RNA–Protein interactions for RNA: ENST00000266679.8

CPSF6-201, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 1 (best) BASIC

Gene CPSF6, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-201ENST00000266679 DLK2Q6UY11 383 aa14.13□□□□□ -0.15
CPSF6-201ENST00000266679 KSR1Q8IVT5 923 aa14.13□□□□□ -0.15
CPSF6-201ENST00000266679 CHURC1Q8WUH1 139 aa14.13□□□□□ -0.15
CPSF6-201ENST00000266679 MS4A14Q96JA4 679 aa14.13□□□□□ -0.15
CPSF6-201ENST00000266679 GLIS2Q9BZE0 524 aaPredicted RBP14.13□□□□□ -0.15
CPSF6-201ENST00000266679 UNC45AQ9H3U1 944 aa14.13□□□□□ -0.15
CPSF6-201ENST00000266679 VCPKMTQ9H867 229 aa14.13□□□□□ -0.15
CPSF6-201ENST00000266679 EHMT1Q9H9B1 1298 aa14.13□□□□□ -0.15
CPSF6-201ENST00000266679 AJAP1Q9UKB5 411 aaPredicted RBP14.13□□□□□ -0.15
CPSF6-201ENST00000266679 ADAM21Q9UKJ8 722 aa14.13□□□□□ -0.15
CPSF6-201ENST00000266679 HPCAL4Q9UM19 191 aa14.13□□□□□ -0.15
CPSF6-201ENST00000266679 MRPL11Q9Y3B7 192 aaKnown RBP14.13□□□□□ -0.15
CPSF6-201ENST00000266679 PCDHB13Q9Y5F0 798 aa14.13□□□□□ -0.15
CPSF6-201ENST00000266679 A0A0U1RQG5 324 aaPredicted RBP14.12□□□□□ -0.15
CPSF6-201ENST00000266679 PHACTR2O75167 634 aa14.12□□□□□ -0.15
CPSF6-201ENST00000266679 HSPA1AP0DMV8 641 aaKnown RBP14.12□□□□□ -0.15
CPSF6-201ENST00000266679 HSPA1BP0DMV9 641 aaKnown RBP14.12□□□□□ -0.15
CPSF6-201ENST00000266679 ARP10275 920 aa14.12□□□□□ -0.15
CPSF6-201ENST00000266679 UCHL3P15374 230 aa14.12□□□□□ -0.15
CPSF6-201ENST00000266679 PAFAH1B1P43034 410 aa14.12□□□□□ -0.15
CPSF6-201ENST00000266679 TNIP1Q15025 636 aa14.12□□□□□ -0.15
CPSF6-201ENST00000266679 KIAA0753Q2KHM9 967 aa14.12□□□□□ -0.15
CPSF6-201ENST00000266679 ZC2HC1CQ53FD0 456 aaPredicted RBP14.12□□□□□ -0.15
CPSF6-201ENST00000266679 CCNI2Q6ZMN8 369 aaPredicted RBP14.12□□□□□ -0.15
CPSF6-201ENST00000266679 C1orf186Q6ZWK4 172 aa14.12□□□□□ -0.15
CPSF6-201ENST00000266679 USP50Q70EL3 339 aaPredicted RBP14.12□□□□□ -0.15
CPSF6-201ENST00000266679 MICALL2Q8IY33 904 aa14.12□□□□□ -0.15
CPSF6-201ENST00000266679 FAM71BQ8TC56 605 aa14.12□□□□□ -0.15
CPSF6-201ENST00000266679 HDAC7Q8WUI4 952 aa14.12□□□□□ -0.15
CPSF6-201ENST00000266679 SELENOOQ9BVL4 669 aa14.12□□□□□ -0.15
CPSF6-201ENST00000266679 PLCB1Q9NQ66 1216 aa14.12□□□□□ -0.15
CPSF6-201ENST00000266679 CCDC66A2RUB6 948 aa14.11□□□□□ -0.15
CPSF6-201ENST00000266679 TGFB1I1O43294 461 aa14.11□□□□□ -0.15
CPSF6-201ENST00000266679 LMAN1P49257 510 aa14.11□□□□□ -0.15
CPSF6-201ENST00000266679 SLC7A5Q01650 507 aa14.11□□□□□ -0.15
CPSF6-201ENST00000266679 PTK2Q05397 1052 aa14.11□□□□□ -0.15
CPSF6-201ENST00000266679 GBP6Q6ZN66 633 aa14.11□□□□□ -0.15
CPSF6-201ENST00000266679 SAMD7Q7Z3H4 446 aa14.11□□□□□ -0.15
CPSF6-201ENST00000266679 ZNF571Q7Z3V5 609 aaPredicted RBP14.11□□□□□ -0.15
CPSF6-201ENST00000266679 DNAAF5Q86Y56 855 aa14.11□□□□□ -0.15
CPSF6-201ENST00000266679 GMLQ99445 158 aa14.11□□□□□ -0.15
CPSF6-201ENST00000266679 ZNF577Q9BSK1 485 aa14.11□□□□□ -0.15
CPSF6-201ENST00000266679 METTL14Q9HCE5 456 aaKnown RBP14.11□□□□□ -0.15
CPSF6-201ENST00000266679 OLFML3Q9NRN5 406 aa14.11□□□□□ -0.15
CPSF6-201ENST00000266679 GCNT4Q9P109 453 aa14.11□□□□□ -0.15
CPSF6-201ENST00000266679 WRAP73Q9P2S5 460 aaPredicted RBP14.11□□□□□ -0.15
CPSF6-201ENST00000266679 CNOT7Q9UIV1 285 aaKnown RBP14.11□□□□□ -0.15
CPSF6-201ENST00000266679 TSKSQ9UJT2 592 aa14.11□□□□□ -0.15
CPSF6-201ENST00000266679 LOXHD1Q8IVV2 1947 aa14.11□□□□□ -0.15
CPSF6-201ENST00000266679 FRMPD4Q14CM0 1322 aa14.11□□□□□ -0.15
CPSF6-201ENST00000266679 DDX39AO00148 427 aaKnown RBP14.11□□□□□ -0.15
CPSF6-201ENST00000266679 VIL1P09327 827 aaKnown RBP14.11□□□□□ -0.15
CPSF6-201ENST00000266679 COG2Q14746 738 aa14.11□□□□□ -0.15
CPSF6-201ENST00000266679 CEP55Q53EZ4 464 aa14.11□□□□□ -0.15
CPSF6-201ENST00000266679 COL13A1Q5TAT6 717 aaPredicted RBP14.11□□□□□ -0.15
CPSF6-201ENST00000266679 GJB7Q6PEY0 223 aa14.11□□□□□ -0.15
CPSF6-201ENST00000266679 IRF2BP2Q7Z5L9 587 aa14.11□□□□□ -0.15
CPSF6-201ENST00000266679 OGFOD1Q8N543 542 aa14.11□□□□□ -0.15
CPSF6-201ENST00000266679 SLC35C1Q96A29 364 aa14.11□□□□□ -0.15
CPSF6-201ENST00000266679 EXOC4Q96A65 974 aa14.11□□□□□ -0.15
CPSF6-201ENST00000266679 VIPAS39Q9H9C1 493 aa14.11□□□□□ -0.15
CPSF6-201ENST00000266679 SIX2Q9NPC8 291 aa14.11□□□□□ -0.15
CPSF6-201ENST00000266679 PKD2L1Q9P0L9 805 aa14.11□□□□□ -0.15
CPSF6-201ENST00000266679 DMGDHQ9UI17 866 aaKnown RBP14.11□□□□□ -0.15
CPSF6-201ENST00000266679 PACSIN2Q9UNF0 486 aaPredicted RBP14.11□□□□□ -0.15
CPSF6-201ENST00000266679 EIF3DO15371 548 aaKnown RBP eCLIP14.1□□□□□ -0.15
CPSF6-201ENST00000266679 VEGFBP49765 207 aa14.1□□□□□ -0.15
CPSF6-201ENST00000266679 ITIH3Q06033 890 aa14.1□□□□□ -0.15
CPSF6-201ENST00000266679 TBC1D10BQ4KMP7 808 aaPredicted RBP14.1□□□□□ -0.15
CPSF6-201ENST00000266679 FAM160B2Q86V87 743 aa14.1□□□□□ -0.15
CPSF6-201ENST00000266679 FAM186BQ8IYM0 893 aa14.1□□□□□ -0.15
CPSF6-201ENST00000266679 TEKT3Q9BXF9 490 aa14.1□□□□□ -0.15
CPSF6-201ENST00000266679 PARVGQ9HBI0 331 aa14.1□□□□□ -0.15
CPSF6-201ENST00000266679 RBM12Q9NTZ6 932 aaKnown RBP14.1□□□□□ -0.15
CPSF6-201ENST00000266679 ABT1Q9ULW3 272 aaKnown RBP14.1□□□□□ -0.15
CPSF6-201ENST00000266679 GRID2IPA4D2P6 1211 aa14.1□□□□□ -0.15
CPSF6-201ENST00000266679 GRM1Q13255 1194 aa14.1□□□□□ -0.15
CPSF6-201ENST00000266679 BANK1Q8NDB2 785 aa14.1□□□□□ -0.15
CPSF6-201ENST00000266679 MED4Q9NPJ6 270 aa14.1□□□□□ -0.15
CPSF6-201ENST00000266679 FEM1BQ9UK73 627 aa14.1□□□□□ -0.15
CPSF6-201ENST00000266679 AARSP49588 968 aaKnown RBP eCLIP14.09□□□□□ -0.15
CPSF6-201ENST00000266679 CYP2J2P51589 502 aa14.09□□□□□ -0.15
CPSF6-201ENST00000266679 CFAP221Q4G0U5 840 aa14.09□□□□□ -0.15
CPSF6-201ENST00000266679 MEI1Q5TIA1 1274 aa14.09□□□□□ -0.15
CPSF6-201ENST00000266679 C8orf74Q6P047 294 aa14.09□□□□□ -0.15
CPSF6-201ENST00000266679 KCTD17Q8N5Z5 321 aa14.09□□□□□ -0.15
CPSF6-201ENST00000266679 AENQ8WTP8 325 aaKnown RBP14.09□□□□□ -0.15
CPSF6-201ENST00000266679 AGBL1Q96MI9 1066 aa14.09□□□□□ -0.15
CPSF6-201ENST00000266679 LXNQ9BS40 222 aa14.09□□□□□ -0.15
CPSF6-201ENST00000266679 WDR11Q9BZH6 1224 aa14.09□□□□□ -0.15
CPSF6-201ENST00000266679 SCAF8Q9UPN6 1271 aaKnown RBP14.09□□□□□ -0.15
CPSF6-201ENST00000266679 PCDHGC5Q9Y5F6 944 aa14.09□□□□□ -0.15
CPSF6-201ENST00000266679 CAP2P40123 477 aa14.09□□□□□ -0.15
CPSF6-201ENST00000266679 SETQ01105 290 aaPredicted RBP14.09□□□□□ -0.15
CPSF6-201ENST00000266679 CST9Q5W186 159 aa14.09□□□□□ -0.15
CPSF6-201ENST00000266679 SND1Q7KZF4 910 aaKnown RBP eCLIP14.09□□□□□ -0.15
CPSF6-201ENST00000266679 FAM178BQ8IXR5 827 aa14.09□□□□□ -0.15
CPSF6-201ENST00000266679 NACC1Q96RE7 527 aa14.09□□□□□ -0.15
CPSF6-201ENST00000266679 ZNF408Q9H9D4 720 aa14.09□□□□□ -0.15
CPSF6-201ENST00000266679 CCPG1Q9ULG6 757 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms