RNA–Protein interactions for RNA: ENST00000265038.9

ERCC8-201, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC8, Length 2,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-201ENST00000265038 SLC9A7Q96T83 725 aa9.43□□□□□ -0.9
ERCC8-201ENST00000265038 TTYH1Q9H313 450 aaPredicted RBP9.43□□□□□ -0.9
ERCC8-201ENST00000265038 GINS2Q9Y248 185 aa9.43□□□□□ -0.9
ERCC8-201ENST00000265038 EFCAB14O75071 495 aa9.43□□□□□ -0.9
ERCC8-201ENST00000265038 TMOD1P28289 359 aa9.43□□□□□ -0.9
ERCC8-201ENST00000265038 PRPHP41219 470 aa9.43□□□□□ -0.9
ERCC8-201ENST00000265038 KCNJ6P48051 423 aa9.43□□□□□ -0.9
ERCC8-201ENST00000265038 CRYBB1P53674 252 aaPredicted RBP9.43□□□□□ -0.9
ERCC8-201ENST00000265038 ATP2C1P98194 919 aaPredicted RBP9.43□□□□□ -0.9
ERCC8-201ENST00000265038 RESTQ13127 1097 aa9.43□□□□□ -0.9
ERCC8-201ENST00000265038 OTUD6AQ7L8S5 288 aa9.43□□□□□ -0.9
ERCC8-201ENST00000265038 BRAPQ7Z569 592 aa9.43□□□□□ -0.9
ERCC8-201ENST00000265038 RTN4RL1Q86UN2 441 aaPredicted RBP9.43□□□□□ -0.9
ERCC8-201ENST00000265038 HERC6Q8IVU3 1022 aa9.43□□□□□ -0.9
ERCC8-201ENST00000265038 DEFB123Q8N688 67 aa9.43□□□□□ -0.9
ERCC8-201ENST00000265038 IGSF22Q8N9C0 903 aa9.43□□□□□ -0.9
ERCC8-201ENST00000265038 USP38Q8NB14 1042 aa9.43□□□□□ -0.9
ERCC8-201ENST00000265038 TIFAQ96CG3 184 aa9.43□□□□□ -0.9
ERCC8-201ENST00000265038 ZNF668Q96K58 619 aaPredicted RBP9.43□□□□□ -0.9
ERCC8-201ENST00000265038 POLR3CQ9BUI4 534 aaPredicted RBP9.43□□□□□ -0.9
ERCC8-201ENST00000265038 NKX2-4Q9H2Z4 354 aa9.43□□□□□ -0.9
ERCC8-201ENST00000265038 SEMA6BQ9H3T3 888 aa9.43□□□□□ -0.9
ERCC8-201ENST00000265038 DHX33Q9H6R0 707 aaKnown RBP9.43□□□□□ -0.9
ERCC8-201ENST00000265038 TUFT1Q9NNX1 390 aa9.43□□□□□ -0.9
ERCC8-201ENST00000265038 PADI3Q9ULW8 664 aa9.43□□□□□ -0.9
ERCC8-201ENST00000265038 MTMR6Q9Y217 621 aa9.43□□□□□ -0.9
ERCC8-201ENST00000265038 AKT3Q9Y243 479 aa9.43□□□□□ -0.9
ERCC8-201ENST00000265038 NOC2LQ9Y3T9 749 aaKnown RBP9.43□□□□□ -0.9
ERCC8-201ENST00000265038 LAD1O00515 517 aa9.42□□□□□ -0.9
ERCC8-201ENST00000265038 ENPP3O14638 875 aa9.42□□□□□ -0.9
ERCC8-201ENST00000265038 NLRP11P59045 1033 aaKnown RBP9.42□□□□□ -0.9
ERCC8-201ENST00000265038 PDIA5Q14554 519 aa9.42□□□□□ -0.9
ERCC8-201ENST00000265038 RAB30Q15771 203 aa9.42□□□□□ -0.9
ERCC8-201ENST00000265038 ECM1Q16610 540 aa9.42□□□□□ -0.9
ERCC8-201ENST00000265038 TMEM266Q2M3C6 531 aa9.42□□□□□ -0.9
ERCC8-201ENST00000265038 XKR9Q5GH70 373 aa9.42□□□□□ -0.9
ERCC8-201ENST00000265038 PIGOQ8TEQ8 1089 aa9.42□□□□□ -0.9
ERCC8-201ENST00000265038 MAP7D2Q96T17 732 aa9.42□□□□□ -0.9
ERCC8-201ENST00000265038 OSMRQ99650 979 aa9.42□□□□□ -0.9
ERCC8-201ENST00000265038 TMX1Q9H3N1 280 aa9.42□□□□□ -0.9
ERCC8-201ENST00000265038 ANKEF1Q9NU02 776 aa9.42□□□□□ -0.9
ERCC8-201ENST00000265038 MTMR10Q9NXD2 777 aa9.42□□□□□ -0.9
ERCC8-201ENST00000265038 SUCLA2Q9P2R7 463 aaPredicted RBP9.42□□□□□ -0.9
ERCC8-201ENST00000265038 MSRAQ9UJ68 235 aa9.42□□□□□ -0.9
ERCC8-201ENST00000265038 PPME1Q9Y570 386 aa9.42□□□□□ -0.9
ERCC8-201ENST00000265038 PCDHA11Q9Y5I1 949 aa9.42□□□□□ -0.9
ERCC8-201ENST00000265038 LAMA3Q16787 3333 aa9.42□□□□□ -0.9
ERCC8-201ENST00000265038 STX6O43752 255 aa9.41□□□□□ -0.9
ERCC8-201ENST00000265038 XRCC6P12956 609 aaKnown RBP eCLIP9.41□□□□□ -0.9
ERCC8-201ENST00000265038 RPA1P27694 616 aa9.41□□□□□ -0.9
ERCC8-201ENST00000265038 RFC5P40937 340 aa9.41□□□□□ -0.9
ERCC8-201ENST00000265038 GPC3P51654 580 aa9.41□□□□□ -0.9
ERCC8-201ENST00000265038 ZNF697Q5TEC3 545 aa9.41□□□□□ -0.9
ERCC8-201ENST00000265038 FAM173BQ6P4H8 233 aa9.41□□□□□ -0.9
ERCC8-201ENST00000265038 DTHD1Q6ZMT9 781 aa9.41□□□□□ -0.9
ERCC8-201ENST00000265038 FAM228AQ86W67 206 aa9.41□□□□□ -0.9
ERCC8-201ENST00000265038 LINC01599Q8WXQ3 324 aa9.41□□□□□ -0.9
ERCC8-201ENST00000265038 FAM161BQ96MY7 647 aa9.41□□□□□ -0.9
ERCC8-201ENST00000265038 ERVK-5Q9HDB9 667 aa9.41□□□□□ -0.9
ERCC8-201ENST00000265038 XPNPEP1Q9NQW7 623 aa9.41□□□□□ -0.9
ERCC8-201ENST00000265038 BMP2KQ9NSY1 1161 aaPredicted RBP9.41□□□□□ -0.9
ERCC8-201ENST00000265038 LRWD1Q9UFC0 647 aa9.41□□□□□ -0.9
ERCC8-201ENST00000265038 ST3GAL5Q9UNP4 418 aa9.41□□□□□ -0.9
ERCC8-201ENST00000265038 TMEM265A0A087WTH1 108 aa9.41□□□□□ -0.9
ERCC8-201ENST00000265038 PP2D1A8MPX8 630 aa9.41□□□□□ -0.9
ERCC8-201ENST00000265038 RPS6KA5O75582 802 aa9.41□□□□□ -0.9
ERCC8-201ENST00000265038 ARHGEF15O94989 841 aa9.41□□□□□ -0.9
ERCC8-201ENST00000265038 GJB5O95377 273 aa9.41□□□□□ -0.9
ERCC8-201ENST00000265038 AMHP03971 560 aa9.41□□□□□ -0.9
ERCC8-201ENST00000265038 CDC25AP30304 524 aa9.41□□□□□ -0.9
ERCC8-201ENST00000265038 RARRES1P49788 294 aa9.41□□□□□ -0.9
ERCC8-201ENST00000265038 DNM2P50570 870 aa9.41□□□□□ -0.9
ERCC8-201ENST00000265038 POLGP54098 1239 aaPredicted RBP9.41□□□□□ -0.9
ERCC8-201ENST00000265038 NFX1Q12986 1120 aaKnown RBP9.41□□□□□ -0.9
ERCC8-201ENST00000265038 PAK2Q13177 524 aa9.41□□□□□ -0.9
ERCC8-201ENST00000265038 FAM117BQ6P1L5 589 aa9.41□□□□□ -0.9
ERCC8-201ENST00000265038 MYOCDQ8IZQ8 938 aa9.41□□□□□ -0.9
ERCC8-201ENST00000265038 ZNF710Q8N1W2 664 aa9.41□□□□□ -0.9
ERCC8-201ENST00000265038 ERMNQ8TAM6 284 aa9.41□□□□□ -0.9
ERCC8-201ENST00000265038 SLC7A3Q8WY07 619 aa9.41□□□□□ -0.9
ERCC8-201ENST00000265038 TOP1MTQ969P6 601 aa9.41□□□□□ -0.9
ERCC8-201ENST00000265038 TMEM143Q96AN5 459 aa9.41□□□□□ -0.9
ERCC8-201ENST00000265038 JPH2Q9BR39 696 aaPredicted RBP9.41□□□□□ -0.9
ERCC8-201ENST00000265038 MMTAG2Q9BU76 263 aaKnown RBP9.41□□□□□ -0.9
ERCC8-201ENST00000265038 ZNF576Q9H609 170 aa9.41□□□□□ -0.9
ERCC8-201ENST00000265038 SCN5AQ14524 2016 aa9.4□□□□□ -0.9
ERCC8-201ENST00000265038 TRIP12Q14669 1992 aaPredicted RBP9.4□□□□□ -0.9
ERCC8-201ENST00000265038 TLL1O43897 1013 aa9.4□□□□□ -0.9
ERCC8-201ENST00000265038 MGEA5O60502 916 aa9.4□□□□□ -0.9
ERCC8-201ENST00000265038 SLC34A2O95436 690 aa9.4□□□□□ -0.9
ERCC8-201ENST00000265038 DARSP14868 501 aaKnown RBP9.4□□□□□ -0.9
ERCC8-201ENST00000265038 CCT6AP40227 531 aaKnown RBP9.4□□□□□ -0.9
ERCC8-201ENST00000265038 EMC2Q15006 297 aa9.4□□□□□ -0.9
ERCC8-201ENST00000265038 SF3A1Q15459 793 aaKnown RBP9.4□□□□□ -0.9
ERCC8-201ENST00000265038 ARL6IP4Q66PJ3 421 aaKnown RBP9.4□□□□□ -0.9
ERCC8-201ENST00000265038 POTEGQ6S5H5 508 aa9.4□□□□□ -0.9
ERCC8-201ENST00000265038 RHPN2Q8IUC4 686 aa9.4□□□□□ -0.9
ERCC8-201ENST00000265038 KSR1Q8IVT5 923 aa9.4□□□□□ -0.9
ERCC8-201ENST00000265038 EXOC8Q8IYI6 725 aa9.4□□□□□ -0.9
ERCC8-201ENST00000265038 SPRYD3Q8NCJ5 442 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms