RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 PICK1Q9NRD5 415 aa20.05■□□□□ 0.8
PDLIM3-201ENST00000284767 ZNF112Q9UJU3 913 aa20.05■□□□□ 0.8
PDLIM3-201ENST00000284767 SIK3Q9Y2K2 1263 aa20.05■□□□□ 0.8
PDLIM3-201ENST00000284767 DOCK1Q14185 1865 aa20.04■□□□□ 0.8
PDLIM3-201ENST00000284767 SFI1A8K8P3 1242 aa20.04■□□□□ 0.8
PDLIM3-201ENST00000284767 PJA2O43164 708 aa20.04■□□□□ 0.8
PDLIM3-201ENST00000284767 EIF2AK2P19525 551 aaKnown RBP20.04■□□□□ 0.8
PDLIM3-201ENST00000284767 PAFAH1B1P43034 410 aa20.04■□□□□ 0.8
PDLIM3-201ENST00000284767 APOBEC3FQ8IUX4 373 aaKnown RBP20.04■□□□□ 0.8
PDLIM3-201ENST00000284767 SUGP1Q8IWZ8 645 aaKnown RBP20.04■□□□□ 0.8
PDLIM3-201ENST00000284767 BCAS4Q8TDM0 211 aa20.04■□□□□ 0.8
PDLIM3-201ENST00000284767 SCFD1Q8WVM8 642 aa20.04■□□□□ 0.8
PDLIM3-201ENST00000284767 TAAR1Q96RJ0 339 aa20.04■□□□□ 0.8
PDLIM3-201ENST00000284767 RUFY1Q96T51 708 aa20.04■□□□□ 0.8
PDLIM3-201ENST00000284767 HSF2BPO75031 334 aa20.04■□□□□ 0.8
PDLIM3-201ENST00000284767 CLSTN1O94985 981 aa20.04■□□□□ 0.8
PDLIM3-201ENST00000284767 RPS6P62753 249 aaKnown RBP20.04■□□□□ 0.8
PDLIM3-201ENST00000284767 GNGT1P63211 74 aa20.04■□□□□ 0.8
PDLIM3-201ENST00000284767 SYTL5Q8TDW5 730 aaPredicted RBP20.04■□□□□ 0.8
PDLIM3-201ENST00000284767 FAM169AQ9Y6X4 670 aa20.04■□□□□ 0.8
PDLIM3-201ENST00000284767 IPO5O00410 1097 aaKnown RBP20.03■□□□□ 0.8
PDLIM3-201ENST00000284767 VWA5AO00534 786 aa20.03■□□□□ 0.8
PDLIM3-201ENST00000284767 EIF4A3P38919 411 aaKnown RBP20.03■□□□□ 0.8
PDLIM3-201ENST00000284767 NFRKBQ6P4R8 1299 aa20.03■□□□□ 0.8
PDLIM3-201ENST00000284767 NSMFQ6X4W1 530 aa20.03■□□□□ 0.8
PDLIM3-201ENST00000284767 SFR1Q86XK3 245 aa20.03■□□□□ 0.8
PDLIM3-201ENST00000284767 KLRG1Q96E93 195 aa20.03■□□□□ 0.8
PDLIM3-201ENST00000284767 MXRA8Q9BRK3 442 aa20.03■□□□□ 0.8
PDLIM3-201ENST00000284767 TSKSQ9UJT2 592 aa20.03■□□□□ 0.8
PDLIM3-201ENST00000284767 RABGAP1Q9Y3P9 1069 aa20.03■□□□□ 0.8
PDLIM3-201ENST00000284767 AKR1B10O60218 316 aa20.03■□□□□ 0.8
PDLIM3-201ENST00000284767 MRPS9P82933 396 aaKnown RBP20.03■□□□□ 0.8
PDLIM3-201ENST00000284767 MICALL1Q8N3F8 863 aa20.03■□□□□ 0.8
PDLIM3-201ENST00000284767 DRC1Q96MC2 740 aa20.03■□□□□ 0.8
PDLIM3-201ENST00000284767 POLR3CQ9BUI4 534 aaPredicted RBP20.03■□□□□ 0.8
PDLIM3-201ENST00000284767 NDST4Q9H3R1 872 aa20.03■□□□□ 0.8
PDLIM3-201ENST00000284767 YY1AP1Q9H869 796 aa20.03■□□□□ 0.8
PDLIM3-201ENST00000284767 EHMT1Q9H9B1 1298 aa20.03■□□□□ 0.8
PDLIM3-201ENST00000284767 KCNH7Q9NS40 1196 aa20.03■□□□□ 0.8
PDLIM3-201ENST00000284767 CTDP1Q9Y5B0 961 aaPredicted RBP20.03■□□□□ 0.8
PDLIM3-201ENST00000284767 MYH10P35580 1976 aa20.03■□□□□ 0.8
PDLIM3-201ENST00000284767 ERLIN2O94905 339 aa20.02■□□□□ 0.8
PDLIM3-201ENST00000284767 FGFR1OPO95684 399 aaKnown RBP20.02■□□□□ 0.8
PDLIM3-201ENST00000284767 PPP2R5CQ13362 524 aa20.02■□□□□ 0.8
PDLIM3-201ENST00000284767 ZCWPW2Q504Y3 356 aa20.02■□□□□ 0.8
PDLIM3-201ENST00000284767 BANK1Q8NDB2 785 aa20.02■□□□□ 0.8
PDLIM3-201ENST00000284767 RNF14Q9UBS8 474 aa20.02■□□□□ 0.8
PDLIM3-201ENST00000284767 FRMD3A2A2Y4 597 aa20.02■□□□□ 0.8
PDLIM3-201ENST00000284767 TRAF5O00463 557 aa20.02■□□□□ 0.8
PDLIM3-201ENST00000284767 LRRC63Q05C16 580 aa20.02■□□□□ 0.8
PDLIM3-201ENST00000284767 MAN2A1Q16706 1144 aa20.02■□□□□ 0.8
PDLIM3-201ENST00000284767 C8orf74Q6P047 294 aa20.02■□□□□ 0.8
PDLIM3-201ENST00000284767 MMS22LQ6ZRQ5 1243 aa20.02■□□□□ 0.8
PDLIM3-201ENST00000284767 GPIHBP1Q8IV16 184 aa20.02■□□□□ 0.8
PDLIM3-201ENST00000284767 RNF10Q8N5U6 811 aaKnown RBP20.02■□□□□ 0.8
PDLIM3-201ENST00000284767 ATXN2Q99700 1313 aaKnown RBP20.02■□□□□ 0.79
PDLIM3-201ENST00000284767 APBA1Q02410 837 aa20.01■□□□□ 0.79
PDLIM3-201ENST00000284767 EDEM3Q9BZQ6 932 aa20.01■□□□□ 0.79
PDLIM3-201ENST00000284767 RBBP6Q7Z6E9 1792 aaKnown RBP20.01■□□□□ 0.79
PDLIM3-201ENST00000284767 RPTORQ8N122 1335 aa20.01■□□□□ 0.79
PDLIM3-201ENST00000284767 PEX10O60683 326 aa20.01■□□□□ 0.79
PDLIM3-201ENST00000284767 MYBP10242 640 aa20.01■□□□□ 0.79
PDLIM3-201ENST00000284767 GUCY2CP25092 1073 aa20.01■□□□□ 0.79
PDLIM3-201ENST00000284767 HOXA7P31268 230 aaPredicted RBP20.01■□□□□ 0.79
PDLIM3-201ENST00000284767 MATR3P43243 847 aaKnown RBP eCLIP20.01■□□□□ 0.79
PDLIM3-201ENST00000284767 MAGEA1P43355 309 aa20.01■□□□□ 0.79
PDLIM3-201ENST00000284767 SLC7A5Q01650 507 aa20.01■□□□□ 0.79
PDLIM3-201ENST00000284767 SKIDA1Q1XH10 827 aa20.01■□□□□ 0.79
PDLIM3-201ENST00000284767 TSEN2Q8NCE0 465 aaKnown RBP20.01■□□□□ 0.79
PDLIM3-201ENST00000284767 IKZF4Q9H2S9 585 aa20.01■□□□□ 0.79
PDLIM3-201ENST00000284767 GINM1Q9NU53 330 aa20.01■□□□□ 0.79
PDLIM3-201ENST00000284767 ZBED4O75132 1171 aa20■□□□□ 0.79
PDLIM3-201ENST00000284767 EYA4O95677 639 aa20■□□□□ 0.79
PDLIM3-201ENST00000284767 MYCLP12524 364 aaPredicted RBP20■□□□□ 0.79
PDLIM3-201ENST00000284767 ITGB3BPQ13352 177 aaPredicted RBP20■□□□□ 0.79
PDLIM3-201ENST00000284767 TTMPQ5BVD1 217 aa20■□□□□ 0.79
PDLIM3-201ENST00000284767 RINT1Q6NUQ1 792 aa20■□□□□ 0.79
PDLIM3-201ENST00000284767 TRMT1LQ7Z2T5 733 aaKnown RBP20■□□□□ 0.79
PDLIM3-201ENST00000284767 CNKSR2Q8WXI2 1034 aa20■□□□□ 0.79
PDLIM3-201ENST00000284767 HINFPQ9BQA5 517 aa20■□□□□ 0.79
PDLIM3-201ENST00000284767 SPON1Q9HCB6 807 aa20■□□□□ 0.79
PDLIM3-201ENST00000284767 FAM207AQ9NSI2 230 aaPredicted RBP20■□□□□ 0.79
PDLIM3-201ENST00000284767 PITPNM2Q9BZ72 1349 aa20■□□□□ 0.79
PDLIM3-201ENST00000284767 EPHB6O15197 1021 aa20■□□□□ 0.79
PDLIM3-201ENST00000284767 KCNA1Q09470 495 aa20■□□□□ 0.79
PDLIM3-201ENST00000284767 MCF2L2Q86YR7 1114 aa20■□□□□ 0.79
PDLIM3-201ENST00000284767 IFT20Q8IY31 132 aa20■□□□□ 0.79
PDLIM3-201ENST00000284767 NOX5Q96PH1 765 aa20■□□□□ 0.79
PDLIM3-201ENST00000284767 TSG101Q99816 390 aa20■□□□□ 0.79
PDLIM3-201ENST00000284767 KCTD10Q9H3F6 313 aa20■□□□□ 0.79
PDLIM3-201ENST00000284767 AS3MTQ9HBK9 375 aa20■□□□□ 0.79
PDLIM3-201ENST00000284767 SSU72P8A0A1W2PR75 194 aa19.99■□□□□ 0.79
PDLIM3-201ENST00000284767 LRRC53A6NM62 1247 aa19.99■□□□□ 0.79
PDLIM3-201ENST00000284767 SLC26A4O43511 780 aa19.99■□□□□ 0.79
PDLIM3-201ENST00000284767 HOXD13P35453 343 aa19.99■□□□□ 0.79
PDLIM3-201ENST00000284767 CFAP221Q4G0U5 840 aa19.99■□□□□ 0.79
PDLIM3-201ENST00000284767 PLCD3Q8N3E9 789 aa19.99■□□□□ 0.79
PDLIM3-201ENST00000284767 TEKT3Q9BXF9 490 aa19.99■□□□□ 0.79
PDLIM3-201ENST00000284767 TLR10Q9BXR5 811 aa19.99■□□□□ 0.79
PDLIM3-201ENST00000284767 MMRN2Q9H8L6 949 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms