RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 CAMTA1Q9Y6Y1 1673 aa9.95□□□□□ -0.82
PDGFC-201ENST00000274071 MYH2Q9UKX2 1941 aa9.95□□□□□ -0.82
PDGFC-201ENST00000274071 KANSL1LA0AUZ9 987 aa9.95□□□□□ -0.82
PDGFC-201ENST00000274071 MYCLP1P12525 358 aaPredicted RBP9.95□□□□□ -0.82
PDGFC-201ENST00000274071 EPHA10Q5JZY3 1008 aa9.95□□□□□ -0.82
PDGFC-201ENST00000274071 TRIM67Q6ZTA4 783 aa9.95□□□□□ -0.82
PDGFC-201ENST00000274071 BRINP3Q76B58 766 aa9.95□□□□□ -0.82
PDGFC-201ENST00000274071 IRF2BP1Q8IU81 584 aa9.95□□□□□ -0.82
PDGFC-201ENST00000274071 HELBQ8NG08 1087 aaPredicted RBP9.95□□□□□ -0.82
PDGFC-201ENST00000274071 MTMR8Q96EF0 704 aa9.95□□□□□ -0.82
PDGFC-201ENST00000274071 TTYH3Q9C0H2 523 aa9.95□□□□□ -0.82
PDGFC-201ENST00000274071 VPS54Q9P1Q0 977 aa9.95□□□□□ -0.82
PDGFC-201ENST00000274071 NDUFB9Q9Y6M9 179 aa9.95□□□□□ -0.82
PDGFC-201ENST00000274071 SMIM23A6NLE4 172 aa9.95□□□□□ -0.82
PDGFC-201ENST00000274071 SERPINB7O75635 380 aa9.95□□□□□ -0.82
PDGFC-201ENST00000274071 LMNAP02545 664 aaKnown RBP9.95□□□□□ -0.82
PDGFC-201ENST00000274071 COL6A2P12110 1019 aa9.95□□□□□ -0.82
PDGFC-201ENST00000274071 PLCG2P16885 1265 aa9.95□□□□□ -0.82
PDGFC-201ENST00000274071 EPHB2P29323 1055 aa9.95□□□□□ -0.82
PDGFC-201ENST00000274071 ARFIP2P53365 341 aa9.95□□□□□ -0.82
PDGFC-201ENST00000274071 PDE1BQ01064 536 aa9.95□□□□□ -0.82
PDGFC-201ENST00000274071 NSUN2Q08J23 767 aaKnown RBP eCLIP9.95□□□□□ -0.82
PDGFC-201ENST00000274071 ZCWPW2Q504Y3 356 aa9.95□□□□□ -0.82
PDGFC-201ENST00000274071 OLFM3Q96PB7 478 aa9.95□□□□□ -0.82
PDGFC-201ENST00000274071 GSDMAQ96QA5 445 aa9.95□□□□□ -0.82
PDGFC-201ENST00000274071 ALG1Q9BT22 464 aa9.95□□□□□ -0.82
PDGFC-201ENST00000274071 TXLNGQ9NUQ3 528 aa9.95□□□□□ -0.82
PDGFC-201ENST00000274071 RASAL2Q9UJF2 1139 aa9.95□□□□□ -0.82
PDGFC-201ENST00000274071 HAO1Q9UJM8 370 aa9.95□□□□□ -0.82
PDGFC-201ENST00000274071 FRMD4BQ9Y2L6 1034 aa9.95□□□□□ -0.82
PDGFC-201ENST00000274071 ZNF609O15014 1411 aa9.95□□□□□ -0.82
PDGFC-201ENST00000274071 TLDC2A0PJX2 215 aa9.94□□□□□ -0.82
PDGFC-201ENST00000274071 GRID2IPA4D2P6 1211 aa9.94□□□□□ -0.82
PDGFC-201ENST00000274071 TMEM110-MUSTN1A8MSY1 372 aa9.94□□□□□ -0.82
PDGFC-201ENST00000274071 BUB1O43683 1085 aa9.94□□□□□ -0.82
PDGFC-201ENST00000274071 ANXA1P04083 346 aa9.94□□□□□ -0.82
PDGFC-201ENST00000274071 TATP17735 454 aaPredicted RBP9.94□□□□□ -0.82
PDGFC-201ENST00000274071 PMS2P54278 862 aa9.94□□□□□ -0.82
PDGFC-201ENST00000274071 EIF3BP55884 814 aaKnown RBP9.94□□□□□ -0.82
PDGFC-201ENST00000274071 ARPC4P59998 168 aa9.94□□□□□ -0.82
PDGFC-201ENST00000274071 CYLC2Q14093 348 aaPredicted RBP9.94□□□□□ -0.82
PDGFC-201ENST00000274071 NEPROQ6NW34 567 aa9.94□□□□□ -0.82
PDGFC-201ENST00000274071 LRRC8BQ6P9F7 803 aa9.94□□□□□ -0.82
PDGFC-201ENST00000274071 C3orf62Q6ZUJ4 267 aa9.94□□□□□ -0.82
PDGFC-201ENST00000274071 KBTBD2Q8IY47 623 aa9.94□□□□□ -0.82
PDGFC-201ENST00000274071 GAB3Q8WWW8 586 aa9.94□□□□□ -0.82
PDGFC-201ENST00000274071 LPIN2Q92539 896 aa9.94□□□□□ -0.82
PDGFC-201ENST00000274071 PGM2Q96G03 612 aa9.94□□□□□ -0.82
PDGFC-201ENST00000274071 PAGE5Q96GU1 130 aa9.94□□□□□ -0.82
PDGFC-201ENST00000274071 EIF2AQ9BY44 585 aaKnown RBP9.94□□□□□ -0.82
PDGFC-201ENST00000274071 FAIMQ9NVQ4 179 aa9.94□□□□□ -0.82
PDGFC-201ENST00000274071 DDX43Q9NXZ2 648 aaKnown RBP9.94□□□□□ -0.82
PDGFC-201ENST00000274071 RABL2AQ9UBK7 228 aaPredicted RBP9.94□□□□□ -0.82
PDGFC-201ENST00000274071 SEC63Q9UGP8 760 aaKnown RBP9.94□□□□□ -0.82
PDGFC-201ENST00000274071 TMEM59LQ9UK28 342 aa9.94□□□□□ -0.82
PDGFC-201ENST00000274071 ANGEL1Q9UNK9 670 aaKnown RBP9.94□□□□□ -0.82
PDGFC-201ENST00000274071 LAMA4Q16363 1823 aa9.94□□□□□ -0.82
PDGFC-201ENST00000274071 XIRP1Q702N8 1843 aaKnown RBP9.94□□□□□ -0.82
PDGFC-201ENST00000274071 PASKQ96RG2 1323 aa9.94□□□□□ -0.82
PDGFC-201ENST00000274071 KLF18A0A0U1RQI7 1052 aa9.94□□□□□ -0.82
PDGFC-201ENST00000274071 DYTNA2CJ06 578 aa9.94□□□□□ -0.82
PDGFC-201ENST00000274071 SPDYE16A6NNV3 312 aaPredicted RBP9.94□□□□□ -0.82
PDGFC-201ENST00000274071 LGALS16A8MUM7 142 aa9.94□□□□□ -0.82
PDGFC-201ENST00000274071 BTBD19C9JJ37 291 aa9.94□□□□□ -0.82
PDGFC-201ENST00000274071 OR6B1O95007 311 aa9.94□□□□□ -0.82
PDGFC-201ENST00000274071 TARSP26639 723 aaKnown RBP9.94□□□□□ -0.82
PDGFC-201ENST00000274071 KLK7P49862 253 aa9.94□□□□□ -0.82
PDGFC-201ENST00000274071 NEK3P51956 506 aa9.94□□□□□ -0.82
PDGFC-201ENST00000274071 TNNC1P63316 161 aa9.94□□□□□ -0.82
PDGFC-201ENST00000274071 CNGA2Q16280 664 aa9.94□□□□□ -0.82
PDGFC-201ENST00000274071 KLHL35Q6PF15 583 aa9.94□□□□□ -0.82
PDGFC-201ENST00000274071 LRRC74BQ6ZQY2 392 aa9.94□□□□□ -0.82
PDGFC-201ENST00000274071 PEX5LQ8IYB4 626 aa9.94□□□□□ -0.82
PDGFC-201ENST00000274071 FBXL16Q8N461 479 aa9.94□□□□□ -0.82
PDGFC-201ENST00000274071 HSPBAP1Q96EW2 488 aa9.94□□□□□ -0.82
PDGFC-201ENST00000274071 MAML3Q96JK9 1138 aa9.94□□□□□ -0.82
PDGFC-201ENST00000274071 INPP4AQ96PE3 977 aaPredicted RBP9.94□□□□□ -0.82
PDGFC-201ENST00000274071 ZNF184Q99676 751 aaPredicted RBP9.94□□□□□ -0.82
PDGFC-201ENST00000274071 LBHD1Q9BQE6 289 aaPredicted RBP9.94□□□□□ -0.82
PDGFC-201ENST00000274071 TBCCD1Q9NVR7 557 aa9.94□□□□□ -0.82
PDGFC-201ENST00000274071 RWDD2AQ9UIY3 292 aa9.94□□□□□ -0.82
PDGFC-201ENST00000274071 A0A087X0B3 334 aa9.93□□□□□ -0.82
PDGFC-201ENST00000274071 PI4KAP2A4QPH2 592 aa9.93□□□□□ -0.82
PDGFC-201ENST00000274071 GOLGA8BA8MQT2 603 aa9.93□□□□□ -0.82
PDGFC-201ENST00000274071 BHMG1C9JSJ3 638 aaPredicted RBP9.93□□□□□ -0.82
PDGFC-201ENST00000274071 DAPK3O43293 454 aa9.93□□□□□ -0.82
PDGFC-201ENST00000274071 TOB1P50616 345 aaPredicted RBP9.93□□□□□ -0.82
PDGFC-201ENST00000274071 DMPKQ09013 629 aa9.93□□□□□ -0.82
PDGFC-201ENST00000274071 LRRC14Q15048 493 aa9.93□□□□□ -0.82
PDGFC-201ENST00000274071 SH3RF1Q7Z6J0 888 aa9.93□□□□□ -0.82
PDGFC-201ENST00000274071 ECHDC2Q86YB7 292 aa9.93□□□□□ -0.82
PDGFC-201ENST00000274071 NME8Q8N427 588 aa9.93□□□□□ -0.82
PDGFC-201ENST00000274071 PI4KAP1Q8N8J0 262 aa9.93□□□□□ -0.82
PDGFC-201ENST00000274071 USP38Q8NB14 1042 aa9.93□□□□□ -0.82
PDGFC-201ENST00000274071 FBXO41Q8TF61 875 aa9.93□□□□□ -0.82
PDGFC-201ENST00000274071 ATP6V0A1Q93050 837 aa9.93□□□□□ -0.82
PDGFC-201ENST00000274071 SLC7A6OSQ96CW6 309 aaPredicted RBP9.93□□□□□ -0.82
PDGFC-201ENST00000274071 SLAIN2Q9P270 581 aa9.93□□□□□ -0.82
PDGFC-201ENST00000274071 FAM32AQ9Y421 112 aaKnown RBP9.93□□□□□ -0.82
PDGFC-201ENST00000274071 PXDNLA1KZ92 1463 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms