RNA–Protein interactions for RNA: ENST00000285398.6

ERCC3-201, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC3, Length 2,750 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-201ENST00000285398 MIIPQ5JXC2 388 aa11.46□□□□□ -0.58
ERCC3-201ENST00000285398 AGBL2Q5U5Z8 902 aa11.46□□□□□ -0.58
ERCC3-201ENST00000285398 AP1ARQ63HQ0 302 aa11.46□□□□□ -0.58
ERCC3-201ENST00000285398 PIK3AP1Q6ZUJ8 805 aa11.46□□□□□ -0.58
ERCC3-201ENST00000285398 KIRREL3Q8IZU9 778 aa11.46□□□□□ -0.58
ERCC3-201ENST00000285398 RAPGEF5Q92565 580 aa11.46□□□□□ -0.58
ERCC3-201ENST00000285398 ANKS1AQ92625 1134 aa11.46□□□□□ -0.58
ERCC3-201ENST00000285398 SAAL1Q96ER3 474 aa11.46□□□□□ -0.58
ERCC3-201ENST00000285398 KANSL2Q9H9L4 492 aa11.46□□□□□ -0.58
ERCC3-201ENST00000285398 MYH10P35580 1976 aa11.46□□□□□ -0.58
ERCC3-201ENST00000285398 GSTA1P08263 222 aa11.45□□□□□ -0.58
ERCC3-201ENST00000285398 TMOD1P28289 359 aa11.45□□□□□ -0.58
ERCC3-201ENST00000285398 CAP2P40123 477 aa11.45□□□□□ -0.58
ERCC3-201ENST00000285398 GRM4Q14833 912 aa11.45□□□□□ -0.58
ERCC3-201ENST00000285398 C4orf32Q8N8J7 132 aa11.45□□□□□ -0.58
ERCC3-201ENST00000285398 SPAG5Q96R06 1193 aa11.45□□□□□ -0.58
ERCC3-201ENST00000285398 WRNIP1Q96S55 665 aa11.45□□□□□ -0.58
ERCC3-201ENST00000285398 ISCUQ9H1K1 167 aa11.45□□□□□ -0.58
ERCC3-201ENST00000285398 LUC7LQ9NQ29 371 aaKnown RBP11.45□□□□□ -0.58
ERCC3-201ENST00000285398 HOMER3Q9NSC5 361 aa11.45□□□□□ -0.58
ERCC3-201ENST00000285398 F5H6K3 240 aa11.45□□□□□ -0.58
ERCC3-201ENST00000285398 CALM1P0DP23 149 aa11.45□□□□□ -0.58
ERCC3-201ENST00000285398 CALM2P0DP24 149 aa11.45□□□□□ -0.58
ERCC3-201ENST00000285398 CALM3P0DP25 149 aa11.45□□□□□ -0.58
ERCC3-201ENST00000285398 PPP1R2P41236 205 aa11.45□□□□□ -0.58
ERCC3-201ENST00000285398 KLRC3Q07444 240 aa11.45□□□□□ -0.58
ERCC3-201ENST00000285398 MYO1EQ12965 1108 aa11.45□□□□□ -0.58
ERCC3-201ENST00000285398 MTMR3Q13615 1198 aa11.45□□□□□ -0.58
ERCC3-201ENST00000285398 BYSLQ13895 437 aaKnown RBP11.45□□□□□ -0.58
ERCC3-201ENST00000285398 ACCSLQ4AC99 568 aa11.45□□□□□ -0.58
ERCC3-201ENST00000285398 LMBR1Q8WVP7 490 aa11.45□□□□□ -0.58
ERCC3-201ENST00000285398 CNOT10Q9H9A5 744 aaKnown RBP11.45□□□□□ -0.58
ERCC3-201ENST00000285398 C15orf41Q9Y2V0 281 aa11.45□□□□□ -0.58
ERCC3-201ENST00000285398 PLIN4Q96Q06 1357 aa11.45□□□□□ -0.58
ERCC3-201ENST00000285398 PALM3A6NDB9 673 aaPredicted RBP11.45□□□□□ -0.58
ERCC3-201ENST00000285398 CFAP73A6NFT4 308 aa11.45□□□□□ -0.58
ERCC3-201ENST00000285398 CCT8L1PA6NM43 557 aa11.45□□□□□ -0.58
ERCC3-201ENST00000285398 H0YGN5 161 aa11.45□□□□□ -0.58
ERCC3-201ENST00000285398 SKAP2O75563 359 aaPredicted RBP11.45□□□□□ -0.58
ERCC3-201ENST00000285398 CCNE1P24864 410 aa11.45□□□□□ -0.58
ERCC3-201ENST00000285398 KIF5BP33176 963 aa11.45□□□□□ -0.58
ERCC3-201ENST00000285398 SLC1A4P43007 532 aa11.45□□□□□ -0.58
ERCC3-201ENST00000285398 ZNF844Q08AG5 666 aa11.45□□□□□ -0.58
ERCC3-201ENST00000285398 MAP1SQ66K74 1059 aaPredicted RBP11.45□□□□□ -0.58
ERCC3-201ENST00000285398 SULF1Q8IWU6 871 aa11.45□□□□□ -0.58
ERCC3-201ENST00000285398 CCDC63Q8NA47 563 aa11.45□□□□□ -0.58
ERCC3-201ENST00000285398 CCDC197Q8NCU1 140 aa11.45□□□□□ -0.58
ERCC3-201ENST00000285398 P2RX5Q93086 422 aa11.45□□□□□ -0.58
ERCC3-201ENST00000285398 DCPSQ96C86 337 aaKnown RBP11.45□□□□□ -0.58
ERCC3-201ENST00000285398 MTMR8Q96EF0 704 aa11.45□□□□□ -0.58
ERCC3-201ENST00000285398 PIGSQ96S52 555 aa11.45□□□□□ -0.58
ERCC3-201ENST00000285398 TRPC6Q9Y210 931 aa11.45□□□□□ -0.58
ERCC3-201ENST00000285398 CLEC11AQ9Y240 323 aa11.45□□□□□ -0.58
ERCC3-201ENST00000285398 SH3BP1Q9Y3L3 701 aa11.45□□□□□ -0.58
ERCC3-201ENST00000285398 NFS1Q9Y697 457 aa11.45□□□□□ -0.58
ERCC3-201ENST00000285398 BUB1O43683 1085 aa11.44□□□□□ -0.58
ERCC3-201ENST00000285398 NDUFB10O96000 172 aa11.44□□□□□ -0.58
ERCC3-201ENST00000285398 NOVP48745 357 aa11.44□□□□□ -0.58
ERCC3-201ENST00000285398 ADCY2Q08462 1091 aa11.44□□□□□ -0.58
ERCC3-201ENST00000285398 SLFN13Q68D06 897 aa11.44□□□□□ -0.58
ERCC3-201ENST00000285398 BZW1Q7L1Q6 419 aaKnown RBP11.44□□□□□ -0.58
ERCC3-201ENST00000285398 STAMBPL1Q96FJ0 436 aa11.44□□□□□ -0.58
ERCC3-201ENST00000285398 THOC1Q96FV9 657 aaKnown RBP11.44□□□□□ -0.58
ERCC3-201ENST00000285398 CHMP6Q96FZ7 201 aa11.44□□□□□ -0.58
ERCC3-201ENST00000285398 KBTBD4Q9NVX7 518 aa11.44□□□□□ -0.58
ERCC3-201ENST00000285398 SALL4Q9UJQ4 1053 aa11.44□□□□□ -0.58
ERCC3-201ENST00000285398 TRAF5O00463 557 aa11.44□□□□□ -0.58
ERCC3-201ENST00000285398 RAD51CO43502 376 aa11.44□□□□□ -0.58
ERCC3-201ENST00000285398 ANP32DO95626 131 aa11.44□□□□□ -0.58
ERCC3-201ENST00000285398 IKQ13123 557 aaPredicted RBP11.44□□□□□ -0.58
ERCC3-201ENST00000285398 HEATR3Q7Z4Q2 680 aa11.44□□□□□ -0.58
ERCC3-201ENST00000285398 APOBEC3FQ8IUX4 373 aaKnown RBP11.44□□□□□ -0.58
ERCC3-201ENST00000285398 ZNF341Q9BYN7 854 aa11.44□□□□□ -0.58
ERCC3-201ENST00000285398 ZNF408Q9H9D4 720 aa11.44□□□□□ -0.58
ERCC3-201ENST00000285398 KIF9Q9HAQ2 790 aa11.44□□□□□ -0.58
ERCC3-201ENST00000285398 SSU72P8A0A1W2PR75 194 aa11.43□□□□□ -0.58
ERCC3-201ENST00000285398 MYBP10242 640 aa11.43□□□□□ -0.58
ERCC3-201ENST00000285398 DRD4P21917 467 aa11.43□□□□□ -0.58
ERCC3-201ENST00000285398 NLRP5P59047 1200 aa11.43□□□□□ -0.58
ERCC3-201ENST00000285398 CCDC178Q5BJE1 867 aa11.43□□□□□ -0.58
ERCC3-201ENST00000285398 CDCA2Q69YH5 1023 aaPredicted RBP11.43□□□□□ -0.58
ERCC3-201ENST00000285398 CAPRIN2Q6IMN6 1127 aaKnown RBP11.43□□□□□ -0.58
ERCC3-201ENST00000285398 ANKRD13CQ8N6S4 541 aa11.43□□□□□ -0.58
ERCC3-201ENST00000285398 RASGRP4Q8TDF6 673 aa11.43□□□□□ -0.58
ERCC3-201ENST00000285398 RRAGCQ9HB90 399 aa11.43□□□□□ -0.58
ERCC3-201ENST00000285398 NOP53Q9NZM5 478 aaKnown RBP11.43□□□□□ -0.58
ERCC3-201ENST00000285398 NOVA2Q9UNW9 492 aaKnown RBP11.43□□□□□ -0.58
ERCC3-201ENST00000285398 ANKRD33BA6NCL7 494 aa11.43□□□□□ -0.58
ERCC3-201ENST00000285398 USP17L10C9JJH3 530 aa11.43□□□□□ -0.58
ERCC3-201ENST00000285398 CLTAP09496 248 aa11.43□□□□□ -0.58
ERCC3-201ENST00000285398 SCG2P13521 617 aa11.43□□□□□ -0.58
ERCC3-201ENST00000285398 ZNF543Q08ER8 600 aa11.43□□□□□ -0.58
ERCC3-201ENST00000285398 ANKRD40Q6AI12 368 aa11.43□□□□□ -0.58
ERCC3-201ENST00000285398 OR2W6PQ8NHA6 318 aa11.43□□□□□ -0.58
ERCC3-201ENST00000285398 TCP11Q8WWU5 503 aa11.43□□□□□ -0.58
ERCC3-201ENST00000285398 CENPTQ96BT3 561 aa11.43□□□□□ -0.58
ERCC3-201ENST00000285398 NMRK2Q9NPI5 230 aa11.43□□□□□ -0.58
ERCC3-201ENST00000285398 FBXO28Q9NVF7 368 aa11.43□□□□□ -0.58
ERCC3-201ENST00000285398 SLC12A4Q9UP95 1085 aa11.43□□□□□ -0.58
ERCC3-201ENST00000285398 SIK3Q9Y2K2 1263 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms