RNA–Protein interactions for RNA: ENST00000269137.11

SS18-201, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SS18, Length 1,836 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-201ENST00000269137 COPB1P53618 953 aaKnown RBP15.57■□□□□ 0.08
SS18-201ENST00000269137 ALCAMQ13740 583 aa15.57■□□□□ 0.08
SS18-201ENST00000269137 PLPPR4Q7Z2D5 763 aa15.57■□□□□ 0.08
SS18-201ENST00000269137 NELFCDQ8IXH7 590 aa15.57■□□□□ 0.08
SS18-201ENST00000269137 SLC17A8Q8NDX2 589 aa15.57■□□□□ 0.08
SS18-201ENST00000269137 MCPH1Q8NEM0 835 aa15.57■□□□□ 0.08
SS18-201ENST00000269137 FAM167AQ96KS9 214 aa15.57■□□□□ 0.08
SS18-201ENST00000269137 CEP63Q96MT8 703 aa15.57■□□□□ 0.08
SS18-201ENST00000269137 SH2D3AQ9BRG2 576 aa15.57■□□□□ 0.08
SS18-201ENST00000269137 AZI2Q9H6S1 392 aa15.57■□□□□ 0.08
SS18-201ENST00000269137 C17orf75Q9HAS0 396 aa15.57■□□□□ 0.08
SS18-201ENST00000269137 NRBP2Q9NSY0 501 aa15.57■□□□□ 0.08
SS18-201ENST00000269137 NRBP1Q9UHY1 535 aa15.57■□□□□ 0.08
SS18-201ENST00000269137 PPME1Q9Y570 386 aa15.57■□□□□ 0.08
SS18-201ENST00000269137 PCDHB13Q9Y5F0 798 aa15.57■□□□□ 0.08
SS18-201ENST00000269137 PPP1R37O75864 691 aa15.57■□□□□ 0.08
SS18-201ENST00000269137 PRPF6O94906 941 aaKnown RBP15.57■□□□□ 0.08
SS18-201ENST00000269137 GH1P01241 217 aa15.57■□□□□ 0.08
SS18-201ENST00000269137 NMT1P30419 496 aaKnown RBP15.57■□□□□ 0.08
SS18-201ENST00000269137 RTP1P59025 263 aa15.57■□□□□ 0.08
SS18-201ENST00000269137 ARHGAP1Q07960 439 aa15.57■□□□□ 0.08
SS18-201ENST00000269137 PAXIP1Q6ZW49 1069 aaPredicted RBP15.57■□□□□ 0.08
SS18-201ENST00000269137 TRMT1LQ7Z2T5 733 aaKnown RBP15.57■□□□□ 0.08
SS18-201ENST00000269137 CCDC186Q7Z3E2 898 aa15.57■□□□□ 0.08
SS18-201ENST00000269137 SOCS4Q8WXH5 440 aa15.57■□□□□ 0.08
SS18-201ENST00000269137 KIFAP3Q92845 792 aa15.57■□□□□ 0.08
SS18-201ENST00000269137 COPS5Q92905 334 aa15.57■□□□□ 0.08
SS18-201ENST00000269137 ST6GALNAC4Q9H4F1 302 aa15.57■□□□□ 0.08
SS18-201ENST00000269137 CREBZFQ9NS37 354 aa15.57■□□□□ 0.08
SS18-201ENST00000269137 GJD2Q9UKL4 321 aa15.57■□□□□ 0.08
SS18-201ENST00000269137 EMSYQ7Z589 1322 aa15.56■□□□□ 0.08
SS18-201ENST00000269137 SLC26A2P50443 739 aa15.56■□□□□ 0.08
SS18-201ENST00000269137 ACVR2BQ13705 512 aa15.56■□□□□ 0.08
SS18-201ENST00000269137 TARBP2Q15633 366 aaKnown RBP15.56■□□□□ 0.08
SS18-201ENST00000269137 DEFB115Q30KQ5 88 aa15.56■□□□□ 0.08
SS18-201ENST00000269137 CCDC144BQ3MJ40 725 aa15.56■□□□□ 0.08
SS18-201ENST00000269137 TMEM63BQ5T3F8 832 aa15.56■□□□□ 0.08
SS18-201ENST00000269137 IQSEC1Q6DN90 963 aa15.56■□□□□ 0.08
SS18-201ENST00000269137 MAEAQ7L5Y9 396 aa15.56■□□□□ 0.08
SS18-201ENST00000269137 TMC6Q7Z403 805 aa15.56■□□□□ 0.08
SS18-201ENST00000269137 CNOT6LQ96LI5 555 aaKnown RBP15.56■□□□□ 0.08
SS18-201ENST00000269137 ATP6V0A4Q9HBG4 840 aa15.56■□□□□ 0.08
SS18-201ENST00000269137 TYW1Q9NV66 732 aaKnown RBP15.56■□□□□ 0.08
SS18-201ENST00000269137 N4BP3O15049 544 aa15.55■□□□□ 0.08
SS18-201ENST00000269137 GNA14O95837 355 aa15.55■□□□□ 0.08
SS18-201ENST00000269137 RGS2P41220 211 aa15.55■□□□□ 0.08
SS18-201ENST00000269137 GSDMDP57764 484 aa15.55■□□□□ 0.08
SS18-201ENST00000269137 DUSP28Q4G0W2 176 aa15.55■□□□□ 0.08
SS18-201ENST00000269137 FAM102BQ5T8I3 360 aa15.55■□□□□ 0.08
SS18-201ENST00000269137 OLFML2BQ68BL8 750 aa15.55■□□□□ 0.08
SS18-201ENST00000269137 FILIP1Q7Z7B0 1213 aa15.55■□□□□ 0.08
SS18-201ENST00000269137 SPIRE2Q8WWL2 714 aa15.55■□□□□ 0.08
SS18-201ENST00000269137 CAPNS2Q96L46 248 aa15.55■□□□□ 0.08
SS18-201ENST00000269137 CEP89Q96ST8 783 aa15.55■□□□□ 0.08
SS18-201ENST00000269137 DHX33Q9H6R0 707 aaKnown RBP15.55■□□□□ 0.08
SS18-201ENST00000269137 TAB2Q9NYJ8 693 aa15.55■□□□□ 0.08
SS18-201ENST00000269137 TNPO2O14787 897 aaKnown RBP15.54■□□□□ 0.08
SS18-201ENST00000269137 NKRFO15226 690 aaKnown RBP eCLIP15.54■□□□□ 0.08
SS18-201ENST00000269137 TEX33O43247 280 aa15.54■□□□□ 0.08
SS18-201ENST00000269137 CALUO43852 315 aaPredicted RBP15.54■□□□□ 0.08
SS18-201ENST00000269137 IGHA2P01877 340 aa15.54■□□□□ 0.08
SS18-201ENST00000269137 PTGS1P23219 599 aa15.54■□□□□ 0.08
SS18-201ENST00000269137 PBX1P40424 430 aa15.54■□□□□ 0.08
SS18-201ENST00000269137 ADCYAP1R1P41586 468 aa15.54■□□□□ 0.08
SS18-201ENST00000269137 GRM1Q13255 1194 aa15.54■□□□□ 0.08
SS18-201ENST00000269137 NFIL3Q16649 462 aa15.54■□□□□ 0.08
SS18-201ENST00000269137 MTERF2Q49AM1 385 aa15.54■□□□□ 0.08
SS18-201ENST00000269137 PPTC7Q8NI37 304 aa15.54■□□□□ 0.08
SS18-201ENST00000269137 BBXQ8WY36 941 aaPredicted RBP15.54■□□□□ 0.08
SS18-201ENST00000269137 GLG1Q92896 1179 aa15.54■□□□□ 0.08
SS18-201ENST00000269137 NTPCRQ9BSD7 190 aaKnown RBP15.54■□□□□ 0.08
SS18-201ENST00000269137 TUBGCP2Q9BSJ2 902 aa15.54■□□□□ 0.08
SS18-201ENST00000269137 VPS16Q9H269 839 aa15.54■□□□□ 0.08
SS18-201ENST00000269137 SMARCAD1Q9H4L7 1026 aa15.54■□□□□ 0.08
SS18-201ENST00000269137 GPRC5CQ9NQ84 441 aa15.54■□□□□ 0.08
SS18-201ENST00000269137 XPNPEP1Q9NQW7 623 aa15.54■□□□□ 0.08
SS18-201ENST00000269137 KCNG1Q9UIX4 513 aa15.54■□□□□ 0.08
SS18-201ENST00000269137 LGALS16A8MUM7 142 aa15.54■□□□□ 0.08
SS18-201ENST00000269137 RFC5P40937 340 aa15.54■□□□□ 0.08
SS18-201ENST00000269137 APLP1P51693 650 aa15.54■□□□□ 0.08
SS18-201ENST00000269137 NCKAP1LP55160 1127 aa15.54■□□□□ 0.08
SS18-201ENST00000269137 MARSP56192 900 aaKnown RBP15.54■□□□□ 0.08
SS18-201ENST00000269137 GTF2BQ00403 316 aa15.54■□□□□ 0.08
SS18-201ENST00000269137 ZC2HC1CQ53FD0 456 aaPredicted RBP15.54■□□□□ 0.08
SS18-201ENST00000269137 SPECC1LQ69YQ0 1117 aa15.54■□□□□ 0.08
SS18-201ENST00000269137 ATP8B4Q8TF62 1192 aa15.54■□□□□ 0.08
SS18-201ENST00000269137 EEF2KMTQ96G04 330 aa15.54■□□□□ 0.08
SS18-201ENST00000269137 APBA2Q99767 749 aa15.54■□□□□ 0.08
SS18-201ENST00000269137 ESPNB1AK53 854 aa15.53■□□□□ 0.08
SS18-201ENST00000269137 K7ENM7 598 aa15.53■□□□□ 0.08
SS18-201ENST00000269137 CETN3O15182 167 aa15.53■□□□□ 0.08
SS18-201ENST00000269137 TGFB1I1O43294 461 aa15.53■□□□□ 0.08
SS18-201ENST00000269137 TPM2P07951 284 aa15.53■□□□□ 0.08
SS18-201ENST00000269137 RPL13P26373 211 aaKnown RBP15.53■□□□□ 0.08
SS18-201ENST00000269137 MTIF2P46199 727 aaKnown RBP15.53■□□□□ 0.08
SS18-201ENST00000269137 SMTNP53814 917 aa15.53■□□□□ 0.08
SS18-201ENST00000269137 POLGP54098 1239 aaPredicted RBP15.53■□□□□ 0.08
SS18-201ENST00000269137 PEX3P56589 373 aa15.53■□□□□ 0.08
SS18-201ENST00000269137 KCNA1Q09470 495 aa15.53■□□□□ 0.08
SS18-201ENST00000269137 TBX2Q13207 712 aaPredicted RBP15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms