RNA–Protein interactions for RNA: ENST00000267260.4

SRRM4-201, Transcript of serine/arginine repetitive matrix 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRRM4, Length 8,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-201ENST00000267260 RBL2Q08999 1139 aa12.91□□□□□ -0.34
SRRM4-201ENST00000267260 CCDC142Q17RM4 750 aa12.91□□□□□ -0.34
SRRM4-201ENST00000267260 C1orf228Q6PIY5 440 aa12.91□□□□□ -0.34
SRRM4-201ENST00000267260 FANCBQ8NB91 859 aa12.91□□□□□ -0.34
SRRM4-201ENST00000267260 RBM41Q96IZ5 413 aaKnown RBP12.91□□□□□ -0.34
SRRM4-201ENST00000267260 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.91□□□□□ -0.34
SRRM4-201ENST00000267260 SEC24BO95487 1268 aa12.91□□□□□ -0.34
SRRM4-201ENST00000267260 CCND2P30279 289 aa12.91□□□□□ -0.34
SRRM4-201ENST00000267260 KLC1Q07866 573 aa12.91□□□□□ -0.34
SRRM4-201ENST00000267260 KCNA1Q09470 495 aa12.91□□□□□ -0.34
SRRM4-201ENST00000267260 APLFQ8IW19 511 aaPredicted RBP12.91□□□□□ -0.34
SRRM4-201ENST00000267260 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.91□□□□□ -0.34
SRRM4-201ENST00000267260 PPHLN1Q8NEY8 458 aaKnown RBP12.91□□□□□ -0.34
SRRM4-201ENST00000267260 POLR3EQ9NVU0 708 aa12.91□□□□□ -0.34
SRRM4-201ENST00000267260 FRMPD2Q68DX3 1309 aaPredicted RBP12.91□□□□□ -0.34
SRRM4-201ENST00000267260 RASSF3Q86WH2 238 aa12.91□□□□□ -0.34
SRRM4-201ENST00000267260 KIRREL3Q8IZU9 778 aa12.91□□□□□ -0.34
SRRM4-201ENST00000267260 KCNV2Q8TDN2 545 aa12.91□□□□□ -0.34
SRRM4-201ENST00000267260 SLC26A7Q8TE54 656 aa12.91□□□□□ -0.34
SRRM4-201ENST00000267260 GJA10Q969M2 543 aa12.91□□□□□ -0.34
SRRM4-201ENST00000267260 C8orf37Q96NL8 207 aa12.91□□□□□ -0.34
SRRM4-201ENST00000267260 UTP6Q9NYH9 597 aaKnown RBP12.91□□□□□ -0.34
SRRM4-201ENST00000267260 HACD3Q9P035 362 aa12.91□□□□□ -0.34
SRRM4-201ENST00000267260 PLAAQ9Y263 795 aa12.91□□□□□ -0.34
SRRM4-201ENST00000267260 CTSWP56202 376 aa12.9□□□□□ -0.34
SRRM4-201ENST00000267260 PI4K2BQ8TCG2 481 aa12.9□□□□□ -0.34
SRRM4-201ENST00000267260 ZSWIM6Q9HCJ5 1215 aa12.9□□□□□ -0.34
SRRM4-201ENST00000267260 INSRP06213 1382 aa12.9□□□□□ -0.34
SRRM4-201ENST00000267260 TOMM70O94826 608 aa12.9□□□□□ -0.34
SRRM4-201ENST00000267260 ACSL3O95573 720 aa12.9□□□□□ -0.34
SRRM4-201ENST00000267260 PSMA3P25788 255 aa12.9□□□□□ -0.34
SRRM4-201ENST00000267260 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.9□□□□□ -0.34
SRRM4-201ENST00000267260 LSG1Q9H089 658 aaKnown RBP12.9□□□□□ -0.34
SRRM4-201ENST00000267260 LAMC1P11047 1609 aa12.9□□□□□ -0.34
SRRM4-201ENST00000267260 GMNCA6NCL1 334 aa12.9□□□□□ -0.34
SRRM4-201ENST00000267260 KIAA1755Q5JYT7 1200 aa12.9□□□□□ -0.34
SRRM4-201ENST00000267260 TBC1D9BQ66K14 1250 aa12.9□□□□□ -0.34
SRRM4-201ENST00000267260 PBXIP1Q96AQ6 731 aa12.9□□□□□ -0.34
SRRM4-201ENST00000267260 FAF2Q96CS3 445 aa12.9□□□□□ -0.34
SRRM4-201ENST00000267260 ZNF577Q9BSK1 485 aa12.9□□□□□ -0.34
SRRM4-201ENST00000267260 ZMYND8Q9ULU4 1186 aaPredicted RBP12.9□□□□□ -0.34
SRRM4-201ENST00000267260 TNNQ9UQP3 1299 aa12.9□□□□□ -0.34
SRRM4-201ENST00000267260 DYNLT1P63172 113 aa12.9□□□□□ -0.34
SRRM4-201ENST00000267260 WASHC5Q12768 1159 aa12.9□□□□□ -0.34
SRRM4-201ENST00000267260 HINFPQ9BQA5 517 aa12.9□□□□□ -0.34
SRRM4-201ENST00000267260 PARVGQ9HBI0 331 aa12.9□□□□□ -0.34
SRRM4-201ENST00000267260 ANGPT1Q15389 498 aa12.9□□□□□ -0.34
SRRM4-201ENST00000267260 TRADDQ15628 312 aa12.9□□□□□ -0.34
SRRM4-201ENST00000267260 RRM2BQ7LG56 351 aa12.9□□□□□ -0.34
SRRM4-201ENST00000267260 CCDC103Q8IW40 242 aa12.9□□□□□ -0.34
SRRM4-201ENST00000267260 MAPKAPK5Q8IW41 473 aa12.9□□□□□ -0.34
SRRM4-201ENST00000267260 NDEL1Q9GZM8 345 aa12.9□□□□□ -0.34
SRRM4-201ENST00000267260 FOXD4Q12950 439 aaPredicted RBP12.9□□□□□ -0.35
SRRM4-201ENST00000267260 KRT72Q14CN4 511 aa12.9□□□□□ -0.35
SRRM4-201ENST00000267260 RFWD2Q8NHY2 731 aa12.9□□□□□ -0.35
SRRM4-201ENST00000267260 FAM161BQ96MY7 647 aa12.9□□□□□ -0.35
SRRM4-201ENST00000267260 G3BP2Q9UN86 482 aaKnown RBP12.9□□□□□ -0.35
SRRM4-201ENST00000267260 PRDM1O75626 825 aa12.89□□□□□ -0.35
SRRM4-201ENST00000267260 CXCR5P32302 372 aa12.89□□□□□ -0.35
SRRM4-201ENST00000267260 FAM149B1Q96BN6 582 aa12.89□□□□□ -0.35
SRRM4-201ENST00000267260 DBNDD2Q9BQY9 259 aa12.89□□□□□ -0.35
SRRM4-201ENST00000267260 NSMCE4AQ9NXX6 385 aa12.89□□□□□ -0.35
SRRM4-201ENST00000267260 ARHGEF10O15013 1369 aa12.89□□□□□ -0.35
SRRM4-201ENST00000267260 IMPDH2P12268 514 aa12.89□□□□□ -0.35
SRRM4-201ENST00000267260 KIAA1841Q6NSI8 718 aa12.89□□□□□ -0.35
SRRM4-201ENST00000267260 ZSCAN20P17040 1043 aaPredicted RBP12.89□□□□□ -0.35
SRRM4-201ENST00000267260 ASZ1Q8WWH4 475 aa12.89□□□□□ -0.35
SRRM4-201ENST00000267260 IP6K1Q92551 441 aa12.89□□□□□ -0.35
SRRM4-201ENST00000267260 TTC17Q96AE7 1141 aa12.89□□□□□ -0.35
SRRM4-201ENST00000267260 HAUS5O94927 633 aa12.89□□□□□ -0.35
SRRM4-201ENST00000267260 MYH3P11055 1940 aa12.89□□□□□ -0.35
SRRM4-201ENST00000267260 INPP5AQ14642 412 aa12.89□□□□□ -0.35
SRRM4-201ENST00000267260 AARS2Q5JTZ9 985 aaKnown RBP12.89□□□□□ -0.35
SRRM4-201ENST00000267260 SERPINB4P48594 390 aa12.89□□□□□ -0.35
SRRM4-201ENST00000267260 MKRN3Q13064 507 aaKnown RBP12.89□□□□□ -0.35
SRRM4-201ENST00000267260 RNF219Q5W0B1 726 aaPredicted RBP12.89□□□□□ -0.35
SRRM4-201ENST00000267260 EFHBQ8N7U6 833 aa12.89□□□□□ -0.35
SRRM4-201ENST00000267260 TNIP2Q8NFZ5 429 aa12.89□□□□□ -0.35
SRRM4-201ENST00000267260 TEKT4Q8WW24 435 aa12.89□□□□□ -0.35
SRRM4-201ENST00000267260 SIKE1Q9BRV8 207 aa12.89□□□□□ -0.35
SRRM4-201ENST00000267260 C19orf44Q9H6X5 657 aa12.89□□□□□ -0.35
SRRM4-201ENST00000267260 UBE2TQ9NPD8 197 aaPredicted RBP12.89□□□□□ -0.35
SRRM4-201ENST00000267260 PCDHA7Q9UN72 937 aa12.89□□□□□ -0.35
SRRM4-201ENST00000267260 PCDHA4Q9UN74 947 aa12.89□□□□□ -0.35
SRRM4-201ENST00000267260 POLA2Q14181 598 aa12.89□□□□□ -0.35
SRRM4-201ENST00000267260 RNF26Q9BY78 433 aaPredicted RBP12.89□□□□□ -0.35
SRRM4-201ENST00000267260 MAP3K15Q6ZN16 1313 aa12.89□□□□□ -0.35
SRRM4-201ENST00000267260 POLR1AO95602 1720 aaPredicted RBP12.89□□□□□ -0.35
SRRM4-201ENST00000267260 ASAP2O43150 1006 aa12.89□□□□□ -0.35
SRRM4-201ENST00000267260 NDUFA10O95299 355 aa12.89□□□□□ -0.35
SRRM4-201ENST00000267260 MFSD14BQ5SR56 506 aa12.89□□□□□ -0.35
SRRM4-201ENST00000267260 RAB42Q8N4Z0 105 aa12.89□□□□□ -0.35
SRRM4-201ENST00000267260 GOLPH3LQ9H4A5 285 aa12.89□□□□□ -0.35
SRRM4-201ENST00000267260 SYNMO15061 1565 aa12.89□□□□□ -0.35
SRRM4-201ENST00000267260 A2MP01023 1474 aa12.88□□□□□ -0.35
SRRM4-201ENST00000267260 SLFN12LQ6IEE8 588 aa12.88□□□□□ -0.35
SRRM4-201ENST00000267260 TADA1Q96BN2 335 aa12.88□□□□□ -0.35
SRRM4-201ENST00000267260 TRIM54Q9BYV2 358 aa12.88□□□□□ -0.35
SRRM4-201ENST00000267260 UBE4BO95155 1302 aa12.88□□□□□ -0.35
SRRM4-201ENST00000267260 KIF20BQ96Q89 1820 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms