 0.34
PDE6D-201ENST00000287600 GUCY1B3Q02153 619 aa17.17■□□□□ 0.34
PDE6D-201ENST00000287600 DLX2Q07687 328 aaPredicted RBP17.17■□□□□ 0.34
PDE6D-201ENST00000287600 NR5A1Q13285 461 aa17.17■□□□□ 0.34
PDE6D-201ENST00000287600 CSPP1Q1MSJ5 1256 aa17.17■□□□□ 0.34
PDE6D-201ENST00000287600 CTC1Q2NKJ3 1217 aa17.17■□□□□ 0.34
PDE6D-201ENST00000287600 LETM2Q2VYF4 491 aa17.17■□□□□ 0.34
PDE6D-201ENST00000287600 NAALADL2Q58DX5 795 aa17.17■□□□□ 0.34
PDE6D-201ENST00000287600 ADHFE1Q8IWW8 467 aa17.17■□□□□ 0.34
PDE6D-201ENST00000287600 DIS3L2Q8IYB7 885 aaKnown RBP17.17■□□□□ 0.34
PDE6D-201ENST00000287600 C8orf76Q96K31 380 aa17.17■□□□□ 0.34
PDE6D-201ENST00000287600 TMX1Q9H3N1 280 aa17.17■□□□□ 0.34
PDE6D-201ENST00000287600 PLXNA4Q9HCM2 1894 aa17.17■□□□□ 0.34
PDE6D-201ENST00000287600 MYH9P35579 1960 aaKnown RBP17.17■□□□□ 0.34
PDE6D-201ENST00000287600 EVPLQ92817 2033 aa17.16■□□□□ 0.34
PDE6D-201ENST00000287600 CYP3A7-CYP3A51PA0A087WV96 503 aa17.16■□□□□ 0.34
PDE6D-201ENST00000287600 DENND3A2RUS2 1198 aa17.16■□□□□ 0.34
PDE6D-201ENST00000287600 MSH4O15457 936 aa17.16■□□□□ 0.34
PDE6D-201ENST00000287600 LINC01565O15544 149 aa17.16■□□□□ 0.34
PDE6D-201ENST00000287600 DCXO43602 365 aa17.16■□□□□ 0.34
PDE6D-201ENST00000287600 CYP3A7P24462 503 aa17.16■□□□□ 0.34
PDE6D-201ENST00000287600 SARSP49591 514 aaKnown RBP17.16■□□□□ 0.34
PDE6D-201ENST00000287600 NDUFV1P49821 464 aa17.16■□□□□ 0.34
PDE6D-201ENST00000287600 EARS2Q5JPH6 523 aaKnown RBP17.16■□□□□ 0.34
PDE6D-201ENST00000287600 ZNF484Q5JVG2 852 aa17.16■□□□□ 0.34
PDE6D-201ENST00000287600 ODR4Q5SWX8 454 aa17.16■□□□□ 0.34
PDE6D-201ENST00000287600 SWSAP1Q6NVH7 229 aa17.16■□□□□ 0.34
PDE6D-201ENST00000287600 NEK8Q86SG6 692 aa17.16■□□□□ 0.34
PDE6D-201ENST00000287600 CRIPAKQ8N1N5 446 aa17.16■□□□□ 0.34
PDE6D-201ENST00000287600 KLHL23Q8NBE8 558 aa17.16■□□□□ 0.34
PDE6D-201ENST00000287600 POF1BQ8WVV4 589 aa17.16■□□□□ 0.34
PDE6D-201ENST00000287600 PPP1R16BQ96T49 567 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms