RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 GH1P01241 217 aa9.5□□□□□ -0.89
VAPB-201ENST00000265619 CYP7A1P22680 504 aa9.5□□□□□ -0.89
VAPB-201ENST00000265619 CACNA2D1P54289 1103 aa9.5□□□□□ -0.89
VAPB-201ENST00000265619 EN1Q05925 392 aaPredicted RBP9.5□□□□□ -0.89
VAPB-201ENST00000265619 DEUP1Q05D60 604 aa9.5□□□□□ -0.89
VAPB-201ENST00000265619 RCN2Q14257 317 aa9.5□□□□□ -0.89
VAPB-201ENST00000265619 HGSNATQ68CP4 663 aa9.5□□□□□ -0.89
VAPB-201ENST00000265619 OTUD6AQ7L8S5 288 aa9.5□□□□□ -0.89
VAPB-201ENST00000265619 ATP8B4Q8TF62 1192 aa9.5□□□□□ -0.89
VAPB-201ENST00000265619 NUDCD1Q96RS6 583 aa9.5□□□□□ -0.89
VAPB-201ENST00000265619 ATP8A2Q9NTI2 1148 aa9.5□□□□□ -0.89
VAPB-201ENST00000265619 CYP39A1Q9NYL5 469 aa9.5□□□□□ -0.89
VAPB-201ENST00000265619 ZSWIM5Q9P217 1185 aa9.5□□□□□ -0.89
VAPB-201ENST00000265619 ANAPC4Q9UJX5 808 aa9.5□□□□□ -0.89
VAPB-201ENST00000265619 USP20Q9Y2K6 914 aa9.5□□□□□ -0.89
VAPB-201ENST00000265619 SUGT1Q9Y2Z0 365 aa9.5□□□□□ -0.89
VAPB-201ENST00000265619 SMIM22K7EJ46 135 aa9.5□□□□□ -0.89
VAPB-201ENST00000265619 PJA2O43164 708 aa9.5□□□□□ -0.89
VAPB-201ENST00000265619 GTPBP6O43824 516 aaPredicted RBP9.5□□□□□ -0.89
VAPB-201ENST00000265619 UBTFL6P0CB48 400 aaPredicted RBP9.5□□□□□ -0.89
VAPB-201ENST00000265619 MFSD4BQ5TF39 518 aa9.5□□□□□ -0.89
VAPB-201ENST00000265619 DUS1LQ6P1R4 473 aaKnown RBP9.5□□□□□ -0.89
VAPB-201ENST00000265619 RFWD3Q6PCD5 774 aa9.5□□□□□ -0.89
VAPB-201ENST00000265619 LRRC45Q96CN5 670 aa9.5□□□□□ -0.89
VAPB-201ENST00000265619 NOC4LQ9BVI4 516 aaKnown RBP9.5□□□□□ -0.89
VAPB-201ENST00000265619 CCDC113Q9H0I3 377 aa9.5□□□□□ -0.89
VAPB-201ENST00000265619 BZW2Q9Y6E2 419 aaKnown RBP9.5□□□□□ -0.89
VAPB-201ENST00000265619 NUP98P52948 1817 aa9.5□□□□□ -0.89
VAPB-201ENST00000265619 KLRC4O43908 158 aa9.5□□□□□ -0.89
VAPB-201ENST00000265619 TLR2O60603 784 aa9.5□□□□□ -0.89
VAPB-201ENST00000265619 ATP9AO75110 1047 aa9.5□□□□□ -0.89
VAPB-201ENST00000265619 CAPN15O75808 1086 aa9.5□□□□□ -0.89
VAPB-201ENST00000265619 AFPP02771 609 aaKnown RBP9.5□□□□□ -0.89
VAPB-201ENST00000265619 SERPINB2P05120 415 aa9.5□□□□□ -0.89
VAPB-201ENST00000265619 ZCCHC18P0CG32 403 aa9.5□□□□□ -0.89
VAPB-201ENST00000265619 PDE6AP16499 860 aa9.5□□□□□ -0.89
VAPB-201ENST00000265619 TARSP26639 723 aaKnown RBP9.5□□□□□ -0.89
VAPB-201ENST00000265619 P3H1Q32P28 736 aa9.5□□□□□ -0.89
VAPB-201ENST00000265619 EXOC3L1Q86VI1 746 aa9.5□□□□□ -0.89
VAPB-201ENST00000265619 TXNRD3Q86VQ6 643 aa9.5□□□□□ -0.89
VAPB-201ENST00000265619 CSGALNACT2Q8N6G5 542 aa9.5□□□□□ -0.89
VAPB-201ENST00000265619 SCFD2Q8WU76 684 aa9.5□□□□□ -0.89
VAPB-201ENST00000265619 ZNF333Q96JL9 665 aa9.5□□□□□ -0.89
VAPB-201ENST00000265619 MMRN2Q9H8L6 949 aa9.5□□□□□ -0.89
VAPB-201ENST00000265619 NLRC4Q9NPP4 1024 aa9.5□□□□□ -0.89
VAPB-201ENST00000265619 ATXN10Q9UBB4 475 aa9.5□□□□□ -0.89
VAPB-201ENST00000265619 SIK3Q9Y2K2 1263 aa9.5□□□□□ -0.89
VAPB-201ENST00000265619 USH1CQ9Y6N9 552 aa9.5□□□□□ -0.89
VAPB-201ENST00000265619 CEP104O60308 925 aa9.49□□□□□ -0.89
VAPB-201ENST00000265619 EEF1GP26641 437 aaKnown RBP9.49□□□□□ -0.89
VAPB-201ENST00000265619 EPHB2P29323 1055 aa9.49□□□□□ -0.89
VAPB-201ENST00000265619 MTIF2P46199 727 aaKnown RBP9.49□□□□□ -0.89
VAPB-201ENST00000265619 SEPT2Q15019 361 aa9.49□□□□□ -0.89
VAPB-201ENST00000265619 CNGA2Q16280 664 aa9.49□□□□□ -0.89
VAPB-201ENST00000265619 NAALADL2Q58DX5 795 aa9.49□□□□□ -0.89
VAPB-201ENST00000265619 KBTBD2Q8IY47 623 aa9.49□□□□□ -0.89
VAPB-201ENST00000265619 GDAP1Q8TB36 358 aa9.49□□□□□ -0.89
VAPB-201ENST00000265619 PIGOQ8TEQ8 1089 aa9.49□□□□□ -0.89
VAPB-201ENST00000265619 BAP1Q92560 729 aa9.49□□□□□ -0.89
VAPB-201ENST00000265619 TXLNGYQ9BZA5 131 aa9.49□□□□□ -0.89
VAPB-201ENST00000265619 CNOT10Q9H9A5 744 aaKnown RBP9.49□□□□□ -0.89
VAPB-201ENST00000265619 HAO1Q9UJM8 370 aa9.49□□□□□ -0.89
VAPB-201ENST00000265619 MINPP1Q9UNW1 487 aa9.49□□□□□ -0.89
VAPB-201ENST00000265619 MROH5Q6ZUA9 1318 aa9.49□□□□□ -0.89
VAPB-201ENST00000265619 GFPT2O94808 682 aa9.49□□□□□ -0.89
VAPB-201ENST00000265619 FAM200BP0CF97 657 aa9.49□□□□□ -0.89
VAPB-201ENST00000265619 SETSIPP0DME0 302 aa9.49□□□□□ -0.89
VAPB-201ENST00000265619 FCER1AP12319 257 aa9.49□□□□□ -0.89
VAPB-201ENST00000265619 VEGFAP15692 232 aaPredicted RBP9.49□□□□□ -0.89
VAPB-201ENST00000265619 ACADSP16219 412 aa9.49□□□□□ -0.89
VAPB-201ENST00000265619 IFNAR1P17181 557 aa9.49□□□□□ -0.89
VAPB-201ENST00000265619 CDK17Q00537 523 aa9.49□□□□□ -0.89
VAPB-201ENST00000265619 DIXDC1Q155Q3 683 aa9.49□□□□□ -0.89
VAPB-201ENST00000265619 DPY19L2Q6NUT2 758 aa9.49□□□□□ -0.89
VAPB-201ENST00000265619 ADAT2Q7Z6V5 191 aaKnown RBP9.49□□□□□ -0.89
VAPB-201ENST00000265619 ECHDC2Q86YB7 292 aa9.49□□□□□ -0.89
VAPB-201ENST00000265619 NYXQ9GZU5 481 aa9.49□□□□□ -0.89
VAPB-201ENST00000265619 NAPBQ9H115 298 aa9.49□□□□□ -0.89
VAPB-201ENST00000265619 DENND2DQ9H6A0 471 aaPredicted RBP9.49□□□□□ -0.89
VAPB-201ENST00000265619 SLC12A7Q9Y666 1083 aa9.49□□□□□ -0.89
VAPB-201ENST00000265619 UBR2Q8IWV8 1755 aa9.49□□□□□ -0.89
VAPB-201ENST00000265619 RIC1Q4ADV7 1423 aa9.49□□□□□ -0.89
VAPB-201ENST00000265619 CYP2D7A0A087X1C5 515 aa9.49□□□□□ -0.89
VAPB-201ENST00000265619 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.49□□□□□ -0.89
VAPB-201ENST00000265619 ZBTB48P10074 688 aaPredicted RBP9.49□□□□□ -0.89
VAPB-201ENST00000265619 KCNA3P22001 575 aa9.49□□□□□ -0.89
VAPB-201ENST00000265619 PSMC4P43686 418 aa9.49□□□□□ -0.89
VAPB-201ENST00000265619 ZNF131P52739 623 aa9.49□□□□□ -0.89
VAPB-201ENST00000265619 SFMBT2Q5VUG0 894 aa9.49□□□□□ -0.89
VAPB-201ENST00000265619 SEPT14Q6ZU15 432 aa9.49□□□□□ -0.89
VAPB-201ENST00000265619 DEFB132Q7Z7B7 95 aa9.49□□□□□ -0.89
VAPB-201ENST00000265619 TBC1D16Q8TBP0 767 aa9.49□□□□□ -0.89
VAPB-201ENST00000265619 FBF1Q8TES7 1133 aa9.49□□□□□ -0.89
VAPB-201ENST00000265619 DNAJC1Q96KC8 554 aaKnown RBP9.49□□□□□ -0.89
VAPB-201ENST00000265619 KRT23Q9C075 422 aa9.49□□□□□ -0.89
VAPB-201ENST00000265619 WNK3Q9BYP7 1800 aa9.49□□□□□ -0.89
VAPB-201ENST00000265619 MAGEB3O15480 346 aa9.48□□□□□ -0.89
VAPB-201ENST00000265619 TPD52L2O43399 206 aaKnown RBP9.48□□□□□ -0.89
VAPB-201ENST00000265619 CCNB1P14635 433 aa9.48□□□□□ -0.89
VAPB-201ENST00000265619 HNRNPH3P31942 346 aaKnown RBP9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms